Timeline
Sep 1, 2023:
- 11:29 AM Ticket #1515 (Pick up the "Non-aberrant" flag from ASCAT result and import as an ...) updated by
- In 7327: […]
- 11:29 AM Changeset [7327] by
- References #1515: Pick up the "Non-aberrant" flag from ASCAT result …
Aug 31, 2023:
- 8:38 PM Ticket #1515 (Pick up the "Non-aberrant" flag from ASCAT result and import as an ...) updated by
- In 7326: […]
- 8:38 PM Changeset [7326] by
- References #1515: Pick up the "Non-aberrant" flag from ASCAT result …
- 7:29 PM Ticket #1515 (Pick up the "Non-aberrant" flag from ASCAT result and import as an ...) updated by
- In 7325: […]
- 7:29 PM Changeset [7325] by
- References #1515: Pick up the "Non-aberrant" flag from ASCAT result …
- 7:11 PM Ticket #1515 (Pick up the "Non-aberrant" flag from ASCAT result and import as an ...) updated by
- In 7324: […]
- 7:11 PM Changeset [7324] by
- References #1515: Pick up the "Non-aberrant" flag from ASCAT result …
- 6:47 PM Ticket #1515 (Pick up the "Non-aberrant" flag from ASCAT result and import as an ...) created by
- 2:05 PM Ticket #1512 (Limit the number of threads used by allelecounter) updated by
- In 7323: […]
- 2:05 PM Changeset [7323] by
- References #1512: Limit the number of threads used by allelecounter …
- 9:27 AM Ticket #1514 (Display information about parent alignments in the ASCAT confirmation ...) closed by
- fixed: In 7322: […]
- 9:27 AM Changeset [7322] by
- Fixes #1514: Display information about parent alignments in the ASCAT …
Aug 30, 2023:
- 2:58 PM Ticket #1514 (Display information about parent alignments in the ASCAT confirmation ...) created by
- It would be useful to have the number of aligned reads, coverage and …
- 2:56 PM Ticket #1513 (Add link to the case summary in the ASCAT confirmation wizard) closed by
- fixed: In 7321: […]
- 2:56 PM Changeset [7321] by
- Fixes #1513: Add link to the case summary in the ASCAT confirmation wizard
- 2:56 PM Ticket #1513 (Add link to the case summary in the ASCAT confirmation wizard) created by
- 2:40 PM Ticket #1512 (Limit the number of threads used by allelecounter) closed by
- fixed: In 7320: […]
- 2:40 PM Changeset [7320] by
- Fixes #1512: Limit the number of threads used by allelecounter We now …
- 2:39 PM Ticket #1512 (Limit the number of threads used by allelecounter) created by
- The default settings for the ASCAT analysis is to use 8 cores since …
- 2:34 PM Ticket #1511 (Increase the delay between ASCAT jobs) closed by
- fixed: In 7319: […]
- 2:34 PM Changeset [7319] by
- Fixes #1511: Increase the delay between ASCAT jobs Increased the …
- 9:14 AM Ticket #1511 (Increase the delay between ASCAT jobs) created by
- When submitting multiple jobs to the cluster there is a default delay …
- 9:07 AM Changeset [7318] by
- Creating bugfix branch for Reggie 4.49
Aug 29, 2023:
- 11:13 AM Changeset [7317] by
- Changes for future release Reggie 4.50
- 11:12 AM Milestone Reggie v4.49 completed
- See Reggie extension page for more information.
