Timeline
Mar 25, 2020:
- 1:25 PM Changeset [5881] by
- References #1232: Add support for external sequencing Started to …
- 10:00 AM Ticket #1234 (Implement batch importer for followup blood samples) created by
- Handling of follow up blood has been moved to an external entity. …
- 9:30 AM Ticket #1200 (Release exporter changes due to Variant calling pipeline) closed by
- fixed
- 9:30 AM Changeset [5880] by
- References #1200: Release exporter changes due to Variant calling …
- 8:00 AM Ticket #1229 (Import some variants as annotations) closed by
- fixed
- 8:00 AM Changeset [5879] by
- References #1229: Import some variants as annotations Only commit for …
Mar 24, 2020:
- 2:37 PM Changeset [5878] by
- References #1229: Import some variants as annotations Use the …
- 1:46 PM Changeset [5877] by
- References #1229: Import some variants as annotations Added a wizard …
- 8:59 AM Changeset [5876] by
- References #1229: Import some variants as annotations Added a …
- 7:40 AM Changeset [5875] by
- References #1200: Release exporter changes due to Variant calling …
Mar 23, 2020:
- 2:23 PM Ticket #1233 (Add support for importing relase data with variant calling) closed by
- fixed
- 2:23 PM Changeset [5874] by
- References #1233: Add support for importing relase data with variant …
- 1:10 PM Ticket #1233 (Add support for importing relase data with variant calling) created by
- We need to add some more pre-defined data types in the installation …
- 11:49 AM Changeset [5873] by
- References #1200: Release exporter changes due to Variant calling …
- 9:12 AM Changeset [5872] by
- References #1229: Import some variants as annotations All variants …
Mar 20, 2020:
- 11:17 AM Changeset [5871] by
- References #1231: Add support for sequencing with NovaSeq? Fixes to …
- 8:39 AM Changeset [5870] by
- References #1231: Add support for sequencing with NovaSeq? Added …
Mar 19, 2020:
- 9:54 AM Changeset [5869] by
- References #1231: Add support for sequencing with NovaSeq? Fixed …
Mar 18, 2020:
- 12:47 PM Changeset [5868] by
- References #1231: Add support for sequencing with NovaSeq? Implemented …
- 11:44 AM Changeset [5867] by
- References #1231: Add support for sequencing with NovaSeq? Started to …
Mar 13, 2020:
- 9:04 AM Ticket #1232 (Add support for external sequencing) created by
- This is related to the support for NovaSeq sequencing (see #1231). …
- 8:48 AM Changeset [5866] by
- References #1231: Add support for sequencing with NovaSeq? The regular …
Mar 12, 2020:
- 1:51 PM Changeset [5865] by
- References #1231: Add support for sequencing with NovaSeq? Demuxing …
- 8:56 AM Changeset [5864] by
-
Refs #1029. Updates due to version number change to "
1.6.0-dev". … - 8:48 AM Changeset [5863] by
-
Refs #1029. Updates due to version number change to "
1.6.0b8". 1. …
Mar 11, 2020:
- 11:05 AM Changeset [5862] by
- References #1231: Add support for sequencing with NovaSeq? Fixes some …
- 8:07 AM Changeset [5861] by
- Merged fixes in Reggie 4.25.1 to the trunk.
