Timeline
Nov 11, 2015:
- 4:47 PM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by
- (In [3591]) Refs #816. Wizard "Lab tracking protocol for FFPE …
- 4:47 PM Changeset [3591] by
- Refs #816. Wizard "Lab tracking protocol for FFPE extraction" in …
- 4:45 PM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by
- Functional specification update: * Wizard "Lab tracking protocol for …
- 2:49 PM Ticket #828 (PoolSchema=1by16offset is not installed by the installation wizard) created by
- Trying to use the new Pool schema '1by16offset' that was implemented …
- 1:47 PM Tickets #801,816 batch updated by
- (In [3590]) Refs #801. Refs #816. Wizard "Create new start DNA plate" …
- 1:47 PM Changeset [3590] by
- Refs #801. Refs #816. Wizard "Create new start DNA plate" updated …
- 8:29 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * The update of wizard "Create new …
- 12:09 AM Changeset [3589] by
- Restoring svn:eol-style to LF
Nov 10, 2015:
- 3:32 PM Ticket #827 (Implement support for YellowLabel in the specimen tube registration wizard) updated by
-
Priority changed
- 3:32 PM Ticket #785 (Separate project archive folder for external samples) updated by
-
Priority changed
- 3:32 PM Ticket #825 (Optimize library preparation and sequencing wizards for NextSeq) updated by
-
Status, Priority changed
- 3:19 PM Ticket #827 (Implement support for YellowLabel in the specimen tube registration wizard) updated by
-
Description changed
- 2:42 PM Changeset [3588] by
- Updated Reggie version to 4.0-dev
- 2:02 PM Tickets #413,476,510,525,532,584,585,586,634,695,752,770,771 batch updated by
-
Milestone changed
Milestone renamed - 2:02 PM Ticket #771 (Yellow label highlighting a representative specimen) updated by
-
Description changed
- 2:01 PM Ticket #827 (Implement support for YellowLabel in the specimen tube registration wizard) created by
- This is part 1 of #771. The specimen tube registration wizard should …
- 1:59 PM Ticket #771 (Yellow label highlighting a representative specimen) updated by
-
Description changed
Renamed theRepresentativeSpecimenannotation toYellowLabel. - 1:50 PM Ticket #826 (Auto-create mRNA plate wizard) created by
- While the current create mRNA plate wizard is powerful it is also …
- 1:31 PM Ticket #825 (Optimize library preparation and sequencing wizards for NextSeq) created by
- Several wizards in the library preparation and sequencing sections was …
- 1:16 PM Ticket #785 (Separate project archive folder for external samples) updated by
-
Priority, Description, Milestone changed
- 1:02 PM Tickets #782,783,823,824 batch updated by
-
Milestone changed
Milestone renamed - 8:25 AM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by
- (In [3587]) Refs #816. Bug fixed in default cell text in extraction …
- 8:25 AM Changeset [3587] by
- Refs #816. Bug fixed in default cell text in extraction protocol table …
Nov 9, 2015:
- 5:31 PM Ticket #824 (fix_tophat_unmapped_reads.py has been renamed to tophat-recondition.py) updated by
- The old script was replaced the new in …
- 5:28 PM Changeset [3586] by
- Fixing svn:eol-style
- 5:24 PM Changeset [3585] by
- Updating post-alingment script to latest released version. The script …
- 3:42 PM Changeset [3584] by
- Fixing svndigest&svncopyright properties
- 3:38 PM Changeset [3583] by
- Fixing Id keyword
- 1:21 PM Ticket #824 (fix_tophat_unmapped_reads.py has been renamed to tophat-recondition.py) created by
-
The
fix_tophat_unmapped_reads.pyscript is used in the alignment … - 1:18 PM Ticket #823 (Do not include items with only Read permission in selection lists) created by
- In several Reggie wizards it is possible to select protocol, hardware …
Nov 6, 2015:
- 2:13 PM Tickets #801,816 batch updated by
- (In [3582]) Refs #801. Refs #816. Wizard "Create new start DNA plate" …
- 2:13 PM Changeset [3582] by
- Refs #801. Refs #816. Wizard "Create new start DNA plate" updated in …
- 2:11 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Wizard "Create new start DNA …
- 11:26 AM Changeset [3581] by
- Merge changes in Reggie 3.7.1 to the trunk.
