Timeline
Mar 19, 2020:
- 9:54 AM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5869: […]
- 9:54 AM Changeset [5869] by
- References #1231: Add support for sequencing with NovaSeq Fixed …
Mar 18, 2020:
- 12:47 PM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5868: […]
- 12:47 PM Changeset [5868] by
- References #1231: Add support for sequencing with NovaSeq Implemented …
- 11:44 AM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5867: […]
- 11:44 AM Changeset [5867] by
- References #1231: Add support for sequencing with NovaSeq Started to …
Mar 13, 2020:
- 9:05 AM Ticket #1232 (Add support for external sequencing) updated by
-
Status changed
- 9:04 AM Ticket #1232 (Add support for external sequencing) created by
- This is related to the support for NovaSeq sequencing (see #1231). …
- 8:50 AM Tickets #1229,1231 batch updated by
-
Status changed
- 8:48 AM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5866: […]
- 8:48 AM Changeset [5866] by
- References #1231: Add support for sequencing with NovaSeq The regular …
Mar 12, 2020:
- 1:51 PM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5865: […]
- 1:51 PM Changeset [5865] by
- References #1231: Add support for sequencing with NovaSeq Demuxing …
- 8:56 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5864: […]
- 8:56 AM Changeset [5864] by
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Refs #1029. Updates due to version number change to "
1.6.0-dev
". … - 8:48 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5863: […]
- 8:48 AM Changeset [5863] by
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Refs #1029. Updates due to version number change to "
1.6.0b8
". 1. …
Mar 11, 2020:
- 11:05 AM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5862: […]
- 11:05 AM Changeset [5862] by
- References #1231: Add support for sequencing with NovaSeq Fixes some …
- 8:07 AM Changeset [5861] by
- Merged fixes in Reggie 4.25.1 to the trunk.
- 8:04 AM Milestone Reggie v4.25.1 completed
- Bug fixes and enhancements for Reggie 4.25. Revision Log: …
- 8:03 AM net.sf.basedb.reggie edited by
- Released Reggie 4.25.1 (diff)
- 8:00 AM Changeset [5860] by
- Tagging Reggie 4.25.1
- 7:59 AM Changeset [5859] by
- Preparing to release Reggie 4.25.1
Mar 10, 2020:
- 8:16 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5858: […]
- 8:16 AM Changeset [5858] by
- Refs #1029. DNA/RNA extraction wizards "Lab tracking protocol for FFPE …
- 8:12 AM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5857: […]
- 8:12 AM Changeset [5857] by
- References #1231: Add support for sequencing with NovaSeq The …
Mar 9, 2020:
- 2:17 PM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5856: […]
- 2:17 PM Changeset [5856] by
- References #1231: Add support for sequencing with NovaSeq Added …
- 2:11 PM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
- In 5855: […]
- 2:11 PM Changeset [5855] by
- References #1231: Add support for sequencing with NovaSeq Added …
- 2:03 PM Ticket #1231 (Add support for sequencing with NovaSeq) updated by
-
Summary changed
- 11:27 AM Ticket #1231 (Add support for sequencing with NovaSeq) created by
- Sequencing with a NovaSeq is similar to the sequencing with NextSeq …
Mar 6, 2020:
- 3:38 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5854: […]
- 3:38 PM Changeset [5854] by
- Refs #1029. FFPE section order form generation updated have bar code …
- 2:57 PM Ticket #1229 (Import some variants as annotations) updated by
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Description changed
- 2:55 PM Ticket #1229 (Import some variants as annotations) updated by
-
Description changed
- 1:44 PM Ticket #1230 (NullPointerException in the "Map external data" wizard) closed by
- fixed: In 5853: […]
- 1:44 PM Changeset [5853] by
- Fixes #1230: NullPointerException in the "Map external data" wizard …
- 1:14 PM Ticket #1230 (NullPointerException in the "Map external data" wizard) created by
- Stacktrace […] It seems to be triggered when re-mapping from a …
- 11:04 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5852: […]
- 11:04 AM Changeset [5852] by
- Refs #1029. DNA/RNA extraction wizards "Lab tracking protocol for FFPE …
Mar 4, 2020:
- 2:21 PM Ticket #1229 (Import some variants as annotations) updated by
-
Description changed
- 2:19 PM Ticket #1229 (Import some variants as annotations) created by
- If we find one or more variants in a sample that belongs to a …
- 8:28 AM Ticket #1228 (Add file actions for viewing genotype and variant information) updated by
- In 5851: […]
- 8:28 AM Changeset [5851] by
- References #1228: Add file actions for viewing genotype and variant …
- 8:26 AM Ticket #1228 (Add file actions for viewing genotype and variant information) closed by
- fixed: In 5850: […]
- 8:26 AM Changeset [5850] by
- Fixes #1228: Add file actions for viewing genotype and variant …
Mar 3, 2020:
- 1:31 PM Ticket #1227 (Switch to BASE 3.16) closed by
- fixed: In 5849: […]
- 1:31 PM Changeset [5849] by
- Fixes #1227: Switch to BASE 3.16
- 9:02 AM Ticket #1228 (Add file actions for viewing genotype and variant information) created by
- BASE 3.16 now has support for "file viewer actions" …
- 9:00 AM Ticket #1227 (Switch to BASE 3.16) created by
Mar 2, 2020:
- 8:45 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5848: […]
- 8:45 AM Changeset [5848] by
- Refs #1029. New wizard for FFPE section (specimen) tumour cell …
Feb 27, 2020:
- 9:34 AM Ticket #1226 (More thread deadlocks) closed by
- fixed: In 5847: […]
- 9:34 AM Changeset [5847] by
- Fixes #1226: More thread deadlocks I hope this can fix the deadlock.
