Timeline
Jun 7, 2023:
- 2:44 PM Changeset [7246] by
- Merge Reggie 4.48.1 to the trunk
- 2:43 PM net.sf.basedb.reggie edited by
- (diff)
- 2:40 PM Changeset [7245] by
- Tagging Reggie 4.48.1 (second try)
- 2:39 PM Changeset [7244] by
- Removing tag since it the fix for #1494 was not included.
- 2:38 PM Ticket #1494 (The JSON file when importing is attached to the ImportGateway instead ...) updated by
- In 7243: […]
- 2:38 PM Changeset [7243] by
- References #1494: The JSON file when importing is attached to the …
- 2:30 PM net.sf.basedb.reggie edited by
- Released Reggie 4.48.1 (diff)
- 2:27 PM Changeset [7242] by
- Tagging Reggie 4.48.1
- 2:27 PM Changeset [7241] by
- Preparing to release Reggie 4.48.1
- 2:26 PM Ticket #1494 (The JSON file when importing is attached to the ImportGateway instead ...) closed by
- fixed: In 7240: […]
- 2:26 PM Changeset [7240] by
- Fixes #1494: The JSON file when importing is attached to the …
- 2:24 PM Ticket #1493 (Imported item have SCAN-B id with 6 digits) closed by
- fixed: In 7239: […]
- 2:24 PM Changeset [7239] by
- Fixes #1493: Imported item have SCAN-B id with 6 digits The mistake …
- 2:22 PM Changeset [7238] by
- Creating bugfix branch for Reggie 4.48
- 2:19 PM Ticket #1494 (The JSON file when importing is attached to the ImportGateway instead ...) created by
- There seems to be an incorrect fix in the auto-import functionality …
- 2:15 PM Ticket #1493 (Imported item have SCAN-B id with 6 digits) created by
- There seems to be a bug in the fix for #1492 that remove an extra …
- 1:15 PM Changeset [7237] by
- Changes for future release Reggie 4.49
- 1:13 PM Milestone Reggie v4.48 completed
- See Reggie extension page for more information.
- 1:13 PM net.sf.basedb.reggie edited by
- Released Reggie 4.48 (diff)
- 1:09 PM Changeset [7236] by
- Tagging Reggie 4.48
- 1:09 PM Changeset [7235] by
- Preparing to release Reggie 4.48
- 1:06 PM Tickets #1483,1487,1488,1491 batch updated by
- fixed
- 1:06 PM Ticket #1490 (Switch to BASE 3.19.9) closed by
- fixed: Fixed in [7222].
- 1:05 PM Ticket #190 (net.sf.basedb.normalizers: Add target that tries to build qQN if requested) updated by
- Replying to Nicklas Nordborg: > In [changeset:"7222" …
Jun 2, 2023:
- 3:23 PM Ticket #1492 (Ignore 'T' suffix in SCAN-B ID when importing JSON or external specimen) closed by
- fixed: In 7234: […]
- 3:23 PM Changeset [7234] by
- Fixes #1492: Ignore 'T' suffix in SCAN-B ID when importing JSON or …
- 3:22 PM Ticket #1492 (Ignore 'T' suffix in SCAN-B ID when importing JSON or external specimen) created by
- The 'T' suffix is used for frozen samples and we should normally not …
- 2:21 PM Ticket #1491 (Add support for importing JSON after sample tubes have been delivered) updated by
- In 7233: […]
- 2:21 PM Changeset [7233] by
- References #1491: Add support for importing JSON after sample tubes …
- 1:57 PM Ticket #1491 (Add support for importing JSON after sample tubes have been delivered) updated by
- In 7232: […]
- 1:57 PM Changeset [7232] by
- References #1491: Add support for importing JSON after sample tubes …
- 12:58 PM Ticket #1491 (Add support for importing JSON after sample tubes have been delivered) updated by
- In 7231: […]
- 12:58 PM Changeset [7231] by
- References #1491: Add support for importing JSON after sample tubes …
- 11:52 AM Ticket #1491 (Add support for importing JSON after sample tubes have been delivered) updated by
- In 7230: […]
- 11:52 AM Changeset [7230] by
- References #1491: Add support for importing JSON after sample tubes …
- 11:28 AM Ticket #1491 (Add support for importing JSON after sample tubes have been delivered) updated by
- In 7229: […]
- 11:28 AM Changeset [7229] by
- References #1491: Add support for importing JSON after sample tubes …
- 10:41 AM Ticket #1491 (Add support for importing JSON after sample tubes have been delivered) created by
- In ticket #1480 we implemented transfer of samples tubes. In most …
Jun 1, 2023:
