Timeline
Mar 9, 2022:
- 10:39 AM Changeset [6638] by
- References #1374: Implement support for running jobs in a Singularity …
- 8:49 AM Ticket #1376 (Selecting cluster in the secondary analysis wizards) closed by
- fixed: In 6637: […]
- 8:49 AM Changeset [6637] by
- Fixes #1376: Selecting cluster in the secondary analysis wizards All …
- 8:33 AM Ticket #1377 (The FASTQ import auto-confirmation doesn't start legacy jobs with ...) closed by
- fixed: In 6636: […]
- 8:33 AM Changeset [6636] by
- Fixes #1377: The FASTQ import auto-confirmation doesn't start legacy …
- 8:31 AM Ticket #1377 (The FASTQ import auto-confirmation doesn't start legacy jobs with ...) created by
- See #1340. This seems to be implemented only in the regular demux …
- 8:28 AM Changeset [6635] by
- References #1376: Selecting cluster in the secondary analysis wizards …
Mar 8, 2022:
- 2:49 PM Changeset [6634] by
- References #1375: Changes that are needed or useful for running jobs …
- 1:12 PM Changeset [6633] by
- References #1376: Selecting cluster in the secondary analysis wizards …
- 12:42 PM Changeset [6632] by
- References #1376: Selecting cluster in the secondary analysis wizards …
- 11:31 AM Ticket #1376 (Selecting cluster in the secondary analysis wizards) created by
- A new cluster is coming soon, and it will be based on Slurm and run …
- 9:36 AM Changeset [6631] by
- References #1374: Implement support for running jobs in a Singularity …
Mar 7, 2022:
- 12:56 PM Changeset [6630] by
- References #1374: Implement support for running jobs in a Singularity …
- 12:55 PM Changeset [6629] by
- References #1375: Changes that are needed or useful for running jobs …
- 8:47 AM Changeset [6628] by
- References #1374: Implement support for running jobs in a Singularity …
- 7:39 AM Changeset [6627] by
- References #1375: Changes that are needed or useful for running jobs …
Mar 4, 2022:
- 1:34 PM Changeset [6626] by
- References #1374: Implement support for running jobs in a Singularity …
- 1:13 PM Changeset [6625] by
- References #1375: Changes that are needed or useful for running jobs …
- 12:55 PM Changeset [6624] by
- References #1375: Changes that are needed or useful for running jobs …
- 12:50 PM Changeset [6623] by
- References #1375: Changes that are needed or useful for running jobs …
- 12:04 PM Ticket #1375 (Changes that are needed or useful for running jobs inside a container) created by
- I expect that we want to add some functionality and change some things …
- 11:57 AM Changeset [6622] by
- References #1374: Implement support for running jobs in a Singularity …
- 8:45 AM Ticket #1374 (Implement support for running jobs in a Singularity container) created by
- In a Singularity container we can install all programs that are needed …
Mar 3, 2022:
- 7:35 AM Milestone Reggie v4.37.2 completed
- Bug fixes and enhancements for Reggie 4.37.1. Revision Log: …
- 7:35 AM net.sf.basedb.reggie edited by
- Released Reggie 4.37.2 (diff)
- 7:32 AM Changeset [6621] by
- Tagging Reggie 4.37.2
- 7:32 AM Changeset [6620] by
- Preparing to release Reggie 4.37.2
- 7:30 AM Ticket #1372 (New pattern for RCC-id used for follow-up blood samples) closed by
