Timeline



Oct 30, 2018:

2:58 PM Changeset [5062] by olle
Refs #1029. First version of registration wizard for returned FFPE …
10:49 AM Changeset [5061] by olle
Refs #1029. FFPE section block/section wizards updated for new/changed …

Oct 29, 2018:

4:57 PM Changeset [5060] by olle
Refs #1029. First version of FFPE section (specimen) registration …
11:11 AM Ticket #1067 (Highlight related items in Case summary) closed by Nicklas Nordborg
fixed
11:11 AM Changeset [5059] by Nicklas Nordborg
References #1067: Highlight related items in Case summary Do not …
10:45 AM Ticket #1070 (The consent registration wizard doesn't check existing consent) closed by Nicklas Nordborg
fixed: (In [5058]) Fixes #1070: The consent registration wizard doesn't check …
10:45 AM Changeset [5058] by Nicklas Nordborg
Fixes #1070: The consent registration wizard doesn't check existing consent
8:26 AM Changeset [5057] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?

Oct 26, 2018:

12:53 PM Changeset [5056] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
9:39 AM Changeset [5055] by Nicklas Nordborg
9:35 AM Changeset [5054] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
8:19 AM Changeset [5053] by olle
Refs #1029. FFPE section order form updated for "Yellow label" FFPE …

Oct 25, 2018:

3:05 PM Changeset [5052] by olle
Refs #1029. FFPE section order form wizard updated to keep track of …

Oct 24, 2018:

1:24 PM Changeset [5051] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
8:21 AM Changeset [5050] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?

Oct 23, 2018:

3:04 PM Changeset [5049] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?

Oct 22, 2018:

5:00 PM Changeset [5048] by olle
Refs #1029. FFPE section order form wizard updated to show PAD number …
1:09 PM Changeset [5047] by olle
Refs #1029. FFPE block registration wizard updated by fixing bug in …
11:21 AM Changeset [5046] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
9:16 AM Changeset [5045] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?

Oct 19, 2018:

4:13 PM Changeset [5044] by olle
Refs #1029. First version of FFPE block registration wizard added: …
1:37 PM Ticket #1071 (Installation wizard doesn't show error message) closed by Nicklas Nordborg
fixed
1:35 PM Changeset [5043] by Nicklas Nordborg
References #1071: Installation wizard doesn't show error message The …
1:30 PM Changeset [5042] by Nicklas Nordborg
References #1071: Installation wizard doesn't show error message …
1:23 PM Changeset [5041] by Nicklas Nordborg
References #1071: Installation wizard doesn't show error message The …
1:20 PM Ticket #1071 (Installation wizard doesn't show error message) created by Nicklas Nordborg
If there is an error (that can't be fixed) in the installation wizard …
12:31 PM Changeset [5040] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
8:31 AM Changeset [5039] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?

Oct 18, 2018:

1:29 PM Ticket #1070 (The consent registration wizard doesn't check existing consent) created by Nicklas Nordborg
There is a case in the consent registration wizard that is not handled …

Oct 17, 2018:

5:30 PM Changeset [5038] by Jari Häkkinen
Adding open grid requirement
3:54 PM Changeset [5037] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
1:40 PM Changeset [5036] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
1:32 PM Changeset [5035] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
8:34 AM Changeset [5034] by olle
Refs #1029. Support for an "Arrival operator" annotation on sample …
8:17 AM Changeset [5033] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?

Oct 16, 2018:

3:35 PM Changeset [5032] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
2:09 PM Changeset [5031] by olle
Refs #1029. Support for a "Yellow label" annotation on sample items …
1:11 PM Changeset [5030] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
12:40 PM Changeset [5029] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?