- 11:21 AM Milestone Reggie v3.7.1 completed
- Bug fixes for Reggie 3.7. Revision Log: …
- 11:20 AM PluginDownload edited by
- Released Reggie 3.7.1 (diff)
- 11:20 AM net.sf.basedb.reggie edited by
- Released Reggie 3.7.1 (diff)
- 11:17 AM Changeset [3580] by
- Tagging Reggie 3.7.1
- 11:16 AM Changeset [3579] by
- Preparing to release Reggie 3.7.1
- 11:14 AM Ticket #822 (Fix character encoding problems with R scripts) closed by
- fixed: (In [3578]) Fixes #822: Fix character encoding problems with R scripts …
- 11:14 AM Changeset [3578] by
- Fixes #822: Fix character encoding problems with R scripts Calling …
- 9:41 AM Ticket #822 (Fix character encoding problems with R scripts) created by
- When testing the pilot report R script on the production server it …
- 9:30 AM Tickets #801,816 batch updated by
- (In [3577]) Refs #801. Refs #816. Wizard "Create new start DNA plate" …
- 9:30 AM Changeset [3577] by
- Refs #801. Refs #816. Wizard "Create new start DNA plate" in section …
- 9:26 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Design update for modified empirical rules for placing FPA aliquots on …
- 8:45 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Update of empirical rules for placing FPA aliquots on a start plate: …
- 8:10 AM Changeset [3576] by
- Creating bugfix branch for Reggie 3.7
Nov 5, 2015:
- 1:58 PM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by
- (In [3575]) Refs #816. Wizard "Create label file for a number of new …
- 1:58 PM Changeset [3575] by
- Refs #816. Wizard "Create label file for a number of new cases" in …
- 1:56 PM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by
- Functional specification update: * Wizard "Create label file for a …
- 9:48 AM Tickets #801,816 batch updated by
- (In [3574]) Refs #801. Refs #816. Wizard "Create new start DNA plate" …
- 9:48 AM Changeset [3574] by
- Refs #801. Refs #816. Wizard "Create new start DNA plate" updated …
- 9:47 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Wizard "Create new start DNA …
- 8:52 AM Tickets #801,816 batch updated by
- (In [3573]) Refs #801. Refs #816. Wizard "Create new start DNA plate" …
- 8:52 AM Changeset [3573] by
- Refs #801. Refs #816. Wizard "Create new start DNA plate" in section …
Nov 4, 2015:
- 3:47 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Design update for selecting library preparation kit and placing …
Nov 2, 2015:
- 8:32 AM Ticket #783 (Switch to Java 8) updated by
- (In [3572]) References #783: Switch to Java 8 Getting rid of some …
- 8:32 AM Changeset [3572] by
- References #783: Switch to Java 8 Getting rid of some warnings …
Oct 30, 2015:
- 9:12 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Empirical rules for placing FPA aliquots on a start plate: * …
- 8:38 AM Ticket #782 (Fix compilation error when compiling against BASE 3.6) closed by
- fixed: (In [3571]) Fixes #782: Fix compilation error when compiling against …
- 8:38 AM Changeset [3571] by
- Fixes #782: Fix compilation error when compiling against BASE 3.6 …
- 8:36 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Section "Library preparation …
- 7:24 AM Ticket #782 (Fix compilation error when compiling against BASE 3.6) updated by
-
Status changed
- 7:20 AM Ticket #783 (Switch to Java 8) closed by
- fixed: (In [3570]) Fixes #783: Switch to Java 8
- 7:20 AM Changeset [3570] by
- Fixes #783: Switch to Java 8
- 7:17 AM Ticket #783 (Switch to Java 8) updated by
-
Status changed
Oct 29, 2015:
- 11:41 AM net.sf.basedb.reggie/HistoryOfReggie edited by
- (diff)
- 11:33 AM Changeset [3569] by
- Preparing for future release Reggie 3.8
- 11:32 AM Milestone Reggie v3.7 completed
- See Reggie extension page for more information.
