Timeline



Nov 19, 2020:

1:26 PM Changeset [6069] by Nicklas Nordborg
References #1277: Update to iText PDF 7 Started to re-design the …
9:12 AM Changeset [6068] by Nicklas Nordborg
References #1190: SCAN-B report Fixed some issues that causes report …
8:06 AM Changeset [6067] by Nicklas Nordborg
References #1190: SCAN-B report Changed HER2 status to use one of the …
7:46 AM Changeset [6066] by Nicklas Nordborg
References #1190: SCAN-B report Changed the "yellow-label" icon to svg.

Nov 18, 2020:

2:26 PM Changeset [6065] by Nicklas Nordborg
References #1190: SCAN-B report Changed the "warning" and "ok" icons …
2:25 PM Changeset [6064] by Nicklas Nordborg
References #1277: Update to iText PDF 7 Implemented support for …
12:31 PM Changeset [6063] by Nicklas Nordborg
Fixed a NullPointerException
12:16 PM Changeset [6062] by Nicklas Nordborg
References #1277: Update to iText PDF 7 Removed the old PdfUtil
12:11 PM Changeset [6061] by Nicklas Nordborg
References #1277: Update to iText PDF 7 Updated the "Referral …

Nov 17, 2020:

2:49 PM Changeset [6060] by Nicklas Nordborg
References #1277: Update to iText PDF 7 Updated the "Gene report" and …
1:57 PM Changeset [6059] by Nicklas Nordborg
References #1190: SCAN-B report The changes in [6026] broke the …
11:21 AM Changeset [6058] by Nicklas Nordborg
References #1277: Update to iText PDF 7 Added new utility class …
8:36 AM Ticket #1277 (Update to iText PDF 7) created by Nicklas Nordborg
We are currently using iText PDF 5.5.3. The latest version is 7.1.13. …

Nov 16, 2020:

7:45 AM Changeset [6057] by Nicklas Nordborg
References #1190: SCAN-B report Added colored circles to ROR section.

Nov 13, 2020:

1:17 PM Changeset [6056] by Nicklas Nordborg
References #1190: SCAN-B report Updated the report generation to use …
11:26 AM Changeset [6055] by Nicklas Nordborg
References #1271: HE glass images in the Histology wizard Implemented …
11:12 AM Changeset [6054] by Nicklas Nordborg
References #1273: Switch to java 11 and BASE 3.17 The .classpath is …
11:08 AM Changeset [6053] by Nicklas Nordborg
References #1276: Add more thumbnail sizes Added possibility to crop …

Nov 12, 2020:

1:04 PM Changeset [6052] by Nicklas Nordborg
References #1271: HE glass images in the Histology wizard Added the …
1:03 PM Changeset [6051] by Nicklas Nordborg
References #1271: HE glass images in the Histology wizard Display a …
9:01 AM Changeset [6050] by Nicklas Nordborg
References #1271: HE glass images in the Histology wizard Added …
8:27 AM Changeset [6049] by Nicklas Nordborg
References #1271: HE glass images in the Histology wizard Added …
8:15 AM Ticket #1276 (Add more thumbnail sizes) closed by Nicklas Nordborg
fixed: In 6048: […]
8:15 AM Changeset [6048] by Nicklas Nordborg
Fixes #1276: Add more thumbnail sizes XXLARGE is now avilable. The …
8:14 AM Ticket #1276 (Add more thumbnail sizes) created by Nicklas Nordborg
An XXLARGE size could be useful.
7:55 AM Changeset [6047] by Nicklas Nordborg
References #1274 and #1275. Added support for setting rotation and …

Nov 11, 2020:

