Tab2MageExporter

Short description

From a BASE2 Experiment Item, the plugin exports the experimental metadata as a tab2mage specification compliant file.

Long description

The Tab2MageExporter plugin exports experimental metadata and annotations as a tab2mage file. The tab2mage specification is provided by the Microarray Informatics Team at the EBI, Cambridge.

The Tab2MageExporter plugin is started from the Experiment Item View Page. Hence, the user needs to create an experiment and all the annotations and parameters first. To execute the plugin, select and click on an experiment, click on the export tab and follow subsequent instructions from the wizard.

Prerequisites

Base 2.2 and above

Documentation

The ​README.txt contains information on how to install and use the plug-in.

FAQs

Maintenance plan

Bugs will be fixed.

License

​GNU General Public License version 2.

Author

Dominic Oyeniran – European Bioinformatics Institute, Cambridge, UK
​http://www.ebi.ac.uk
​Project Page
email:oyeniran@ebi.ac.uk

Philippe Rocca-Serra – European Bioinformatics Institute, Cambridge, UK, Net-Project technical coordinator.
email:rocca@ebi.ac.uk

Credits

We would like to thank:

Charles Girardot <charles.girardot@…> and Sajoscha Sauer <sauer@…> at EMBL, for the useful discussions and input.

Download

plugin jar file: ​Tab2MageExporter.jar

Dependent jar

utils jar file: ​ebi-plugins-utils.jar