Oct 15, 2018:

5:01 PM Changeset [5028] by olle
Refs #1029. FFPE block order form wizard updated to print bar codes …
4:31 PM Changeset [5027] by olle
Refs #1029. Base-line registration wizard for input from a …
2:13 PM Ticket #1069 (Reggie should check actual active roles and not just membership) closed by Nicklas Nordborg
fixed: (In [5026]) Fixes #1069: Reggie should check actual active roles and …
2:13 PM Changeset [5026] by Nicklas Nordborg
Fixes #1069: Reggie should check actual active roles and not just …
2:10 PM Ticket #1069 (Reggie should check actual active roles and not just membership) created by Nicklas Nordborg
This can be seen on the start page. Some wizards should be disabled if …
9:06 AM Changeset [5025] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
9:03 AM Changeset [5024] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …

Oct 12, 2018:

8:37 AM Changeset [5023] by Nicklas Nordborg
References #1067: Highlight related items in Case summary Fix scroll …

Oct 11, 2018:

3:13 PM Changeset [5022] by Nicklas Nordborg
References #1067: Highlight related items in Case summary Added a …
9:23 AM Changeset [5021] by Nicklas Nordborg
References #1067: Highlight related items in Case summary The "root …

Oct 10, 2018:

2:49 PM Changeset [5020] by Nicklas Nordborg
References #1067: Highlight related items in Case summary The …
2:48 PM Changeset [5019] by Nicklas Nordborg
References #1067: Highlight related items in Case summary Implemented …
9:34 AM Changeset [5018] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …

Oct 9, 2018:

3:28 PM Changeset [5017] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
9:27 AM Changeset [5016] by olle
Refs #1029. Support for "Whole blood" Boolean annotation for Case item …

Oct 8, 2018:

12:47 PM Changeset [5015] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie?
10:55 AM Ticket #1068 (Add mBAF analysis step to the Hisat/StringTie pipeline) created by Nicklas Nordborg
The Hisat/StringTie pipeline should be extended with a mBAF analysis …
10:34 AM Changeset [5014] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
9:48 AM Changeset [5013] by olle
Refs #1029. Support for PAD pre-entry removed. Also, title of consent …

Oct 5, 2018:

2:53 PM Changeset [5012] by Nicklas Nordborg
References #1067: Highlight related items in Case summary It should …
1:02 PM Changeset [5011] by Nicklas Nordborg
References #1067: Highlight related items in Case summary Basic …
11:16 AM Ticket #1067 (Highlight related items in Case summary) created by Nicklas Nordborg
For some cases there are multiple specimen that have been processed …

Oct 4, 2018:

1:27 PM Changeset [5010] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
1:25 PM Changeset [5009] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
12:36 PM Changeset [5008] by olle
Refs #1029. Updates due to version number change to "1.6.0-dev". …
12:07 PM Changeset [5007] by olle
Refs #1029. Updates due to version number change to "1.6.0a8". 1. …
12:04 PM Changeset [5006] by olle
Refs #1029. Referral generation updated for generation of FFPE …
11:34 AM Changeset [5005] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
11:20 AM Changeset [5004] by olle
Refs #1029. Wizard "FFPE block order form" in section "Personal …
10:52 AM Changeset [5003] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
9:41 AM Changeset [5002] by olle
Refs #1029. Base-line registration wizard updated to check if any …
8:36 AM Changeset [5001] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …

Oct 3, 2018:

4:58 PM Changeset [5000] by olle
Refs #1029. Base-line registration wizard updated to ask user for a …
2:29 PM Changeset [4999] by olle
Refs #1029. Boolean annotation "Whole blood" moved from Blood item to …
8:50 AM Changeset [4998] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
8:43 AM Changeset [4997] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
8:15 AM Ticket #1066 (Specimen tube registration wizard should allow different sampling and ...) closed by Nicklas Nordborg
fixed: (In [4996]) Fixes #1066: Specimen tube registration wizard should …
8:15 AM Changeset [4996] by Nicklas Nordborg
Fixes #1066: Specimen tube registration wizard should allow different …

Oct 2, 2018:

1:39 PM Ticket #1066 (Specimen tube registration wizard should allow different sampling and ...) created by Nicklas Nordborg
There are use cases were the sampling date is one day before the RNA …
12:47 PM Changeset [4995] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
8:45 AM Changeset [4994] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
8:20 AM Changeset [4993] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …

Oct 1, 2018:

12:46 PM Changeset [4992] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
10:55 AM Changeset [4991] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
9:38 AM Changeset [4990] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
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