Timeline
Apr 28, 2022:
- 9:43 AM Ticket #1391 (Implement a way to insert a "Reggie was updated..." log entry when ...) closed by
- fixed: In 6713: […]
- 9:43 AM Changeset [6713] by
- Fixes #1391: Implement a way to insert a "Reggie was updated..." log …
- 9:07 AM Ticket #1392 (The default configuration is missing a JAVA_HOME declaration in the ...) closed by
- fixed: In 6712: […]
- 9:07 AM Changeset [6712] by
- Fixes #1392: The default configuration is missing a JAVA_HOME …
- 9:05 AM Ticket #1392 (The default configuration is missing a JAVA_HOME declaration in the ...) created by
- Without this, vardict is selecting the first java that it can find on …
Apr 27, 2022:
- 2:55 PM Ticket #1391 (Implement a way to insert a "Reggie was updated..." log entry when ...) created by
- The "Installation wizard" can always be used to check if a new Reggie …
- 2:50 PM Ticket #1390 (Updates to wizards that assume tubes are marked with item name) created by
- Samples that have been handled externally and then transferred to the …
- 2:41 PM Changeset [6711] by
- References #1388: Updates to registration of specimen handled by …
- 11:48 AM Changeset [6710] by
- References #1388: Updates to registration of specimen handled by …
- 11:36 AM Changeset [6709] by
- References #1388: Updates to registration of specimen handled by …
- 11:04 AM Changeset [6708] by
- Changes for future release Job scheduler 1.7
- 11:03 AM Milestone Job scheduler extension v1.6 completed
- See the Job scheduler extension page for …
- 11:02 AM net.sf.basedb.opengrid edited by
- Released Job scheduler extension 1.6 (diff)
- 10:58 AM Changeset [6707] by
- Tagging Job scheduler 1.6
- 10:57 AM Changeset [6706] by
- Preparing to release Job scheduler 1.6
- 9:46 AM Ticket #1389 (TMPDIR is re-defined twice when starting jobs) closed by
- fixed: In 6705: […]
- 9:46 AM Changeset [6705] by
- Fixes #1389: TMPDIR is re-defined twice when starting jobs No …
- 9:37 AM Ticket #1389 (TMPDIR is re-defined twice when starting jobs) created by
- I found a problem when a cluster was configured with default value for …
Apr 26, 2022:
- 2:42 PM Changeset [6704] by
- References #1388: Updates to registration of specimen handled by …
- 1:45 PM Changeset [6703] by
- References #1388: Updates to registration of specimen handled by …
- 1:38 PM Changeset [6702] by
- References #1388: Updates to registration of specimen handled by …
- 1:19 PM Changeset [6701] by
- References #1388: Updates to registration of specimen handled by …
- 11:32 AM Ticket #1388 (Updates to registration of specimen handled by external lab) created by
- There is a new test file with some changes that should take us a bit …
- 10:33 AM Ticket #1364 (Update to BASE 3.19) closed by
- fixed
- 10:32 AM Changeset [6700] by
- References #1365: Update to Lucene 9 Display Lucene version on the …
- 9:37 AM Ticket #1365 (Update to Lucene 9) closed by
- fixed: In 6699: […]
- 9:37 AM Changeset [6699] by
- Fixes #1365: Update to Lucene 9 Updated to Lucene 9.1
Apr 25, 2022:
- 11:19 AM Changeset [6698] by
- Changes for future release Reggie 4.39
- 11:16 AM Milestone Reggie v4.38 completed
- See Reggie extension page for more information.
- 11:15 AM PluginDownload edited by
- Released Reggie 4.38 (diff)
- 11:15 AM net.sf.basedb.reggie edited by
- Released Reggie 4.38 (diff)
- 11:11 AM Changeset [6697] by
- Tagging Reggie 4.38
- 11:10 AM Changeset [6696] by
- Preparing to release Reggie 4.38.
- 8:18 AM Changeset [6695] by
- References #1374: Implement support for running jobs in a Singularity …
Apr 22, 2022:
- 10:58 AM Ticket #1374 (Implement support for running jobs in a Singularity container) closed by
- fixed
- 9:32 AM Changeset [6694] by
- References #1374: Implement support for running jobs in a Singularity …
- 8:52 AM Changeset [6693] by
- References #1374: Implement support for running jobs in a Singularity …
Apr 21, 2022:
- 1:27 PM Changeset [6692] by
- References #1374: Implement support for running jobs in a Singularity …
- 10:02 AM Changeset [6691] by
- Changes for future release Job scheduler extension 1.6
- 10:01 AM Milestone Job scheduler extension v1.5 completed
- See the Job scheduler extension page for …
- 10:00 AM PluginDownload edited by
- Released Job scheduler extension 1.5 (diff)
- 9:59 AM net.sf.basedb.opengrid edited by
- Released Job scheduler extension 1.5 (diff)
- 9:54 AM Changeset [6690] by
- Tagging Job scheduler extension 1.5
- 9:53 AM Changeset [6689] by
- Preparing to release Job scheduler extension 1.5
- 9:37 AM Changeset [6688] by
- References #1369: Implement support for starting jobs without a queue …
- 9:33 AM Ticket #1375 (Changes that are needed or useful for running jobs inside a container) closed by
- fixed
- 9:22 AM net.sf.basedb.opengrid/install edited by
- Update documentation for Job scheduler 1.5 (diff)
- 9:13 AM Ticket #1369 (Implement support for starting jobs without a queue system) closed by
- fixed
- 9:09 AM Changeset [6687] by
- References #1384: Add a (increasing) delay when submitting multiple …
- 9:07 AM Changeset [6686] by
- References #1374: Implement support for running jobs in a Singularity …
Apr 20, 2022:
- 2:46 PM Changeset [6685] by
