Timeline
Nov 21, 2018:
- 4:12 PM Changeset [5134] by
- References #1074: Add more subtypes Added NoSpecimen subtype.
- 3:51 PM Changeset [5133] by
- References #1075: Change the release exporter to work with list of …
- 3:51 PM Changeset [5132] by
- References #1075: Change the release exporter to work with list of …
- 2:05 PM Changeset [5131] by
- References #1075: Change the release exporter to work with list of …
- 1:35 PM Changeset [5130] by
- References #1075: Change the release exporter to work with list of …
- 12:07 PM Changeset [5129] by
-
Refs #1029. Updates due to version number change to "
1.6.0-dev". … - 12:04 PM Changeset [5128] by
-
Refs #1029. Updates due to version number change to "
1.6.0a10". 1. … - 11:37 AM Changeset [5127] by
- Refs #1029. FFPE section order form wizard updated with new button …
- 10:14 AM Changeset [5126] by
- Refs #1029. FFPE section (specimen) registration wizard updated to …
- 9:56 AM Ticket #1084 (DataFileFolder annotation should always set a default value) closed by
- fixed: (In [5125]) Fixes #1084: DataFileFolder? annotation should always set a …
- 9:56 AM Changeset [5125] by
- Fixes #1084: DataFileFolder? annotation should always set a default value
- 9:55 AM Ticket #1084 (DataFileFolder annotation should always set a default value) created by
-
Existing items that doesn't have a value for
DataFilesFoldershould … - 9:48 AM Changeset [5124] by
- References #1075: Change the release exporter to work with list of …
- 9:11 AM Changeset [5123] by
- References #1074: Add more subtypes The "NO" subtype should be "No".
- 9:10 AM Changeset [5122] by
- References #1071: Installation wizard doesn't show error message …
- 9:08 AM Changeset [5121] by
- Refs #1029. FFPE section (specimen) registration wizard updated with …
- 8:15 AM Ticket #1083 (Add mBAF plot column to derived bioassay list) closed by
- fixed: (In [5120]) Fixes #1083: Add mBAF plot column to derived bioassay list …
- 8:15 AM Changeset [5120] by
- Fixes #1083: Add mBAF plot column to derived bioassay list The …
- 8:11 AM Ticket #1083 (Add mBAF plot column to derived bioassay list) created by
- The column should be used to display thumbnails of the mBAF plots in …
- 8:04 AM Changeset [5119] by
- Refs #1029. FFPE section (specimen) registration wizard updated by …
- 7:56 AM Ticket #1082 (HaplotypeCaller should not write command line parameters in result file) closed by
- fixed: (In [5118]) Fixes #1082: HaplotypeCaller? should not write command line …
- 7:56 AM Changeset [5118] by
- Fixes #1082: HaplotypeCaller? should not write command line parameters …
- 7:41 AM Ticket #1082 (HaplotypeCaller should not write command line parameters in result file) created by
- Just in case the command line contains some sensitive information. …
Nov 20, 2018:
- 4:09 PM Changeset [5117] by
- References #1081: The release exporter should export more data The …
- 3:03 PM Changeset [5116] by
- Refs #1029. FFPE block order form wizard updated to no longer write …
- 2:13 PM Changeset [5115] by
- Refs #1029. Case summary updated to support new naming scheme for DNA …
- 1:42 PM Changeset [5114] by
- Refs #1029. FFPE section (specimen) registration wizard updated: 1. …
- 1:06 PM Ticket #1080 (Add "Manual" option to the DoNotUse annotation type) closed by
- fixed: (In [5113]) Fixes #1080: Add "Manual" option to the DoNotUse? …
- 1:06 PM Changeset [5113] by
- Fixes #1080: Add "Manual" option to the DoNotUse? annotation type
- 1:03 PM Ticket #1079 (The FrozenTissue date importer should ignore lines without date) closed by
- fixed: (In [5112]) Fixes #1079: The FrozenTissue? date importer should ignore …
- 1:03 PM Changeset [5112] by
- Fixes #1079: The FrozenTissue? date importer should ignore lines …
- 12:55 PM Ticket #1081 (The release exporter should export more data) created by
- For existing items we should export more annotations/other data: * …
- 12:54 PM Changeset [5111] by
- Refs #1029. FFPE section registration wizard prepared for new sample …
- 12:52 PM Ticket #1080 (Add "Manual" option to the DoNotUse annotation type) created by
- 12:51 PM Ticket #1079 (The FrozenTissue date importer should ignore lines without date) created by
- This includes empty lines and lines with only white-space. Seems like …
- 10:24 AM Changeset [5110] by
- Refs #1029. Support for showing connected "chained" items in Case …
Nov 19, 2018:
- 2:35 PM Changeset [5109] by
- References #1074: Add more subtypes Added Retract, No, NotAsked, …
- 2:22 PM net.sf.basedb.reggie/notes421 edited by
- Added notes about ticket #1078 (diff)
- 2:06 PM Changeset [5108] by
- References #1078: "Not asked" subtype should be renamed to "NotAsked?" …