- 4:19 PM Ticket #1488 (Auto-import JSON files) updated by
- In 7228: […]
- 4:19 PM Changeset [7228] by
- References #1488: Auto-import JSON files Implemented support for …
- 2:41 PM Ticket #1488 (Auto-import JSON files) updated by
- In 7227: […]
- 2:41 PM Changeset [7227] by
- References #1488: Auto-import JSON files Enabled the …
- 2:00 PM Ticket #1488 (Auto-import JSON files) updated by
- In 7226: […]
- 2:00 PM Changeset [7226] by
- References #1488: Auto-import JSON files Implemented the actual …
May 31, 2023:
- 7:00 PM Ticket #1488 (Auto-import JSON files) updated by
- In 7225: […]
- 7:00 PM Changeset [7225] by
- References #1488: Auto-import JSON files Implemented a way to specify …
- 4:00 PM Ticket #1488 (Auto-import JSON files) updated by
- In 7224: […]
- 4:00 PM Changeset [7224] by
- References #1488: Auto-import JSON files Added FilesToIgnore …
- 3:46 PM Ticket #1488 (Auto-import JSON files) updated by
- In 7223: […]
- 3:45 PM Changeset [7223] by
- References #1488: Auto-import JSON files Added support for the …
- 2:50 PM Ticket #190 (net.sf.basedb.normalizers: Add target that tries to build qQN if requested) updated by
- In 7222: […]
- 2:50 PM Changeset [7222] by
- Fixes #190: Switch to BASE 3.19.9
- 2:50 PM Ticket #1490 (Switch to BASE 3.19.9) updated by
-
Summary changed
- 2:49 PM Ticket #1490 (Switch to BASE 3.19.9) created by
- We need the support for annotating file server items (see #1488 and …
- 1:36 PM Ticket #1488 (Auto-import JSON files) updated by
- In 7221: […]
- 1:35 PM Changeset [7221] by
- References #1488: Auto-import JSON files Started to implement an …
- 8:50 AM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7220: […]
- 8:50 AM Changeset [7220] by
- References #1487: Implement a new Genotype QC wizard for validating …
- 7:43 AM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7219: […]
- 7:43 AM Changeset [7219] by
- References #1487: Implement a new Genotype QC wizard for validating …
May 30, 2023:
- 2:53 PM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7218: […]
- 2:53 PM Changeset [7218] by
- References #1487: Implement a new Genotype QC wizard for validating …
- 1:06 PM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7217: […]
- 1:06 PM Changeset [7217] by
- References #1487: Implement a new Genotype QC wizard for validating …
- 11:44 AM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7216: […]
- 11:44 AM Changeset [7216] by
- References #1487: Implement a new Genotype QC wizard for validating …
- 9:28 AM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7215: […]
- 9:28 AM Changeset [7215] by
- References #1487: Implement a new Genotype QC wizard for validating …
May 29, 2023:
- 9:51 PM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7214: […]
- 9:51 PM Changeset [7214] by
- References #1483: Add support for using the WGS blood items in the …
- 9:36 PM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7213: […]
- 9:36 PM Changeset [7213] by
- References #1487: Implement a new Genotype QC wizard for validating …
- 9:33 PM Tickets #1483,1487 batch updated by
- In 7212: […]
- 9:33 PM Changeset [7212] by
- References #1483 and #1487. Implemented support for multi-threading …
- 1:15 PM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) updated by
- In 7211: […]
- 1:15 PM Changeset [7211] by
- References #1487: Implement a new Genotype QC wizard for validating …
- 9:42 AM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7210: […]
- 9:42 AM Changeset [7210] by
- References #1483: Add support for using the WGS blood items in the …
May 26, 2023:
- 1:41 PM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7209: […]
- 1:41 PM Changeset [7209] by
- References #1483: Add support for using the WGS blood items in the …
- 1:38 PM Milestone Reggie v4.47.1 completed
- Bug fixes and enhancements for Reggie 4.47. Revision Log: …
- 11:51 AM Changeset [7208] by
- Merge Reggie 4.47.1 to the trunk
- 11:49 AM net.sf.basedb.reggie edited by