- 11:32 AM PluginDownload edited by
- Released Reggie 3.7 (diff)
- 11:31 AM net.sf.basedb.reggie edited by
- Released Reggie 3.7 (diff)
- 11:27 AM Changeset [3568] by
- Tagging Reggie 3.7
- 11:25 AM Changeset [3567] by
- Preparing to release Reggie 3.7
- 11:03 AM Ticket #810 (Gene report combiner plug-in should be able to combine to a zip file) closed by
- fixed
- 9:43 AM Ticket #812 (Pilot report wizard) closed by
- fixed
- 9:35 AM Ticket #810 (Gene report combiner plug-in should be able to combine to a zip file) updated by
- (In [3566]) References #810: Gene report combiner plug-in should be …
- 9:35 AM Changeset [3566] by
- References #810: Gene report combiner plug-in should be able to …
Oct 28, 2015:
- 2:46 PM Ticket #818 (Track volumes of RNAQC aliquots) closed by
- fixed
- 2:45 PM Ticket #821 (Remote registration of RunParameters.xml in Register sequencing ...) updated by
- (In [3565]) References #821: Remote registration of RunParameters.xml …
- 2:45 PM Changeset [3565] by
- References #821: Remote registration of RunParameters.xml in Register …
- 1:57 PM Ticket #821 (Remote registration of RunParameters.xml in Register sequencing ...) closed by
- fixed: (In [3564]) Fixes #821: Remote registration of RunParameters.xml in …
- 1:57 PM Changeset [3564] by
- Fixes #821: Remote registration of RunParameters.xml in Register …
- 9:14 AM Ticket #821 (Remote registration of RunParameters.xml in Register sequencing ...) created by
- The "Register sequencing started" requires that the …
- 8:04 AM Ticket #810 (Gene report combiner plug-in should be able to combine to a zip file) updated by
- (In [3563]) References #810: Gene report combiner plug-in should be …
- 8:04 AM Changeset [3563] by
- References #810: Gene report combiner plug-in should be able to …
Oct 27, 2015:
- 2:05 PM Ticket #810 (Gene report combiner plug-in should be able to combine to a zip file) reopened by
- Re-opening this ticket in order to add support for password-protected …
- 8:54 AM Tickets #801,816 batch updated by
- (In [3562]) Refs #801. Refs #816. Bug fix: JSP file …
- 8:54 AM Changeset [3562] by
-
Refs #801. Refs #816. Bug fix: JSP file
edit_libprep_kit_details.jsp… - 8:42 AM Tickets #801,816 batch updated by
- (In [3561]) Refs #801. Refs #816. JSP file …
- 8:42 AM Changeset [3561] by
-
Refs #801. Refs #816. JSP file
inspect_lib_prep_kit_data.jspand … - 8:03 AM Tickets #801,816 batch updated by
- (In [3560]) Refs #801. Refs #816. Wizard "Inspect library preparation …
- 8:03 AM Changeset [3560] by
- Refs #801. Refs #816. Wizard "Inspect library preparation kit data" in …
Oct 26, 2015:
- 4:45 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Wizard "Inspect library …
Oct 22, 2015:
- 1:59 PM Ticket #817 (Always display rna box position in normalization protocol) updated by
- (In [3559]) References #817: Always display rna box position in …
- 1:59 PM Changeset [3559] by
- References #817: Always display rna box position in normalization …
Oct 21, 2015:
- 2:16 PM Ticket #818 (Track volumes of RNAQC aliquots) updated by
- (In [3558]) References #818: Track volumes of RNAQC aliquots Adding …
- 2:16 PM Changeset [3558] by
- References #818: Track volumes of RNAQC aliquots Adding files for the …
- 2:13 PM Ticket #812 (Pilot report wizard) updated by
- (In [3557]) References #812: Pilot report wizard Adding "Pilot …
- 2:13 PM Changeset [3557] by
- References #812: Pilot report wizard Adding "Pilot report" thumbnail …
- 2:12 PM Ticket #812 (Pilot report wizard) updated by
- (In [3556]) References #812: Pilot report wizard Adjusting text and …
