Timeline
Feb 25, 2020:
- 2:21 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5843: […]
- 2:21 PM Changeset [5843] by
- References #1218: Implement MIPs alignment Importing some numbers …
- 11:47 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5842: […]
- 11:47 AM Changeset [5842] by
- References #1218: Implement MIPs alignment Added functions for …
- 11:47 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5841: […]
- 11:47 AM Changeset [5841] by
- References #1218: Implement MIPs alignment Finalizing the MIPs …
- 9:35 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5840: […]
- 9:35 AM Changeset [5840] by
- References #1218: Implement MIPs alignment Added functions for …
- 9:34 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5839: […]
- 9:34 AM Changeset [5839] by
- References #1218: Implement MIPs alignment Re-designed the …
Feb 24, 2020:
- 3:45 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5838: […]
- 3:45 PM Changeset [5838] by
- References #1218: Implement MIPs alignment Added functions for the …
- 3:40 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5837: […]
- 3:40 PM Changeset [5837] by
- References #1218: Implement MIPs alignment Re-designed the alignment …
- 1:38 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5836: […]
- 1:38 PM Changeset [5836] by
- References #1218: Implement MIPs alignment Added functions for …
- 1:37 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5835: […]
- 1:37 PM Changeset [5835] by
- References #1218: Implement MIPs alignment Re-designed the two steps …
- 11:11 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5834: […]
- 11:11 AM Changeset [5834] by
- References #1218: Implement MIPs alignment Started to implement a …
- 11:05 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5833: […]
- 11:05 AM Changeset [5833] by
- References #1218: Implement MIPs alignment Started to re-design the …
Feb 21, 2020:
- 4:19 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5832: […]
- 4:19 PM Changeset [5832] by
- Refs #1029. FFPE section (specimen) registration wizard updated by …
- 2:36 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5831: […]
- 2:36 PM Changeset [5831] by
- References #1218: Implement MIPs alignment Final steps in the …
- 11:35 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5830: […]
- 11:35 AM Changeset [5830] by
- References #1218: Implement MIPs alignment Added alignement with …
Feb 19, 2020:
- 3:21 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5829: […]
- 3:21 PM Changeset [5829] by
- References #1218: Implement MIPs alignment Added …
- 2:02 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5828: […]
- 2:02 PM Changeset [5828] by
- References #1218: Implement MIPs alignment Added FastqToSam step that …
- 9:25 AM Ticket #1218 (Implement MIPs alignment) updated by
- In 5827: […]
- 9:25 AM Changeset [5827] by
- References #1218: Implement MIPs alignment Added Trimmomatic steps to …
Feb 18, 2020:
- 2:15 PM Ticket #1218 (Implement MIPs alignment) updated by
- In 5826: […]
- 2:15 PM Changeset [5826] by
- References #1218: Implement MIPs alignment Started to implement this …
- 2:13 PM Ticket #1218 (Implement MIPs alignment) updated by
-
Status, Milestone changed
Feb 6, 2020:
- 11:05 AM Changeset [5825] by
- Change needed to find R's BLAS/LAPACK implementation
Feb 4, 2020:
- 4:43 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5824: […]
- 4:43 PM Changeset [5824] by
- Refs #1029. FFPE section (specimen) registration wizard updated in …
- 1:31 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5823: […]
- 1:31 PM Changeset [5823] by
- Refs #1029. DNA/RNA Quantification wizard updated in an attempt to …
- 1:08 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Problem analysis: * Inspection of log files indicates that Null …
- 1:07 PM Changeset [5822] by
- Preparing for future release Reggie 4.26
- 1:05 PM Changeset [5821] by
- Creating bugfix branch for Reggie 4.25
- 1:04 PM Milestone Reggie v4.25 completed
- See Reggie extension page for more information.
- 1:03 PM PluginDownload edited by
- Released Reggie 4.25 (diff)
- 1:03 PM net.sf.basedb.reggie edited by
- Released Reggie 4.25 (diff)
- 12:58 PM Changeset [5820] by
- Tagging Reggie 4.25
- 12:57 PM Changeset [5819] by
- Preparing to release Reggie 4.25
Feb 3, 2020:
- 9:50 AM net.sf.basedb.reggie edited by
- Adding an entry for Reggie 4.25 in the download table (diff)
Jan 31, 2020:
- 2:30 PM Ticket #1212 (Enable filtering step for variant calling in auto-confirm mode) closed by
- fixed: In 5818: […]
- 2:30 PM Changeset [5818] by
- Fixes #1212: Enable filtering step for variant calling in auto-confirm mode
- 2:29 PM Ticket #1212 (Enable filtering step for variant calling in auto-confirm mode) updated by
-
Status, Milestone changed
- 8:29 AM net.sf.basedb.reggie/notes425 edited by
- Update the release notes for Reggie 4.25 (diff)
Jan 28, 2020:
- 12:57 PM Ticket #1209 (Add support for storing TMA specimen) closed by
- fixed
- 12:54 PM Ticket #1220 (Auto-analyze in the MIPs pipeline should start the demux) updated by
- In 5817: […]
- 12:54 PM Changeset [5817] by
- References #1220: Auto-analyze in the MIPs pipeline should start the …
- 12:50 PM Ticket #1208 (Implement wizard for building database of variant frequencies in ...) closed by
- fixed
- 12:49 PM Ticket #1215 (Include mutation signature analysis in the variant calling pipeline) closed by
- fixed
- 12:48 PM Ticket #1225 (Update databases used in variant calling pipeline) closed by
- fixed
- 12:48 PM Ticket #1225 (Update databases used in variant calling pipeline) updated by
-
Description changed
- 8:54 AM Ticket #1225 (Update databases used in variant calling pipeline) updated by
- In 5816: […]
- 8:54 AM Changeset [5816] by
- References #1225: Update databases used in variant calling pipeline …
- 8:41 AM Ticket #1225 (Update databases used in variant calling pipeline) updated by
-
Description changed
- 8:37 AM Ticket #1225 (Update databases used in variant calling pipeline) updated by
-
Description changed
- 8:29 AM Ticket #1225 (Update databases used in variant calling pipeline) updated by
-
Description changed
- 8:20 AM Ticket #1225 (Update databases used in variant calling pipeline) created by
- The aim is to update all databases that has been updated since the …
- 7:50 AM net.sf.basedb.reggie/notes425 created by
- Added note about updating to Reggie 4.25
Jan 27, 2020:
- 9:45 AM Ticket #1221 (Display more information in the Variant summary dialog) closed by
- fixed
- 9:38 AM Ticket #1216 (Finalize the "Confirm MIPs demux" wizard) closed by
- fixed
- 9:37 AM Ticket #1222 (Remove the G5 distance calculations from the variant calling script) closed by
- fixed
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