- Released Reggie 4.47.1 (diff)
- 11:46 AM Changeset [7207] by
- Tagging Reggie 4.47.1
- 11:46 AM Changeset [7206] by
- Preparing to release Reggie 4.47.1
- 11:40 AM Ticket #1489 (Include remaining quantity in lab protocols for moving external samples) closed by
- fixed: In 7205: […]
- 11:40 AM Changeset [7205] by
- Fixes #1489: Include remaining quantity in lab protocols for moving …
- 11:10 AM Changeset [7204] by
- Creating bugfix branch for Reggie 4.47
- 9:59 AM Ticket #1489 (Include remaining quantity in lab protocols for moving external samples) created by
- In the specimen boxes there are several empty tubes. This is expected …
May 25, 2023:
- 11:52 AM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7203: […]
- 11:52 AM Changeset [7203] by
- References #1483: Add support for using the WGS blood items in the …
- 11:51 AM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7202: […]
- 11:51 AM Changeset [7202] by
- References #1483: Add support for using the WGS blood items in the …
- 11:29 AM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7201: […]
- 11:29 AM Changeset [7201] by
- References #1483: Add support for using the WGS blood items in the …
- 10:58 AM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7200: […]
- 10:58 AM Changeset [7200] by
- References #1483: Add support for using the WGS blood items in the …
- 9:57 AM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
- In 7199: […]
- 9:57 AM Changeset [7199] by
- References #1483: Add support for using the WGS blood items in the …
May 24, 2023:
- 1:16 PM Ticket #1488 (Auto-import JSON files) created by
- The flow of JSON files is working pretty well at the moment. It should …
- 1:14 PM Ticket #1483 (Add support for using the WGS blood items in the Genotype QC wizard) updated by
-
Milestone changed
- 1:14 PM Ticket #1487 (Implement a new Genotype QC wizard for validating WGS data) created by
- This is related to #1483. But before the WGS data can be used in the …
- 7:27 AM Milestone Reggie v4.47 completed
- See Reggie extension page for more information.
- 7:27 AM Changeset [7198] by
- Changes for future release Reggie 4.48
- 7:25 AM PluginDownload edited by
- Released Reggie 4.47 (diff)
- 7:25 AM net.sf.basedb.reggie edited by
- Released Reggie 4.47 (diff)
- 7:18 AM Changeset [7197] by
- Tagging Reggie 4.47
- 7:17 AM Changeset [7196] by
- Preparing to release Reggie 4.47
- 7:15 AM Tickets #1478,1479,1480,1481,1482 batch updated by
- fixed
- 7:13 AM Ticket #1482 (Registration wizard for moving tubes between a transport box and a ...) updated by
- In 7195: […]
- 7:13 AM Changeset [7195] by
- References #1482: Registration wizard for moving tubes between a …
May 23, 2023:
- 2:14 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7194: […]
- 2:14 PM Changeset [7194] by
- References #1480: Create import wizard for transfer of external …
- 1:19 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7193: […]
- 1:19 PM Changeset [7193] by
- References #1480: Create import wizard for transfer of external …
- 1:17 PM Ticket #1481 (Lab protocol for moving samples between transport and storage boxes) updated by
- In 7192: […]
- 1:17 PM Changeset [7192] by
- References #1481: Lab protocol for moving samples between transport …
- 9:56 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7191: […]
- 9:56 AM Changeset [7191] by
- References #1480: Create import wizard for transfer of external …
- 7:48 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7190: […]
- 7:48 AM Changeset [7190] by
- References #1480: Create import wizard for transfer of external …
May 22, 2023:
- 2:57 PM Ticket #1481 (Lab protocol for moving samples between transport and storage boxes) updated by
- In 7189: […]
- 2:57 PM Changeset [7189] by
- References #1481: Lab protocol for moving samples between transport …
- 2:53 PM Ticket #1479 (Add support for creating storage boxes for externally process samples) updated by
- In 7188: […]