- 2:12 PM Changeset [3556] by
- References #812: Pilot report wizard Adjusting text and plot …
- 8:50 AM Ticket #818 (Track volumes of RNAQC aliquots) updated by
- (In [3555]) References #818: Track volumes of RNAQC aliquots The …
- 8:50 AM Changeset [3555] by
- References #818: Track volumes of RNAQC aliquots The 'Import RQS …
Oct 20, 2015:
- 3:48 PM Tickets #801,816 batch updated by
- (In [3554]) Refs #801. Refs #816. Sub-section "Reagent kit management …
- 3:48 PM Changeset [3554] by
- Refs #801. Refs #816. Sub-section "Reagent kit management wizards" is …
- 3:46 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Sub-section "Reagent kit …
- 1:00 PM Tickets #801,816 batch updated by
- (In [3553]) Refs #801. Refs #816. Wizards "Add new consumables lot …
- 1:00 PM Changeset [3553] by
- Refs #801. Refs #816. Wizards "Add new consumables lot number file" …
- 12:52 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Design update: * Wizards "Add new consumables lot number file" and …
- 11:29 AM Tickets #801,816 batch updated by
- (In [3552]) Refs #801. Refs #816. Wizard "Add new consumables lot …
- 11:29 AM Changeset [3552] by
- Refs #801. Refs #816. Wizards "Add new consumables lot number file" …
- 11:27 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Wizard "Add new consumables lot …
- 11:00 AM Tickets #801,816 batch updated by
- (In [3551]) Refs #801. Refs #816. Wizard "Add new consumables lot …
- 11:00 AM Changeset [3551] by
- Refs #801. Refs #816. Wizard "Add new consumables lot number file" in …
- 10:55 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Wizard "Add new consumables lot …
Oct 19, 2015:
- 1:57 PM Ticket #819 (Printable lab protocol from Create aliquots on Bioanalyzer/Caliper ...) closed by
- fixed
- 1:56 PM Ticket #818 (Track volumes of RNAQC aliquots) updated by
- (In [3550]) References #818: Track volumes of RNAQC aliquots …
- 1:56 PM Changeset [3550] by
- References #818: Track volumes of RNAQC aliquots Bioanalyzer volume …
- 11:48 AM Ticket #820 (Add "Inconclusive" as an option to the IHCQuality annotation) closed by
- fixed: (In [3549]) Fixes #820: Add "Inconclusive" as an option to the …
- 11:48 AM Changeset [3549] by
- Fixes #820: Add "Inconclusive" as an option to the IHCQuality annotation
- 11:43 AM Ticket #812 (Pilot report wizard) updated by
- (In [3548]) References #812: Pilot report wizard Adjusting text and …
- 11:43 AM Changeset [3548] by
- References #812: Pilot report wizard Adjusting text and plot …
- 11:11 AM Ticket #820 (Add "Inconclusive" as an option to the IHCQuality annotation) created by
- The installation wizard should install this option and the scoring …
- 11:01 AM Ticket #818 (Track volumes of RNAQC aliquots) updated by
-
Description changed
- 10:59 AM Tickets #782,783 batch updated by
-
Milestone changed
- 8:40 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Design update: * 2015-10-16 it was decided to extend BASE with a new …
Oct 16, 2015:
- 11:53 AM Tickets #801,816 batch updated by
- (In [3547]) Refs #801. Refs #816. Sub-section "Reagent kit management …
- 11:53 AM Changeset [3547] by
- Refs #801. Refs #816. Sub-section "Reagent kit management wizards" …
- 11:27 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Sub-section "Reagent kit …
- 10:30 AM Tickets #801,816 batch updated by
- (In [3546]) Refs #801. Refs #816. Wizard "Add new consumables lot …
- 10:30 AM Changeset [3546] by
- Refs #801. Refs #816. Wizard "Add new consumables lot number file" in …
- 10:28 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Wizard "Add new consumables lot …