- 11:11 AM PluginDownload edited by
- Released Reggie 4.49 (diff)
- 11:10 AM net.sf.basedb.reggie edited by
- Released Reggie 4.49 (diff)
- 11:08 AM Ticket #1500 (Implement ASCAT analysis for WGS data) closed by
- fixed
- 11:06 AM Changeset [7316] by
- Tagging Reggie 4.49
- 11:05 AM Changeset [7315] by
- Preparing to release Reggie 4.49
- 9:58 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7314: […]
- 9:58 AM Changeset [7314] by
- References #1500: Implement ASCAT analysis for WGS data Do not …
- 9:23 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7313: […]
- 9:23 AM Changeset [7313] by
- References #1500: Implement ASCAT analysis for WGS data Modified the …
- 9:08 AM Ticket #1510 (Add a "View file" action to the remote file browser used in several of ...) closed by
- fixed: In 7312: […]
- 9:08 AM Changeset [7312] by
- Fixes #1510: Add a "View file" action to the remote file browser used …
- 8:31 AM Ticket #1510 (Add a "View file" action to the remote file browser used in several of ...) created by
- This dialog can currently download the files, and since #1476 also …
Aug 28, 2023:
- 11:45 AM Changeset [7311] by
- Changes for future release External files support 1.8
- 11:43 AM Milestone External files support 1.7 completed
- An extension package containing support for additional protocols to …
- 11:43 AM PluginDownload edited by
- Released External files support 1.7 (diff)
- 11:42 AM net.sf.basedb.xfiles edited by
- Released External files support 1.7 (diff)
- 11:39 AM Changeset [7310] by
- Tagging External files support 1.7
- 11:39 AM Changeset [7309] by
- Preparing to release External files support 1.7
- 11:37 AM Ticket #1505 (Add new sections for DNA demuxed and aligned items in the case summary) closed by
- fixed: In 7308: […]
- 11:37 AM Changeset [7308] by
- Fixes #1505: Add new sections for DNA demuxed and aligned items in the …
- 11:25 AM net.sf.basedb.varsearch/using edited by
- Clarification about chromosome names (diff)
- 11:23 AM Changeset [7307] by
- Changes for future release Variant Search 1.10
- 11:22 AM PluginDownload edited by
- Released Variant Search 1.9 (diff)
- 11:18 AM Tickets #1508,1509 batch updated by
-
Milestone changed
Milestone renamed - 11:18 AM net.sf.basedb.varsearch edited by
- Released Variant Search 1.9 (diff)
- 11:17 AM Milestone Variant Search v1.9 completed
- See Variant Search extension page for …
- 11:14 AM Changeset [7306] by
- Tagging Variant Search 1.9
- 11:14 AM Changeset [7305] by
- Preparing to release Variant search 1.9
- 9:52 AM Ticket #1509 (Improve searching for variants on chrM) closed by
- fixed: In 7304: […]
- 9:52 AM Changeset [7304] by
- Fixes #1509: Improve searching for variants on chrM It is now …
- 9:05 AM Ticket #1509 (Improve searching for variants on chrM) created by
- Normally when searching for variants on a specific chromosome it is …
- 9:00 AM Ticket #1508 (Use Apache Commons Compress instead of builtin GZIPInputStream) closed by
- fixed: In 7303: […]
- 9:00 AM Changeset [7303] by
- Fixes #1508: Use Apache Commons Compress instead of builtin …
- 8:47 AM Ticket #1508 (Use Apache Commons Compress instead of builtin GZIPInputStream) updated by
- In 7302: […]
- 8:47 AM Changeset [7302] by
- References #1508: Use Apache Commons Compress instead of builtin …
Aug 25, 2023:
- 2:35 PM Ticket #1508 (Use Apache Commons Compress instead of builtin GZIPInputStream) created by
- One of our servers is running with Java 11 (OpenJDK Runtime …
- 12:55 PM Ticket #1507 (Load metadata for files when opening the input stream) closed by
- fixed: In 7301: […]
- 12:55 PM Changeset [7301] by
- Fixes #1507: Load metadata for files when opening the input stream
- 11:59 AM Ticket #1506 (Update to SSHj 0.35) closed by
- fixed: In 7300: […]
- 11:59 AM Changeset [7300] by
- Fixes #1506: Update to SSHj 0.35
- 11:50 AM Ticket #1507 (Load metadata for files when opening the input stream) created by
- When BASE is opening a file for download in the …
- 11:45 AM Ticket #1506 (Update to SSHj 0.35) created by
Aug 24, 2023:
- 8:34 AM Ticket #1505 (Add new sections for DNA demuxed and aligned items in the case summary) created by
- The DNA and RNA demuxed items and alignments are currently displayed …
- 8:31 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7299: […]
- 8:31 AM Changeset [7299] by
- References #1500: Implement ASCAT analysis for WGS data Added a small …
- 8:30 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7298: […]
- 8:30 AM Changeset [7298] by
- References #1500: Implement ASCAT analysis for WGS data Added …
Aug 23, 2023:
- 3:35 PM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7297: […]
- 3:35 PM Changeset [7297] by
- References #1500: Implement ASCAT analysis for WGS data Minor …
- 3:34 PM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7296: […]
- 3:34 PM Changeset [7296] by
- References #1500: Implement ASCAT analysis for WGS data Added ASCAT …
- 1:35 PM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7295: […]
- 1:35 PM Changeset [7295] by