- 1:27 PM Ticket #1078 ("Not asked" subtype should be renamed to "NotAsked") created by
- The change must be made manually by an administrator before updating …
- 1:25 PM Changeset [5107] by
- References #1075: Change the release exporter to work with list of …
- 10:58 AM Changeset [5106] by
- References #1075: Change the release exporter to work with list of …
- 8:30 AM Changeset [5105] by
- References #1075: Change the release exporter to work with list of …
Nov 16, 2018:
- 2:19 PM Changeset [5104] by
- References #1075: Change the release exporter to work with list of …
- 12:32 PM Changeset [5103] by
- References #1075: Change the release exporter to work with list of …
- 9:20 AM Changeset [5102] by
- References #1075: Change the release exporter to work with list of …
- 8:26 AM Changeset [5101] by
- References #1075: Change the release exporter to work with list of …
Nov 15, 2018:
- 2:18 PM Changeset [5100] by
- References #1075: Change the release exporter to work with list of …
- 1:13 PM Changeset [5099] by
- References #1075: Change the release exporter to work with list of …
- 11:43 AM Changeset [5098] by
- References #1075: Change the release exporter to work with list of …
- 9:07 AM Changeset [5097] by
- References #1075: Change the release exporter to work with list of …
Nov 14, 2018:
- 2:52 PM Changeset [5096] by
- References #1075: Change the release exporter to work with list of …
- 2:35 PM Changeset [5095] by
- Refs #1029. Updates needed for FFPE blocks in selection menus to show …
- 2:19 PM Changeset [5094] by
- Refs #1029. MeLuDI updated with new configuration variables …
- 1:26 PM Changeset [5093] by
- Refs #1029. Basic support for Histology and H&E glass items added. The …
- 12:05 PM Changeset [5092] by
- Refs #1029. Support for showing connected "chained" items in Case …
- 10:46 AM Changeset [5091] by
- References #1075: Change the release exporter to work with list of …
- 9:22 AM Changeset [5090] by
- References #1075: Change the release exporter to work with list of …
- 8:15 AM Changeset [5089] by
- References #1075: Change the release exporter to work with list of …
Nov 13, 2018:
- 3:58 PM net.sf.basedb.reggie/notes421 created by
- Adding update notes for Reggie 4.21
- 3:39 PM Ticket #1077 (All biosource items should have an external id (release id)) closed by
- fixed: (In [5088]) Fixes #1077: All biosource items should have an external …
- 3:39 PM Changeset [5088] by
- Fixes #1077: All biosource items should have an external id (release …
- 2:20 PM Ticket #1077 (All biosource items should have an external id (release id)) created by
-
Currently, among the
Biosourceitem types it is onlyPatientitems … - 1:25 PM Ticket #1076 (The Level 3 export plug-in should generate rsync script with -L option) closed by
- fixed: (In [5087]) Fixes #1076: The Level 3 export plug-in should generate …
- 1:25 PM Changeset [5087] by
- Fixes #1076: The Level 3 export plug-in should generate rsync script …
- 1:12 PM Ticket #1076 (The Level 3 export plug-in should generate rsync script with -L option) created by
-
The current script only has
-loption (implicit via-a) which … - 10:22 AM Ticket #1075 (Change the release exporter to work with list of patients) created by
- The current release exporter plug-in works with a list of raw …
- 10:17 AM Ticket #1074 (Add more subtypes) created by
- The next release will start from the patient side and include other …
Nov 12, 2018:
- 11:21 AM Changeset [5086] by
- References #1072: Introduce Lysate item between RNA and Specimen …
- 8:58 AM Changeset [5085] by
- References #1072: Introduce Lysate item between RNA and Specimen …
- 8:31 AM Changeset [5084] by
- Refs #1029. FFPE section order form wizard updated to show material …
- 7:56 AM Changeset [5083] by
- Refs #1029. FFPE section order form wizard updated when creating label …
- 7:49 AM Changeset [5082] by
- Refs #1029. FFPE section order form generation updated for new PDF …
Nov 9, 2018:
- 11:11 AM Changeset [5081] by
- References #1072: Introduce Lysate item between RNA and Specimen …
- 8:52 AM Changeset [5080] by
- References #1072: Introduce Lysate item between RNA and Specimen …
Nov 8, 2018:
- 1:30 PM Changeset [5079] by
- References #1072: Introduce Lysate item between RNA and Specimen The …
- 12:59 PM Changeset [5078] by
- References #1072: Introduce Lysate item between RNA and Specimen The …
Nov 7, 2018:
- 1:12 PM Changeset [5077] by
- References #1072: Introduce Lysate item between RNA and Specimen …
- 10:39 AM Ticket #1073 (Switch to BASE 3.13) closed by
- fixed: (In [5076]) Fixes #1073: Switch to BASE 3.13
- 10:39 AM Changeset [5076] by
- Fixes #1073: Switch to BASE 3.13
- 9:55 AM Ticket #1073 (Switch to BASE 3.13) created by
- Since this is the current version.