- 2:53 PM Changeset [7188] by
- References #1479: Add support for creating storage boxes for …
- 1:38 PM Tickets #1481,1482 batch updated by
- In 7187: […]
- 1:38 PM Changeset [7187] by
- References #1481 and #1482. Use MoveDate as a filter when selecting …
- 1:34 PM Changeset [7186] by
- References #1482: Registration wizard for moving tubes between a …
- 9:54 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7185: […]
- 9:54 AM Changeset [7185] by
- References #1480: Create import wizard for transfer of external …
- 9:10 AM Ticket #1482 (Registration wizard for moving tubes between a transport box and a ...) updated by
- In 7184: […]
- 9:10 AM Changeset [7184] by
- References #1482: Registration wizard for moving tubes between a …
May 17, 2023:
- 2:21 PM Changeset [7183] by
- Merge Reggie 4.46.1 to the trunk
- 2:18 PM Milestone Reggie v4.46.1 completed
- Bug fixes and enhancements for Reggie 4.46. Revision Log: …
- 2:17 PM net.sf.basedb.reggie edited by
- Released Reggie 4.46.1 (diff)
- 2:15 PM Changeset [7182] by
- Tagging Reggie 4.46.1
- 2:14 PM Changeset [7181] by
- Preparing to release Reggie 4.46.1
- 2:13 PM Ticket #1486 (Add an option to run the older bwa-mem instead of bwa-mem2) updated by
- In 7180: […]
- 2:13 PM Changeset [7180] by
- References #1486: Add an option to run the older bwa-mem instead of …
- 2:10 PM Ticket #1486 (Add an option to run the older bwa-mem instead of bwa-mem2) closed by
- fixed
- 1:54 PM Ticket #1486 (Add an option to run the older bwa-mem instead of bwa-mem2) updated by
- In 7179: […]
- 1:54 PM Changeset [7179] by
- References #1486: Add an option to run the older bwa-mem instead of …
- 1:43 PM Ticket #1486 (Add an option to run the older bwa-mem instead of bwa-mem2) updated by
- In 7178: […]
- 1:43 PM Changeset [7178] by
- References #1486: Add an option to run the older bwa-mem instead of …
- 10:50 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7177: […]
- 10:50 AM Changeset [7177] by
- References #1480: Create import wizard for transfer of external …
- 9:48 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7176: […]
- 9:48 AM Changeset [7176] by
- References #1480: Create import wizard for transfer of external …
- 9:00 AM Ticket #1481 (Lab protocol for moving samples between transport and storage boxes) updated by
- In 7175: […]
- 9:00 AM Changeset [7175] by
- References #1481: Lab protocol for moving samples between transport …
- 8:26 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7174: […]
- 8:26 AM Changeset [7174] by
- References #1480: Create import wizard for transfer of external …
- 7:45 AM Changeset [7173] by
- References #1481: Lab protocol for moving samples between transport …
May 16, 2023:
- 2:58 PM Ticket #1405 (Get rid of code using the window.event object) updated by
- In 7172: […]
- 2:58 PM Changeset [7172] by
- References #1405: Add a link to view the JSON file for specimen that …
May 15, 2023:
- 8:38 AM Changeset [7171] by
- 8:36 AM Ticket #1481 (Lab protocol for moving samples between transport and storage boxes) updated by
-
Summary changed
- 7:43 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7170: […]
- 7:43 AM Changeset [7170] by
- References #1480: Create import wizard for transfer of external …
May 12, 2023:
- 1:19 PM Changeset [7169] by
- Creating bugfix branch for Reggie 4.46
- 1:03 PM Ticket #1486 (Add an option to run the older bwa-mem instead of bwa-mem2) created by
- There are some issues with bwa-mem2 that causes it to crash. It is …
- 11:32 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7168: […]
- 11:32 AM Changeset [7168] by
- References #1480: Create import wizard for transfer of external …
- 9:59 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7167: […]
- 9:59 AM Changeset [7167] by
- References #1480: Create import wizard for transfer of external …
- 9:46 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7166: […]
- 9:46 AM Changeset [7166] by