2:40 PM Changeset [6046] by Nicklas Nordborg
References #1274: Add support for NDPI images NDPI image loader now …
12:44 PM Changeset [6045] by Nicklas Nordborg
References #1274: Add support for NDPI images First version of NDPI …
10:52 AM Changeset [6044] by Nicklas Nordborg
References #1275: Implement support for rotating thumbnail images …
9:36 AM Changeset [6043] by Nicklas Nordborg
References #1275: Implement support for rotating thumbnail images …
8:56 AM Ticket #1273 (Switch to java 11 and BASE 3.17) closed by Nicklas Nordborg
fixed: In 6042: […]
8:56 AM Changeset [6042] by Nicklas Nordborg
Fixes #1273: Switch to java 11 and BASE 3.17
8:49 AM Ticket #1275 (Implement support for rotating thumbnail images) created by Nicklas Nordborg
This could be specified in the request URL as a parameter in the same …
8:48 AM Ticket #1274 (Add support for NDPI images) created by Nicklas Nordborg
NDPI = NanoZoomer Digiyal Pathology Image Basically this is a TIFF …
8:44 AM Ticket #1273 (Switch to java 11 and BASE 3.17) created by Nicklas Nordborg
See for example #1154.
8:42 AM Changeset [6041] by Nicklas Nordborg
References #1190: SCAN-B report Added extension for adding a "SCAN-B …

Nov 10, 2020:

2:13 PM Changeset [6040] by Nicklas Nordborg
References #1272: Multipe auto-confirmation steps for a single item …
8:21 AM Changeset [6039] by Nicklas Nordborg
References #1190: SCAN-B report Adding helper methods to the …

Nov 3, 2020:

1:55 PM Changeset [6038] by Jari Häkkinen
Removing obsolete test data

Nov 2, 2020:

9:24 AM Changeset [6037] by Nicklas Nordborg
References #1190: SCAN-B report Made a copy of the GeneReport to …
8:38 AM Changeset [6036] by Nicklas Nordborg
References #1190: SCAN-B report Added ScriptDefinition and moved …

Oct 29, 2020:

10:51 AM Changeset [6035] by Nicklas Nordborg
References #1190: SCAN-B report Renaming the net.sf.basedb.reggie.r
9:57 AM Changeset [6034] by Nicklas Nordborg
References #1190: SCAN-B report The report combiner plug-in now …
9:24 AM Changeset [6033] by Nicklas Nordborg
References #1190: SCAN-B report Updated the report combiner plug-in …
8:23 AM Changeset [6032] by Nicklas Nordborg
References #1190: SCAN-B report The debug mode (added in [6020]) …
8:21 AM Changeset [6031] by Nicklas Nordborg
References #1190: SCAN-B report The SCAN-B report should use external …

Oct 28, 2020:

2:46 PM Changeset [6030] by Nicklas Nordborg
References #1190: SCAN-B report Added a <scanb-report> section to …
12:50 PM Changeset [6029] by Nicklas Nordborg
References #1190: SCAN-B report Implemented support for translating …
9:53 AM Changeset [6028] by Nicklas Nordborg
References #1190: SCAN-B report Implemented a "debug mode" option …
8:54 AM Changeset [6027] by Nicklas Nordborg
References #1190: SCAN-B report Re-worked the SCAN-B report …
7:38 AM Changeset [6026] by Nicklas Nordborg
References #1190: SCAN-B report Added support for extracting FPKM …

Oct 26, 2020:

2:19 PM Changeset [6025] by Nicklas Nordborg
References #1272: Multipe auto-confirmation steps for a single item …
12:57 PM Changeset [6024] by Nicklas Nordborg
References #1190: SCAN-B report Re-enabled the SCAN-B report wizard.
11:34 AM Changeset [6023] by Nicklas Nordborg
References #1272: Multipe auto-confirmation steps for a single item …
8:27 AM Changeset [6022] by Nicklas Nordborg
References #1272: Multipe auto-confirmation steps for a single item …

Oct 23, 2020:

2:42 PM Changeset [6021] by Nicklas Nordborg
References #1272: Multipe auto-confirmation steps for a single item …

Oct 22, 2020:

9:12 AM Ticket #1272 (Multipe auto-confirmation steps for a single item) created by Nicklas Nordborg
The secondary analysis pipelines are becoming more and more complex …
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