- 9:43 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) created by
- The existing structure has a direct link between RNA and Specimen. We …
Nov 6, 2018:
- 4:42 PM Changeset [5075] by
-
Refs #1029. Annotation type
Annotationtype.LOCALIZATIONupdated to … - 8:59 AM Changeset [5074] by
- Refs #1029. FFPE block registration wizard updated for new input …
Nov 5, 2018:
- 4:29 PM Changeset [5073] by
- Refs #1029. FFPE block registration wizard updated by fixing typo: …
Nov 1, 2018:
- 2:34 PM Changeset [5072] by
-
Refs #1029. Updates due to version number change to "
1.6.0-dev". … - 2:10 PM Changeset [5071] by
-
Refs #1029. Updates due to version number change to "
1.6.0a9". 1. … - 8:46 AM Changeset [5070] by
- Refs #1029. FFPE block order form wizard updated by renaming button …
- 8:37 AM Changeset [5069] by
- Refs #1029. FFPE section order form wizard updated to create label …
Oct 31, 2018:
- 9:03 AM Changeset [5068] by
-
Refs #1029. Data access object file
SpecimenTube.javain … - 8:57 AM Changeset [5067] by
- Changes for future release Reggie 4.21
- 8:55 AM Milestone Reggie v4.20 completed
- See Reggie extension page for more information.
- 8:55 AM PluginDownload edited by
- Released Reggie 4.20 (diff)
- 8:53 AM net.sf.basedb.reggie edited by
- Released Reggie 4.20 (diff)
- 8:50 AM Ticket #1054 (Even more functionality in the Flagged alignment wizard) closed by
- fixed
- 8:47 AM Changeset [5066] by
- Tagging Reggie 4.20
- 8:47 AM Changeset [5065] by
- Preparing to release Reggie 4.20
- 8:44 AM Changeset [5064] by
- References #1068: Add mBAF analysis step to the Hisat/StringTie? …
- 8:39 AM Changeset [5063] by
- References #1054: Even more functionality in the Flagged alignment …
- 8:35 AM Ticket #1068 (Add mBAF analysis step to the Hisat/StringTie pipeline) closed by
- fixed
Oct 30, 2018:
- 2:58 PM Changeset [5062] by
- Refs #1029. First version of registration wizard for returned FFPE …
- 10:49 AM Changeset [5061] by
- Refs #1029. FFPE section block/section wizards updated for new/changed …
Oct 29, 2018:
- 4:57 PM Changeset [5060] by
- Refs #1029. First version of FFPE section (specimen) registration …
- 11:11 AM Ticket #1067 (Highlight related items in Case summary) closed by
- fixed
- 11:11 AM Changeset [5059] by
- References #1067: Highlight related items in Case summary Do not …
- 10:45 AM Ticket #1070 (The consent registration wizard doesn't check existing consent) closed by
- fixed: (In [5058]) Fixes #1070: The consent registration wizard doesn't check …
- 10:45 AM Changeset [5058] by
- Fixes #1070: The consent registration wizard doesn't check existing consent
- 8:26 AM Changeset [5057] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
Oct 26, 2018:
- 12:53 PM Changeset [5056] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
- 9:39 AM Changeset [5055] by
- 9:35 AM Changeset [5054] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
- 8:19 AM Changeset [5053] by
- Refs #1029. FFPE section order form updated for "Yellow label" FFPE …
Oct 25, 2018:
- 3:05 PM Changeset [5052] by
- Refs #1029. FFPE section order form wizard updated to keep track of …
Oct 24, 2018:
- 1:24 PM Changeset [5051] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
- 8:21 AM Changeset [5050] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
Oct 23, 2018:
- 3:04 PM Changeset [5049] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
Oct 22, 2018:
- 5:00 PM Changeset [5048] by
- Refs #1029. FFPE section order form wizard updated to show PAD number …
- 1:09 PM Changeset [5047] by
- Refs #1029. FFPE block registration wizard updated by fixing bug in …
- 11:21 AM Changeset [5046] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
- 9:16 AM Changeset [5045] by
- References #1058: Add mBAF analysis step to the Hisat/StringTie? …
Note: See TracTimeline
for information about the timeline view.