- fixed
Mar 2, 2022:
- 2:59 PM Changeset [6619] by
- References #1372: New pattern for RCC-id used for follow-up blood …
- 2:18 PM Ticket #1373 (Display how a match was found in case summary) closed by
- fixed: In 6618: […]
- 2:18 PM Changeset [6618] by
- Fixes #1373: Display how a match was found in case summary
- 2:03 PM Ticket #1373 (Display how a match was found in case summary) created by
- The typical way to find a case to display in the case summary is to …
- 1:34 PM Changeset [6617] by
- References #1372: New pattern for RCC-id used for follow-up blood …
- 1:26 PM Changeset [6616] by
- References #1372: New pattern for RCC-id used for follow-up blood …
- 8:35 AM Ticket #1372 (New pattern for RCC-id used for follow-up blood samples) created by
- The pattern for RCC-id values are changed to be something like …
Mar 1, 2022:
- 8:33 AM Changeset [6615] by
- References #1369: Implement support for starting jobs without a queue …
Feb 28, 2022:
- 1:25 PM Changeset [6614] by
- References #1369: Implement support for starting jobs without a queue …
- 9:18 AM Changeset [6613] by
- References #1369: Implement support for starting jobs without a queue …
- 8:57 AM Ticket #1371 (Update to SSHj 0.32) closed by
- fixed: In 6612: […]
- 8:57 AM Changeset [6612] by
- Fixes #1371: Update to SSHj 0.32
- 8:48 AM Ticket #1371 (Update to SSHj 0.32) created by
- 8:45 AM Ticket #1370 (Switch to BASE 3.19) closed by
- fixed: In 6611: […]
- 8:45 AM Changeset [6611] by
- Fixes #1370: Switch to BASE 3.19
- 8:43 AM Ticket #1370 (Switch to BASE 3.19) created by
- 8:39 AM Ticket #1369 (Implement support for starting jobs without a queue system) created by
- This would be a feature to make it easier for developers to implement …
Feb 25, 2022:
- 7:45 AM Changeset [6610] by
- Merged Reggie 4.37.1 to the trunk
- 7:38 AM Milestone Reggie v4.37.1 completed
- Bug fixes and enhancements for Reggie 4.37. Revision Log: …
- 7:36 AM net.sf.basedb.reggie edited by
- Released Reggie 4.37.1 (diff)
- 7:34 AM Changeset [6609] by
- Tagging Reggie 4.37.1
- 7:34 AM Changeset [6608] by
- Preparing to release Reggie 4.37.1
Feb 24, 2022:
- 7:59 AM Ticket #1368 (The "Plasma/Serum" checkbox in the blood registration wizard should ...) closed by
- fixed: In 6607: […]
- 7:59 AM Changeset [6607] by
- Fixes #1368: The "Plasma/Serum?" checkbox in the blood registration …
- 7:39 AM Changeset [6606] by
- Creating bugfix branch for Reggie 4.37
- 7:20 AM Ticket #1368 (The "Plasma/Serum" checkbox in the blood registration wizard should ...) created by
Feb 23, 2022:
- 8:35 AM Ticket #1366 (If there are no variants in an index, it should not be possible to ...) closed by
- fixed: In 6605: […]
- 8:35 AM Changeset [6605] by
- Fixes #1366: If there are no variants in an index, it should not be …
- 7:41 AM Changeset [6604] by
- References #1364: Update to BASE 3.19 Added named transacations.
Feb 22, 2022:
- 2:16 PM Changeset [6603] by
- References #1364: Update to BASE 3.19 Changed in the build.xml file.
- 12:55 PM Changeset [6602] by
- Changes for future release Reggie 4.38
- 12:53 PM Milestone Reggie v4.37 completed
- See Reggie extension page for more information.