- 8:04 AM Milestone Reggie v4.25.1 completed
- Bug fixes and enhancements for Reggie 4.25. Revision Log: …
- 8:03 AM net.sf.basedb.reggie edited by
- Released Reggie 4.25.1 (diff)
- 8:00 AM Changeset [5860] by
- Tagging Reggie 4.25.1
- 7:59 AM Changeset [5859] by
- Preparing to release Reggie 4.25.1
Mar 10, 2020:
- 8:16 AM Changeset [5858] by
- Refs #1029. DNA/RNA extraction wizards "Lab tracking protocol for FFPE …
- 8:12 AM Changeset [5857] by
- References #1231: Add support for sequencing with NovaSeq? The …
Mar 9, 2020:
- 2:17 PM Changeset [5856] by
- References #1231: Add support for sequencing with NovaSeq? Added …
- 2:11 PM Changeset [5855] by
- References #1231: Add support for sequencing with NovaSeq? Added …
- 11:27 AM Ticket #1231 (Add support for sequencing with NovaSeq) created by
- Sequencing with a NovaSeq is similar to the sequencing with NextSeq …
Mar 6, 2020:
- 3:38 PM Changeset [5854] by
- Refs #1029. FFPE section order form generation updated have bar code …
- 1:44 PM Ticket #1230 (NullPointerException in the "Map external data" wizard) closed by
- fixed: In 5853: […]
- 1:44 PM Changeset [5853] by
- Fixes #1230: NullPointerException? in the "Map external data" wizard …
- 1:14 PM Ticket #1230 (NullPointerException in the "Map external data" wizard) created by
- Stacktrace […] It seems to be triggered when re-mapping from a …
- 11:04 AM Changeset [5852] by
- Refs #1029. DNA/RNA extraction wizards "Lab tracking protocol for FFPE …
Mar 4, 2020:
- 2:19 PM Ticket #1229 (Import some variants as annotations) created by
- If we find one or more variants in a sample that belongs to a …
- 8:28 AM Changeset [5851] by
- References #1228: Add file actions for viewing genotype and variant …
- 8:26 AM Ticket #1228 (Add file actions for viewing genotype and variant information) closed by
- fixed: In 5850: […]
- 8:26 AM Changeset [5850] by
- Fixes #1228: Add file actions for viewing genotype and variant …
Mar 3, 2020:
- 1:31 PM Ticket #1227 (Switch to BASE 3.16) closed by
- fixed: In 5849: […]
- 1:31 PM Changeset [5849] by
- Fixes #1227: Switch to BASE 3.16
- 9:02 AM Ticket #1228 (Add file actions for viewing genotype and variant information) created by
- BASE 3.16 now has support for "file viewer actions" …
- 9:00 AM Ticket #1227 (Switch to BASE 3.16) created by
Mar 2, 2020:
- 8:45 AM Changeset [5848] by
- Refs #1029. New wizard for FFPE section (specimen) tumour cell …
Feb 27, 2020:
- 9:34 AM Ticket #1226 (More thread deadlocks) closed by
- fixed: In 5847: […]
- 9:34 AM Changeset [5847] by
- Fixes #1226: More thread deadlocks I hope this can fix the deadlock.
- 9:26 AM Ticket #1226 (More thread deadlocks) created by
- I got another thread deadlock similar to #1203. It is still in the …
Feb 26, 2020:
- 2:44 PM Changeset [5846] by
- References #1218: Implement MIPs alignment Fixed some comments.
- 2:27 PM Changeset [5845] by
- References #1218: Implement MIPs alignment Added manual confirmation …
- 8:37 AM Changeset [5844] by
- References #1218: Implement MIPs alignment Adding JSP and javascript …
Feb 25, 2020:
- 2:21 PM Changeset [5843] by
- References #1218: Implement MIPs alignment Importing some numbers …
- 11:47 AM Changeset [5842] by
- References #1218: Implement MIPs alignment Added functions for …
- 11:47 AM Changeset [5841] by
- References #1218: Implement MIPs alignment Finalizing the MIPs …
- 9:35 AM Changeset [5840] by
- References #1218: Implement MIPs alignment Added functions for …
- 9:34 AM Changeset [5839] by
- References #1218: Implement MIPs alignment Re-designed the …
Feb 24, 2020:
- 3:45 PM Changeset [5838] by
- References #1218: Implement MIPs alignment Added functions for the …
- 3:40 PM Changeset [5837] by
- References #1218: Implement MIPs alignment Re-designed the alignment …
- 1:38 PM Changeset [5836] by
- References #1218: Implement MIPs alignment Added functions for …
- 1:37 PM Changeset [5835] by
- References #1218: Implement MIPs alignment Re-designed the two steps …
- 11:11 AM Changeset [5834] by
- References #1218: Implement MIPs alignment Started to implement a …
- 11:05 AM Changeset [5833] by
- References #1218: Implement MIPs alignment Started to re-design the …
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