- 9:55 AM Ticket #818 (Track volumes of RNAQC aliquots) updated by
- (In [3545]) References #818: Track volumes of RNAQC aliquots Changes …
- 9:55 AM Changeset [3545] by
- References #818: Track volumes of RNAQC aliquots Changes the default …
Oct 15, 2015:
- 10:47 AM Ticket #818 (Track volumes of RNAQC aliquots) updated by
-
Status, Description changed
- 10:46 AM Ticket #819 (Printable lab protocol from Create aliquots on Bioanalyzer/Caliper ...) updated by
- (In [3544]) References #819: Printable lab protocol from Create …
- 10:46 AM Changeset [3544] by
- References #819: Printable lab protocol from Create aliquots on …
Oct 14, 2015:
- 2:11 PM Ticket #812 (Pilot report wizard) updated by
- (In [3543]) References #812: Pilot report wizard Minor adjusments to …
- 2:11 PM Changeset [3543] by
- References #812: Pilot report wizard Minor adjusments to text …
- 1:52 PM Ticket #818 (Track volumes of RNAQC aliquots) updated by
- Default RNAQC volumes for normal and HiSense are 2 µl and 6 µl …
- 12:36 PM Ticket #819 (Printable lab protocol from Create aliquots on Bioanalyzer/Caliper ...) updated by
-
Status changed
- 9:51 AM Ticket #812 (Pilot report wizard) updated by
- (In [3542]) References #812: Pilot report wizard Importing the …
- 9:51 AM Changeset [3542] by
- References #812: Pilot report wizard Importing the …
- 9:35 AM Ticket #812 (Pilot report wizard) updated by
- (In [3541]) References #812: Pilot report wizard Setting R source …
- 9:35 AM Changeset [3541] by
- References #812: Pilot report wizard Setting R source encoding to …
Oct 13, 2015:
- 4:45 PM Tickets #801,816 batch updated by
- (In [3540]) Refs #801. Refs #816. Updates due to version number change …
- 4:45 PM Changeset [3540] by
- Refs #801. Refs #816. Updates due to version number change to …
- 4:09 PM Tickets #801,816 batch updated by
- (In [3539]) Refs #801. Refs #816. Updates due to version number change …
- 4:09 PM Changeset [3539] by
- Refs #801. Refs #816. Updates due to version number change to …
- 3:59 PM Tickets #801,816 batch updated by
- (In [3538]) Refs #801. Refs #816. Sub-section "Reagent kit management …
- 3:59 PM Changeset [3538] by
- Refs #801. Refs #816. Sub-section "Reagent kit management wizards" is …
- 3:56 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Sub-section "Reagent kit …
- 1:59 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Section "Library preparation …
- 1:31 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Placeholder for new decisions regarding extract placement on library …
- 1:20 PM Tickets #801,816 batch updated by
- (In [3537]) Refs #801. Refs #816. Wizard "Create new start DNA plate" …
- 1:20 PM Changeset [3537] by
- Refs #801. Refs #816. Wizard "Create new start DNA plate" updated in …
- 1:19 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * Wizard "Create new start DNA …
- 12:11 PM Tickets #801,816 batch updated by
- (In [3536]) Refs #801. Refs #816. It has been decided not to use role …
- 12:11 PM Changeset [3536] by
- Refs #801. Refs #816. It has been decided not to use role …
- 12:09 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by
- Functional specification update: * It has been decided not to use …
- 11:53 AM Ticket #819 (Printable lab protocol from Create aliquots on Bioanalyzer/Caliper ...) created by
- The third step in this wizard contains information that is needed in …
- 11:50 AM Ticket #818 (Track volumes of RNAQC aliquots) created by
- The original quantity assigned to RNA items currently assumes that a …
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