Timeline
Jan 31, 2020:
- 2:30 PM Ticket #1212 (Enable filtering step for variant calling in auto-confirm mode) closed by
- fixed: In 5818: […]
- 2:30 PM Changeset [5818] by
- Fixes #1212: Enable filtering step for variant calling in auto-confirm mode
- 8:29 AM net.sf.basedb.reggie/notes425 edited by
- Update the release notes for Reggie 4.25 (diff)
Jan 28, 2020:
- 12:57 PM Ticket #1209 (Add support for storing TMA specimen) closed by
- fixed
- 12:54 PM Changeset [5817] by
- References #1220: Auto-analyze in the MIPs pipeline should start the …
- 12:50 PM Ticket #1208 (Implement wizard for building database of variant frequencies in ...) closed by
- fixed
- 12:49 PM Ticket #1215 (Include mutation signature analysis in the variant calling pipeline) closed by
- fixed
- 12:48 PM Ticket #1225 (Update databases used in variant calling pipeline) closed by
- fixed
- 8:54 AM Changeset [5816] by
- References #1225: Update databases used in variant calling pipeline …
- 8:20 AM Ticket #1225 (Update databases used in variant calling pipeline) created by
- The aim is to update all databases that has been updated since the …
- 7:50 AM net.sf.basedb.reggie/notes425 created by
- Added note about updating to Reggie 4.25
Jan 27, 2020:
- 9:45 AM Ticket #1221 (Display more information in the Variant summary dialog) closed by
- fixed
- 9:38 AM Ticket #1216 (Finalize the "Confirm MIPs demux" wizard) closed by
- fixed
- 9:37 AM Ticket #1222 (Remove the G5 distance calculations from the variant calling script) closed by
- fixed
Jan 24, 2020:
- 2:37 PM Changeset [5815] by
- References #1208: Implement wizard for building database of variant …
Jan 23, 2020:
- 8:46 AM Ticket #1224 (The RNAseq library preperation wizard display protocols from other ...) closed by
- fixed: In 5814: […]
- 8:46 AM Changeset [5814] by
- Fixes #1224: The RNAseq library preperation wizard display protocols …
- 8:44 AM Ticket #1224 (The RNAseq library preperation wizard display protocols from other ...) created by
- And unfortunately, the MIPs protocol is selected as default.
Jan 22, 2020:
- 12:53 PM Ticket #1223 (Implement an option to skip labels for the Histology specimen in the ...) closed by
- fixed: In 5813: […]
- 12:53 PM Changeset [5813] by
- Fixes #1223: Implement an option to skip labels for the Histology …
- 12:52 PM Ticket #1223 (Implement an option to skip labels for the Histology specimen in the ...) created by
- The Histology part of the pipeline will be paused for some time sp the …
Jan 16, 2020:
- 8:35 AM Changeset [5812] by
- References #1221: Display more information in the Variant summary …
- 8:33 AM Changeset [5811] by
- References #1222: Remove the G5 distance calculations from the variant …
Jan 15, 2020:
- 2:48 PM Changeset [5810] by
- References #1222: Remove the G5 distance calculations from the variant …
- 2:42 PM Ticket #1222 (Remove the G5 distance calculations from the variant calling script) created by
- The calculations depend on the G5 flag that existed in dbSNP 151, but …
Jan 13, 2020:
- 1:15 PM Changeset [5809] by
- References #1215: Include mutation signature analysis in the variant …
Jan 10, 2020:
- 10:56 AM Changeset [5808] by
- References #1216: Finalize the "Confirm MIPs demux" wizard The read …
- 8:18 AM Changeset [5807] by
- References #1215: Include mutation signature analysis in the variant …
Jan 9, 2020:
- 11:54 AM Changeset [5806] by
- References #1209: Add support for storing TMA specimen Display the …
- 9:49 AM Changeset [5805] by
- References #1221: Display more information in the Variant summary …
- 9:17 AM Ticket #1221 (Display more information in the Variant summary dialog) created by
- A dialog that displays some information about filtered variants was …
Jan 8, 2020:
- 11:28 AM Changeset [5804] by
- References #1216: Finalize the "Confirm MIPs demux" wizard The MIPs …
- 11:26 AM Ticket #1220 (Auto-analyze in the MIPs pipeline should start the demux) closed by
- fixed: In 5803: […]
- 11:26 AM Changeset [5803] by
- Fixes #1220: Auto-analyze in the MIPs pipeline should start the demux
Jan 7, 2020:
- 1:20 PM Ticket #1220 (Auto-analyze in the MIPs pipeline should start the demux) created by
- This has been temporarily disabled due to testing. It seems to be …
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