- 12:53 PM PluginDownload edited by
- Released Reggie 4.37 (diff)
- 12:52 PM net.sf.basedb.reggie edited by
- Released Reggie 4.37 (diff)
- 12:50 PM Ticket #1361 (Use DNA genotyping in the Genotype QC wizards) closed by
- fixed
- 12:49 PM Changeset [6601] by
- Tagging Reggie 4.37
- 12:48 PM Changeset [6600] by
- Preparing to release Reggie 4.37
- 12:46 PM Ticket #1367 (Named transactions initiated by Reggie services) closed by
- fixed: In 6599: […]
- 12:46 PM Changeset [6599] by
- Fixes #1367: Named transactions initiated by Reggie services
- 12:03 PM Ticket #1367 (Named transactions initiated by Reggie services) created by
- Typically when a transaction is initiated by Reggie the name is …
- 9:38 AM Ticket #1366 (If there are no variants in an index, it should not be possible to ...) created by
- 9:37 AM Ticket #1365 (Update to Lucene 9) created by
- 9:37 AM Ticket #1364 (Update to BASE 3.19) created by
- 9:25 AM Changeset [6598] by
- References #1361: Use DNA genotyping in the Genotype QC wizards The …
- 8:48 AM Ticket #1363 (Allow gzip compressed VCF files to be used in the genotype wizards) closed by
- fixed: In 6597: […]
- 8:48 AM Changeset [6597] by
- Fixes #1363: Allow gzip compressed VCF files to be used in the …
- 8:43 AM Ticket #1363 (Allow gzip compressed VCF files to be used in the genotype wizards) created by
- It should be simple to implement by just wrapping the InputStream …
- 8:39 AM Changeset [6596] by
- References #1361: Use DNA genotyping in the Genotype QC wizards Found …
- 8:39 AM Changeset [6595] by
- References #1361: Use DNA genotyping in the Genotype QC wizards …
Feb 21, 2022:
- 2:33 PM Changeset [6594] by
- References #1361: Use DNA genotyping in the Genotype QC wizards …
- 1:16 PM Ticket #1362 (Add a counter to the table in the Import externally processed samples ...) closed by
- fixed: In 6593: […]
- 1:16 PM Changeset [6593] by
- Fixes #1362: Add a counter to the table in the Import externally …
- 1:02 PM Ticket #1362 (Add a counter to the table in the Import externally processed samples ...) created by
- 1:01 PM Changeset [6592] by
- References #1361: Use DNA genotyping in the Genotype QC wizards …
- 1:01 PM Changeset [6591] by
- References #1361: Use DNA genotyping in the Genotype QC wizards …
- 9:29 AM Changeset [6590] by
- References #1361: Use DNA genotyping in the Genotype QC wizards …
- 8:52 AM Changeset [6589] by
- References #1361: Use DNA genotyping in the Genotype QC wizards The …
Feb 18, 2022:
- 10:39 AM Changeset [6588] by
- References #1361: Use DNA genotyping in the Genotype QC wizards The …
Feb 17, 2022:
- 12:53 PM Ticket #1361 (Use DNA genotyping in the Genotype QC wizards) created by
- Now that the genotyping information from the blood DNA samples have …
Feb 14, 2022:
- 7:56 AM Changeset [6587] by
- Changes for future release Reggie 4.37
- 7:53 AM Milestone Reggie v4.36 completed
- See Reggie extension page for more information.
- 7:53 AM Ticket #1360 (Updates to registration of specimen handled by external lab) closed by
- fixed
- 7:53 AM PluginDownload edited by
- Released Reggie 4.36 (diff)
- 7:52 AM net.sf.basedb.reggie edited by
- Released Reggie 4.36 (diff)
- 7:47 AM Changeset [6586] by
- Tagging Reggie 4.36
- 7:47 AM Changeset [6585] by
- Preparing to release Reggie 4.36
Feb 11, 2022:
- 1:10 PM Changeset [6584] by
- References #1360: Updates to registration of specimen handled by …
- 1:09 PM Changeset [6583] by
- References #1360: Updates to registration of specimen handled by …
- 8:57 AM Changeset [6582] by
- References #1360: Updates to registration of specimen handled by …
Feb 10, 2022:
- 1:41 PM Changeset [6581] by
- References #1360: Updates to registration of specimen handled by …
- 9:26 AM Changeset [6580] by
- References #1360: Updates to registration of specimen handled by …
- 8:50 AM Changeset [6579] by
- References #1360: Updates to registration of specimen handled by …
Feb 9, 2022:
- 2:06 PM Changeset [6578] by
- References #1360: Updates to registration of specimen handled by …
- 9:15 AM Changeset [6577] by
- References #1360: Updates to registration of specimen handled by …
- 9:02 AM Changeset [6576] by
- References #1360: Updates to registration of specimen handled by …
- 8:45 AM Changeset [6575] by
- References #1360: Updates to registration of specimen handled by …
Feb 8, 2022:
- 1:13 PM Changeset [6574] by
- References #1360: Updates to registration of specimen handled by …
Feb 7, 2022:
- 9:32 AM Changeset [6573] by
- References #1360: Updates to registration of specimen handled by …
- 9:11 AM Changeset [6572] by
- References #1360: Updates to registration of specimen handled by …
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