Timeline
Mar 14, 2018:
- 2:52 PM Changeset [4694] by
- Changes for future release Labenv 1.7
- 2:50 PM Milestone LabEnv v1.6 completed
- See LabEnv extension page for more information.
- 2:50 PM PluginDownload edited by
- Released Labenv 1.6 (diff)
- 2:49 PM net.sf.basedb.labenv edited by
- Released Labenv 1.6 (diff)
- 2:46 PM Changeset [4693] by
- Tagging Labenv 1.6
- 2:45 PM Changeset [4692] by
- Prepering to release Labenv 1.6
Mar 13, 2018:
- 3:26 PM Ticket #1030 (The "Force update counters" icon on the Reggie start page feels ...) closed by
- fixed: (In [4691]) Fixes #1030: The "Force update counters" icon on the …
- 3:26 PM Changeset [4691] by
- Fixes #1030: The "Force update counters" icon on the Reggie start page …
- 1:28 PM Ticket #1031 (Define a genotype QC flag that can be set on alignments that has been ...) created by
- For example, we have matched the genotype of several alignments to …
Mar 12, 2018:
- 2:49 PM Ticket #1030 (The "Force update counters" icon on the Reggie start page feels ...) created by
- The time it takes for Reggie to update the counters on the start page …
Mar 9, 2018:
- 10:31 AM Changeset [4690] by
-
Refs #911. Updates due to version number change to "
1.5.0". 1. …
Mar 8, 2018:
- 1:35 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) created by
- MeLuDI should be adapted to support the SCAN-B-rec project. Initially …
- 1:14 PM Ticket #911 (MeLuDI should support multiple projects) closed by
- fixed: Ticket closed as multiple project support to MeLuDI has been added, …
Feb 27, 2018:
- 1:12 PM Changeset [4689] by
- References #1025: Release exporter should support StringTie? data …
- 7:53 AM Ticket #1027 (External samples and Stratagene should not be part of genotyping qc) closed by
- fixed: (In [4688]) Fixes #1027: External samples and Stratagene should not be …
- 7:53 AM Changeset [4688] by
- Fixes #1027: External samples and Stratagene should not be part of …
Feb 26, 2018:
- 3:31 PM Ticket #1017 (Remove code for handling optional MaskedSequences) closed by
- fixed
- 3:02 PM Changeset [4687] by
- References #1026: Create wizard for secondary analysis cleanup …
- 1:25 PM Ticket #1028 (Add support for StringTie data) created by
- The relax server is currently only supporting "cufflinks" raw …
- 12:58 PM Ticket #1027 (External samples and Stratagene should not be part of genotyping qc) created by
- The genotyping qc rely on being able to identify samples belonging to …
Feb 23, 2018:
- 11:33 AM Changeset [4686] by
- References #1017: Remove code for handling optional MaskedSequences? …
- 9:21 AM Ticket #1026 (Create wizard for secondary analysis cleanup) created by
- There are times when, for example, a demux or alignment needs to be …
- 9:04 AM Changeset [4685] by
- References #1017: Remove code for handling optional MaskedSequences? …
- 8:23 AM Ticket #1025 (Release exporter should support StringTie data) created by
- The current implementation of the release exporter only supports …
Feb 22, 2018:
- 3:30 PM Ticket #1024 (Create annotation type definitions for INCA 2.0) created by
- INCA has been updated to version 2.0. Most variables have been …
- 3:08 PM Ticket #1023 (Release exporter changes due to INCA 2.0) created by
- INCA has been updated to version 2.0. Most variables have been …
- 3:05 PM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) created by
- INCA has been updated to version 2.0. Most variables have been …
- 2:53 PM Ticket #1021 (Add INCA 2.0 columns to the blacklist) created by
- INCA has been updated to version 2.0. Most variables have been …
- 9:37 AM net.sf.basedb.reggie/notes415 edited by
- More details about deleting alignments (diff)
- 9:31 AM net.sf.basedb.reggie/HistoryOfReggie edited by
- (diff)
- 9:22 AM Changeset [4684] by
- Preparing for future release Reggie 4.16
- 9:20 AM Milestone Reggie v4.15 completed
- See Reggie extension page for more information.
- 9:19 AM PluginDownload edited by
- Released Reggie 4.15 (diff)
- 9:18 AM net.sf.basedb.reggie edited by
- Released Reggie 4.15 (diff)
- 9:14 AM Ticket #1009 (Genotype quality control wizard) closed by
- fixed
- 9:13 AM Changeset [4683] by
- Tagging Reggie 4.15
- 9:12 AM Changeset [4682] by
- Preparing to release Reggie 4.15
Feb 21, 2018:
- 3:46 PM Changeset [4681] by
- References #1009: Genotype quality control wizard Removed the …
- 11:51 AM net.sf.basedb.reggie/notes415 edited by
- Update note related to #1015 (diff)
- 11:47 AM Changeset [4680] by
- References #1015: Add masking step to Hisat pipeline Added a wizard …
Feb 20, 2018:
- 9:09 AM net.sf.basedb.reggie edited by
- (diff)
- 9:07 AM net.sf.basedb.reggie/notes415 edited by
- Added note about BASE update. (diff)
Feb 15, 2018:
- 11:41 AM Ticket #1020 (Change novel-splicesite-outfile parameter to Hisat) closed by
- fixed: (In [4679]) Fixes #1020: Change novel-splicesite-outfile parameter to Hisat
- 11:41 AM Changeset [4679] by
- Fixes #1020: Change novel-splicesite-outfile parameter to Hisat
- 11:40 AM Ticket #1020 (Change novel-splicesite-outfile parameter to Hisat) created by
-
The current value is
novel-splicesites.tsv. This should be changed …
Feb 12, 2018:
- 9:53 AM Ticket #1018 (Updates to HaplotypeCaller step) closed by
- fixed
- 9:52 AM Ticket #1016 (Implement Stringtie step in the Hisat pipeline) closed by
- fixed
- 9:51 AM Changeset [4678] by
- References #1009: Genotype quality control wizard Layout changes to …
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