- References #1500: Implement ASCAT analysis for WGS data Use preset …
- 11:20 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7294: […]
- 11:20 AM Changeset [7294] by
- References #1500: Implement ASCAT analysis for WGS data Tumor …
Aug 22, 2023:
- 4:08 PM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7293: […]
- 4:08 PM Changeset [7293] by
- References #1500: Implement ASCAT analysis for WGS data Started to …
Aug 21, 2023:
- 12:02 PM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7292: […]
- 12:02 PM Changeset [7292] by
- References #1500: Implement ASCAT analysis for WGS data Added a …
- 11:30 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7291: […]
- 11:30 AM Changeset [7291] by
- References #1500: Implement ASCAT analysis for WGS data Added the …
Aug 18, 2023:
- 1:33 PM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7290: […]
- 1:33 PM Changeset [7290] by
- References #1500: Implement ASCAT analysis for WGS data Disabled the …
- 9:13 AM net.sf.basedb.inca edited by
- Added ZIP file (diff)
- 8:39 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7289: […]
- 8:39 AM Changeset [7289] by
- References #1500: Implement ASCAT analysis for WGS data Started to …
Aug 16, 2023:
- 9:54 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7288: […]
- 9:54 AM Changeset [7288] by
- References #1500: Implement ASCAT analysis for WGS data Added the …
Aug 15, 2023:
- 1:41 PM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7287: […]
- 1:41 PM Changeset [7287] by
- References #1500: Implement ASCAT analysis for WGS data Implemented …
- 9:53 AM Changeset [7286] by
- Merge Reggie 4.48.5 to the trunk
- 9:50 AM Milestone Reggie v4.48.5 completed
- Bug fixes and enhancements for Reggie 4.48.4. Revision Log: …
- 9:49 AM net.sf.basedb.reggie edited by
- Released Reggie 4.48.5 (diff)
- 9:46 AM Changeset [7285] by
- Tagging Reggie 4.48.5
- 9:46 AM Changeset [7284] by
- Preparing to release Reggie 4.48.5
- 9:44 AM Ticket #1504 (Allow longer PAD values in JSON files) closed by
- fixed: In 7283: […]
- 9:44 AM Changeset [7283] by
- Fixes #1504: Allow longer PAD values in JSON files Changed the PAD …
- 9:05 AM Ticket #1503 (Missing results in the Genotype QC wizard) closed by
- fixed: In 7282: […]
- 9:05 AM Changeset [7282] by
- Fixes #1503: Missing results in the Genotype QC wizard
- 9:01 AM Ticket #1504 (Allow longer PAD values in JSON files) created by
- The PAD values is currently limited to 20 characters. There are cases …
- 8:55 AM Ticket #1503 (Missing results in the Genotype QC wizard) created by
- When running the Genotype QC wizard the results for some alignments …
Aug 14, 2023:
- 8:53 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7281: […]
- 8:53 AM Changeset [7281] by
- References #1500: Implement ASCAT analysis for WGS data Rename result …
- 8:53 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7280: […]
- 8:53 AM Changeset [7280] by
- References #1500: Implement ASCAT analysis for WGS data Generate a …
Aug 11, 2023:
- 11:14 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7279: […]
- 11:14 AM Changeset [7279] by
- References #1500: Implement ASCAT analysis for WGS data Added support …
Aug 10, 2023:
- 8:25 AM Ticket #1500 (Implement ASCAT analysis for WGS data) updated by
- In 7278: […]
- 8:25 AM Changeset [7278] by
- References #1500: Implement ASCAT analysis for WGS data Modified the …
Aug 8, 2023:
- 9:45 AM Ticket #1501 (Library concentration can be measured with Quant-IT instead of Qubit) closed by
- fixed
- 9:18 AM Ticket #1502 (Increase the limit for warning about a high number of reads) closed by
- fixed: In 7277: […]
- 9:18 AM Changeset [7277] by
- Fixes #1502: Increase the limit for warning about a high number of reads
- 9:05 AM Ticket #1502 (Increase the limit for warning about a high number of reads) created by
- It happens quite often that the number of reads for a sample is more …
- 8:56 AM Ticket #1501 (Library concentration can be measured with Quant-IT instead of Qubit) updated by
- In 7276: […]
- 8:56 AM Changeset [7276] by
- References #1501: Library concentration can be measured with Quant-IT …
- 8:44 AM Ticket #1501 (Library concentration can be measured with Quant-IT instead of Qubit) updated by
- In 7275: […]
- 8:44 AM Changeset [7275] by
- References #1501: Library concentration can be measured with Quant-IT …
Aug 7, 2023:
- 2:55 PM Ticket #1501 (Library concentration can be measured with Quant-IT instead of Qubit) updated by
- In 7274: […]
- 2:55 PM Changeset [7274] by
- References #1501: Library concentration can be measured with Quant-IT …
- 2:00 PM Ticket #1501 (Library concentration can be measured with Quant-IT instead of Qubit) updated by
- In 7273: […]
- 2:00 PM Changeset [7273] by
- References #1501: Library concentration can be measured with Quant-IT …
- 12:03 PM Ticket #1501 (Library concentration can be measured with Quant-IT instead of Qubit) created by
- The Quant-IT values are submitted in the "QuantIT concentration …
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