= MeLuDI extension for BASE = This package is an ''extension package'' to BASE with registration wizards for melanoma-lung cancer projects, in analogy with the package "Reggie" for the SCAN-B breast cancer project. It is named "MeLuDI" after "melanoma/lung cancer diagnostics". = Documentation = * The [source:/extensions/net.sf.basedb.meludi/tags/1.5.0/README README] contains information about this package, how to install it and how to compile it. * Wiki page [wiki:net.sf.basedb.meludi.background_software_info MeLuDI Software Information] contains some background and behind-the-scene information on the software, that might be of interest if you need to complement MeLuDI by working directly against the BASE user interface. = License = [http://www.gnu.org/licenses/gpl-3.0.html GNU General Public License version 3]. = Download = || '''Version''' || '''Revision''' || '''Date''' || '''Binary (tar.gz)''' || '''BASE Version''' || '''Special notes''' || || || 1.0 || ''3030'' || ''2014-12-11'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.0.tar.gz?format=raw meludi-1.0.tar.gz] (330.8 KB) || 3.3.2 or later || Tested successfully with BASE v.3.3.2 || [query:"groupdesc=1&group=type&milestone=MeLuDi v1.0&order=priority" changelog] || || 1.1 || ''3053'' || ''2014-12-18'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.1.tar.gz?format=raw meludi-1.1.tar.gz] (325.2 KB) || 3.3.2 or later || Tested successfully with BASE v.3.3.2 || [query:"groupdesc=1&group=type&milestone=MeLuDi v1.1&order=priority" changelog] || || 1.2 || ''3191'' || ''2015-03-18'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.2.tar.gz?format=raw meludi-1.2.tar.gz] (405.7 KB) || 3.4.0 or later || [wiki:net.sf.basedb.meludi.notes1_2 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDi v1.2&order=priority" changelog] || || 1.2.1 || ''3241'' || ''2015-04-13'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.2.1.tar.gz?format=raw meludi-1.2.1.tar.gz] (426.0 KB) || 3.4.0 or later || [wiki:net.sf.basedb.meludi.notes1_2_1 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.2.1&order=priority" changelog] || || 1.2.2 || ''3257'' || ''2015-04-18'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.2.2.tar.gz?format=raw meludi-1.2.2.tar.gz] (429.2 KB) || 3.4.0 or later || [wiki:net.sf.basedb.meludi.notes1_2_2 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.2.2&order=priority" changelog] || || 1.2.3 || ''3296'' || ''2015-04-30'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.2.3.tar.gz?format=raw meludi-1.2.3.tar.gz] (435.5 KB) || 3.4.0 or later || || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.2.3&order=priority" changelog] || || 1.2.4 || ''3346'' || ''2015-05-19'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.2.4.tar.gz?format=raw meludi-1.2.4.tar.gz] (440.7 KB) || 3.4.0 or later || || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.2.4&order=priority" changelog] || || 1.2.5 || ''3371'' || ''2015-06-08'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.2.5.tar.gz?format=raw meludi-1.2.5.tar.gz] (436.0 KB) || 3.4.0 or later || || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.2.5&order=priority" changelog] || || 1.3.1 || ''3453'' || ''2015-07-28'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.3.1.tar.gz?format=raw meludi-1.3.1.tar.gz] (550.9 KB) || 3.5.0 or later || [wiki:net.sf.basedb.meludi.notes1_3_1 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.3.1&order=priority" changelog] || || 1.3.2 || ''3511'' || ''2015-09-24'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.3.2.tar.gz?format=raw meludi-1.3.2.tar.gz] (598.8 KB) || 3.5.0 or later || [wiki:net.sf.basedb.meludi.notes1_3_2 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.3.2&order=priority" changelog] || || 1.3.3 || ''3522'' || ''2015-10-01'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.3.3.tar.gz?format=raw meludi-1.3.3.tar.gz] (599.6 KB) || 3.5.0 or later || [wiki:net.sf.basedb.meludi.notes1_3_3 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.3.3&order=priority" changelog] || || 1.4.0 || ''3707'' || ''2016-01-19'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.4.0.tar.gz?format=raw meludi-1.4.0.tar.gz] (704.8 KB) || 3.7.0 or later || [wiki:net.sf.basedb.meludi.notes1_4_0 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.4.0&order=priority" changelog] || || 1.4.1 || ''3711'' || ''2016-01-20'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.4.1.tar.gz?format=raw meludi-1.4.1.tar.gz] (704.8 KB) || 3.7.0 or later || [wiki:net.sf.basedb.meludi.notes1_4_1 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.4.1&order=priority" changelog] || || 1.4.2 || ''3728'' || ''2016-02-02'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.4.2.tar.gz?format=raw meludi-1.4.2.tar.gz] (714.1 KB) || 3.7.0 or later || [wiki:net.sf.basedb.meludi.notes1_4_2 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.4.2&order=priority" changelog] || || 1.4.3 || ''3873'' || ''2016-04-22'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.4.3.tar.gz?format=raw meludi-1.4.3.tar.gz] (713.0 KB) || 3.7.0 or later || [wiki:net.sf.basedb.meludi.notes1_4_3 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.4.3&order=priority" changelog] || || 1.5.0 || ''4695'' || ''2018-03-15'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.5.0.tar.gz?format=raw meludi-1.5.0.tar.gz] (746.4 KB) || 3.7.0 or later || [wiki:net.sf.basedb.meludi.notes1_5_0 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.5.0&order=priority" changelog] || || 1.6.0 || ''6808'' || ''2022-08-24'' || [attachment:wiki:net.sf.basedb.meludi:meludi-1.5.0.tar.gz?format=raw meludi-1.5.0.tar.gz] (746.4 KB) || 3.15.0 or later || [wiki:net.sf.basedb.meludi.notes1_6_0 update notes] || [query:"groupdesc=1&group=type&milestone=MeLuDI v1.6.0&order=priority" changelog] || The latest development (''maybe unstable; do not use on a production server'') revision can be checked out from the repository using the following command: `svn co https://baseplugins.thep.lu.se/svn/extensions/net.sf.basedb.meludi/trunk meludi-devel` === Contribute === After making modifications to the source code, compose a clear and concise log message to describe those changes and the reasons for them. Then, send an email to the developers list containing your log message and the output of svn diff (from the top of your subversion working copy). If the community members consider your changes acceptable, someone who has commit privileges will add your changes to the public source code tree. Recall that permission to directly commit changes to the repository is granted on merit - if you demonstrate comprehension of subversion, programming competency, and a ''team spirit'', you will likely be awarded that permission. === Project update === On 2016-01-21 it was announced that the parent project using the MeLuDI software would not be continued after midsummer 2016, since another laboratory should perform the analyses in question. It was decided to update the software with fixes and features already agreed upon at the time of the announcement, and release MeLuDI v1.4.2 directly after the latter updates had been tested. Further updates of the MeLuDI software will be related to use of the latter in other projects, with a laboratory pipeline similar to the original "MeLuDI" project. === Todo === [[TicketQuery(status!=closed&component=net.sf.basedb.meludi)]]