- 9:26 AM Ticket #1226 (More thread deadlocks) created by
- I got another thread deadlock similar to #1203. It is still in the …
Feb 26, 2020:
- 2:44 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5846: […]
- 2:44 PM Changeset [5846] by
- References #1218: Implement MIPs alignment Fixed some comments.
- 2:27 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5845: […]
- 2:27 PM Changeset [5845] by
- References #1218: Implement MIPs alignment Added manual confirmation …
- 8:37 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5844: […]
- 8:37 AM Changeset [5844] by
- References #1218: Implement MIPs alignment Adding JSP and javascript …
Feb 25, 2020:
- 2:21 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5843: […]
- 2:21 PM Changeset [5843] by
- References #1218: Implement MIPs alignment Importing some numbers …
- 11:47 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5842: […]
- 11:47 AM Changeset [5842] by
- References #1218: Implement MIPs alignment Added functions for …
- 11:47 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5841: […]
- 11:47 AM Changeset [5841] by
- References #1218: Implement MIPs alignment Finalizing the MIPs …
- 9:35 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5840: […]
- 9:35 AM Changeset [5840] by
- References #1218: Implement MIPs alignment Added functions for …
- 9:34 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5839: […]
- 9:34 AM Changeset [5839] by
- References #1218: Implement MIPs alignment Re-designed the …
Feb 24, 2020:
- 3:45 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5838: […]
- 3:45 PM Changeset [5838] by
- References #1218: Implement MIPs alignment Added functions for the …
- 3:40 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5837: […]
- 3:40 PM Changeset [5837] by
- References #1218: Implement MIPs alignment Re-designed the alignment …
- 1:38 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5836: […]
- 1:38 PM Changeset [5836] by
- References #1218: Implement MIPs alignment Added functions for …
- 1:37 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5835: […]
- 1:37 PM Changeset [5835] by
- References #1218: Implement MIPs alignment Re-designed the two steps …
- 11:11 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5834: […]
- 11:11 AM Changeset [5834] by
- References #1218: Implement MIPs alignment Started to implement a …
- 11:05 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5833: […]
- 11:05 AM Changeset [5833] by
- References #1218: Implement MIPs alignment Started to re-design the …
Feb 21, 2020:
- 4:19 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5832: […]
- 4:19 PM Changeset [5832] by
- Refs #1029. FFPE section (specimen) registration wizard updated by …
- 2:36 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5831: […]
- 2:36 PM Changeset [5831] by
- References #1218: Implement MIPs alignment Final steps in the …
- 11:35 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5830: […]
- 11:35 AM Changeset [5830] by
- References #1218: Implement MIPs alignment Added alignement with …
Feb 19, 2020:
- 3:21 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5829: […]
- 3:21 PM Changeset [5829] by
- References #1218: Implement MIPs alignment Added …
- 2:02 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5828: […]
- 2:02 PM Changeset [5828] by
- References #1218: Implement MIPs alignment Added FastqToSam step that …
- 9:25 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5827: […]
- 9:25 AM Changeset [5827] by
- References #1218: Implement MIPs alignment Added Trimmomatic steps to …
Feb 18, 2020:
- 2:15 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5826: […]
- 2:15 PM Changeset [5826] by
- References #1218: Implement MIPs alignment Started to implement this …
- 2:13 PM Ticket #1218 (Implement MIPs alignment) updated by
-
Status, Milestone changed
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