- References #1480: Create import wizard for transfer of external …
- 9:12 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7165: […]
- 9:12 AM Changeset [7165] by
- References #1480: Create import wizard for transfer of external …
- 8:51 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7164: […]
- 8:51 AM Changeset [7164] by
- References #1480: Create import wizard for transfer of external …
- 8:33 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7163: […]
- 8:33 AM Changeset [7163] by
- References #1480: Create import wizard for transfer of external …
- 8:29 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7162: […]
- 8:29 AM Changeset [7162] by
- References #1480: Create import wizard for transfer of external …
May 11, 2023:
- 2:43 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7161: […]
- 2:43 PM Changeset [7161] by
- References #1480: Create import wizard for transfer of external …
- 9:32 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7160: […]
- 9:32 AM Changeset [7160] by
- References #1480: Create import wizard for transfer of external …
- 9:01 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7159: […]
- 9:01 AM Changeset [7159] by
- References #1480: Create import wizard for transfer of external …
May 10, 2023:
- 1:27 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7158: […]
- 1:27 PM Changeset [7158] by
- References #1480: Create import wizard for transfer of external …
- 7:58 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7157: […]
- 7:58 AM Changeset [7157] by
- References #1480: Create import wizard for transfer of external …
- 7:46 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7156: […]
- 7:46 AM Changeset [7156] by
- References #1480: Create import wizard for transfer of external …
- 7:39 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7155: […]
- 7:39 AM Changeset [7155] by
- References #1480: Create import wizard for transfer of external …
May 9, 2023:
- 9:00 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7154: […]
- 9:00 AM Changeset [7154] by
- References #1480: Create import wizard for transfer of external …
- 8:56 AM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7153: […]
- 8:56 AM Changeset [7153] by
- References #1480: Create import wizard for transfer of external …
- 8:54 AM Ticket #1484 (Add support for searching on the ExternalRef annotation in the Case summary) updated by
- In 7152: […]
- 8:54 AM Changeset [7152] by
- References #1484: Add support for searching on the ExternalRef …
- 8:49 AM Ticket #1485 (Add a link to view the JSON file for specimen that has been imported ...) closed by
- fixed: In 7151: […]
- 8:49 AM Changeset [7151] by
- Fixes #1485: Add a link to view the JSON file for specimen that has …
- 8:37 AM Ticket #1485 (Add a link to view the JSON file for specimen that has been imported ...) created by
- 8:15 AM Ticket #1484 (Add support for searching on the ExternalRef annotation in the Case summary) closed by
- fixed: In 7150: […]
- 8:15 AM Changeset [7150] by
- Fixes #1484: Add support for searching on the ExternalRef annotation …
- 7:35 AM Ticket #1484 (Add support for searching on the ExternalRef annotation in the Case summary) created by
May 8, 2023:
- 4:40 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7149: […]
- 4:40 PM Changeset [7149] by
- References #1480: Create import wizard for transfer of external …
- 4:40 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7148: […]
- 4:40 PM Changeset [7148] by
- References #1480: Create import wizard for transfer of external …
- 2:21 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7147: […]
- 2:21 PM Changeset [7147] by
- References #1480: Create import wizard for transfer of external …
- 2:19 PM Ticket #1480 (Create import wizard for transfer of external samples) updated by
- In 7146: […]
- 2:19 PM Changeset [7146] by
- References #1480: Create import wizard for transfer of external …
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