- References #1374: Implement support for running jobs in a Singularity …
- 2:11 PM Ticket #1387 (Reload reggie-config.xml) closed by
- fixed: In 6684: […]
- 2:11 PM Changeset [6684] by
- Fixes #1387: Reload reggie-config.xml
- 1:19 PM Changeset [6683] by
- References #1387: Reload reggie-config.xml Added a method …
- 1:14 PM Ticket #1387 (Reload reggie-config.xml) created by
- This can currently be done via the web interface on the Open Grid …
- 11:15 AM Changeset [6682] by
- References #1374: Implement support for running jobs in a Singularity …
- 10:47 AM Changeset [6681] by
- References #1374: Implement support for running jobs in a Singularity …
- 9:09 AM Changeset [6680] by
- References #1374: Implement support for running jobs in a Singularity …
Apr 19, 2022:
- 1:18 PM Changeset [6679] by
- References #1374: Implement support for running jobs in a Singularity …
- 8:09 AM Ticket #1386 (Remove the genseq_check_illumina_dir.pl program from the "Check data ...) closed by
- fixed: In 6678: […]
- 8:09 AM Changeset [6678] by
- Fixes #1386: Remove the genseq_check_illumina_dir.pl program from the …
Apr 14, 2022:
- 1:51 PM Ticket #1386 (Remove the genseq_check_illumina_dir.pl program from the "Check data ...) created by
- We do not need this anymore and it will be a lot more complicated to …
- 1:18 PM Changeset [6677] by
- References #1374: Implement support for running jobs in a Singularity …
Apr 13, 2022:
- 9:04 AM Changeset [6676] by
- References #1374: Implement support for running jobs in a Singularity …
- 9:02 AM Changeset [6675] by
- References #1374: Implement support for running jobs in a Singularity …
Apr 11, 2022:
- 11:35 AM Ticket #1385 (Add a (increasing) delay when submitting multiple jobs in a batch) closed by
- fixed: In 6674: […]
- 11:35 AM Changeset [6674] by
- Fixes #1385: Add a (increasing) delay when submitting multiple jobs in …
- 11:31 AM Ticket #1385 (Add a (increasing) delay when submitting multiple jobs in a batch) created by
- This is related to #1384. For most situations the implementation in …
- 9:31 AM Changeset [6673] by
- References #1374: Implement support for running jobs in a Singularity …
- 9:28 AM Ticket #1384 (Add a (increasing) delay when submitting multiple jobs in a batch) closed by
- fixed: In 6672: […]
- 9:28 AM Changeset [6672] by
- Fixes #1384: Add a (increasing) delay when submitting multiple jobs in …
Apr 8, 2022:
- 1:13 PM Ticket #1384 (Add a (increasing) delay when submitting multiple jobs in a batch) created by
- When submitting multiple jobs at the same time and the cluster has a …
- 7:21 AM Ticket #1383 (Display number of FASTQ pairs waiting in the "Import gateway" on the ...) closed by
- fixed: Fixed in [6671]
Apr 7, 2022:
- 9:04 AM Changeset [6671] by
- 8:57 AM Ticket #1383 (Display number of FASTQ pairs waiting in the "Import gateway" on the ...) created by
- On the index page there is already a counter for the number of JSON …
- 8:23 AM Ticket #1382 (Batch toggle/set/clear checkboxes in secondary analysis confirmation ...) closed by
- fixed: In 6670: […]
- 8:23 AM Changeset [6670] by
- Fixes #1382: Batch toggle/set/clear checkboxes in secondary analysis …
- 7:28 AM Ticket #1382 (Batch toggle/set/clear checkboxes in secondary analysis confirmation ...) created by
- The confirmation wizards in the secondary analysis typically have …
Apr 6, 2022:
- 10:00 AM Changeset [6669] by
- References #1374: Implement support for running jobs in a Singularity …
- 9:52 AM Changeset [6668] by
- References #1375: Changes that are needed or useful for running jobs …
Apr 5, 2022:
- 9:41 AM Changeset [6667] by
- References #1375: Changes that are needed or useful for running jobs …
- 9:36 AM Changeset [6666] by
- References #1375: Changes that are needed or useful for running jobs …
- 9:33 AM Changeset [6665] by
- References #1374: Implement support for running jobs in a Singularity …
- 9:00 AM Ticket #1381 (Manually confirming a variant call analysis doesn't add the raw ...) closed by
- fixed: In 6664: […]
- 9:00 AM Changeset [6664] by
- Fixes #1381: Manually confirming a variant call analysis doesn't add …
- 8:57 AM Ticket #1381 (Manually confirming a variant call analysis doesn't add the raw ...) created by
- The next step after variant calling is to do targeted genotyping. This …
Apr 1, 2022:
- 3:34 PM Changeset [6663] by
- References #1374: Implement support for running jobs in a Singularity …
- 11:50 AM Changeset [6662] by
- References #1374: Implement support for running jobs in a Singularity …
- 10:58 AM Changeset [6661] by
- References #1374: Implement support for running jobs in a Singularity …
- 10:47 AM Changeset [6660] by
- References #1375: Changes that are needed or useful for running jobs …
- 10:29 AM Changeset [6659] by
- References #1375: Changes that are needed or useful for running jobs …
Mar 31, 2022:
- 7:26 AM Changeset [6658] by
- References #1374: Implement support for running jobs in a Singularity …
Mar 30, 2022:
- 8:27 AM Changeset [6657] by
- References #1374: Implement support for running jobs in a Singularity …
Mar 29, 2022:
- 8:50 AM Changeset [6656] by
- References #1374: Implement support for running jobs in a Singularity …
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