Timeline



Feb 9, 2015:

2:46 PM Ticket #736 (Some HE glass may be stained with something else than HE) updated by Nicklas Nordborg
(In [3125]) References #736: Some HE glass may be stained with …
2:46 PM Changeset [3125] by Nicklas Nordborg
References #736: Some HE glass may be stained with something else than …
12:33 PM Ticket #737 (Show last update date+time for counters) closed by Nicklas Nordborg
fixed: (In [3124]) Fixes #737: Show last update date+time for counters Added …
12:33 PM Changeset [3124] by Nicklas Nordborg
Fixes #737: Show last update date+time for counters Added a short …
11:36 AM Ticket #737 (Show last update date+time for counters) created by Nicklas Nordborg
The counters on the main page are no longer updated in real time (see …
9:26 AM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3123]) Refs #725. Specimen tube registration updated in the set …
9:26 AM Changeset [3123] by olle
Refs #725. Specimen tube registration updated in the set of mutation …
9:15 AM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
Functional specification update: * The set of mutation analysis …

Feb 6, 2015:

3:48 PM Ticket #736 (Some HE glass may be stained with something else than HE) updated by johan
Perhaps add a check in the last step of 'Register HE glass' wizard to …
3:22 PM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3122]) Refs #725. MeLuDi updated to use BASE version "3.4.0" …
3:22 PM Changeset [3122] by olle
Refs #725. MeLuDi updated to use BASE version "3.4.0" instead of …
3:02 PM Ticket #736 (Some HE glass may be stained with something else than HE) updated by Nicklas Nordborg
(In [3121]) References #736: Some HE glass may be stained with …
3:02 PM Changeset [3121] by Nicklas Nordborg
References #736: Some HE glass may be stained with something else than …
2:48 PM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3120]) Refs #725. Case summary updated further to ensure that …
2:48 PM Changeset [3120] by olle
Refs #725. Case summary updated further to ensure that titles fit on a …
1:44 PM Ticket #736 (Some HE glass may be stained with something else than HE) updated by Nicklas Nordborg
Description changed
1:42 PM Ticket #736 (Some HE glass may be stained with something else than HE) created by Nicklas Nordborg
The number of HE glass slides created are registered with the …
1:33 PM Ticket #735 (Can't modify number of slides created in the HE glass registration wizard) closed by Nicklas Nordborg
fixed: (In [3119]) Fixes #735: Can't modify number of slides created in the …
1:33 PM Changeset [3119] by Nicklas Nordborg
Fixes #735: Can't modify number of slides created in the HE glass …
1:17 PM Ticket #735 (Can't modify number of slides created in the HE glass registration wizard) created by Nicklas Nordborg
If the default value for HE glass slides (=2) is modified the wizard …
1:15 PM Ticket #629 (Use annotations on protocols in the demux and mask/align step to set ...) updated by Nicklas Nordborg
(In [3118]) References #629: Use annotations on protocols in the demux …
1:15 PM Changeset [3118] by Nicklas Nordborg
References #629: Use annotations on protocols in the demux and …
11:38 AM Ticket #629 (Use annotations on protocols in the demux and mask/align step to set ...) updated by Nicklas Nordborg
(In [3117]) References #629: Use annotations on protocols in the demux …
11:38 AM Changeset [3117] by Nicklas Nordborg
References #629: Use annotations on protocols in the demux and …
11:04 AM Ticket #629 (Use annotations on protocols in the demux and mask/align step to set ...) updated by Nicklas Nordborg
(In [3116]) References #629: Use annotations on protocols in the demux …
11:04 AM Changeset [3116] by Nicklas Nordborg
References #629: Use annotations on protocols in the demux and …
8:46 AM Ticket #629 (Use annotations on protocols in the demux and mask/align step to set ...) updated by Nicklas Nordborg
(In [3115]) References #629: Use annotations on protocols in the demux …
8:46 AM Changeset [3115] by Nicklas Nordborg
References #629: Use annotations on protocols in the demux and …

Feb 5, 2015:

1:21 PM Ticket #629 (Use annotations on protocols in the demux and mask/align step to set ...) updated by Nicklas Nordborg
(In [3114]) References #629: Use annotations on protocols in the demux …
1:21 PM Changeset [3114] by Nicklas Nordborg
References #629: Use annotations on protocols in the demux and …
9:32 AM Ticket #629 (Use annotations on protocols in the demux and mask/align step to set ...) updated by Nicklas Nordborg
Status, Milestone changed
I have been thinking about this and it feels a bit uncomfortable to …

Feb 4, 2015:

6:23 PM Changeset [3113] by Jari Häkkinen
Make svndigest ignore branches directory structure
2:39 PM Ticket #730 (Set target molarity in "Create pooled libraries" wizard) closed by Nicklas Nordborg
fixed
11:06 AM Ticket #734 (The create new mRNA plate wizard should reset RNA marked for re-processing) closed by Nicklas Nordborg
fixed: (In [3112]) Fixes #734: The create new mRNA plate wizard should reset …
11:06 AM Changeset [3112] by Nicklas Nordborg
Fixes #734: The create new mRNA plate wizard should reset RNA marked …
10:36 AM Ticket #734 (The create new mRNA plate wizard should reset RNA marked for re-processing) created by Nicklas Nordborg
The auto-selection functionality contains an option for selecting RNA …
9:04 AM Ticket #731 (Installation wizard should enable AutoProcessing annotation for raw ...) closed by Nicklas Nordborg
fixed: (In [3111]) Fixes #731: Installation wizard should enable …
9:04 AM Changeset [3111] by Nicklas Nordborg
Fixes #731: Installation wizard should enable AutoProcessing
9:00 AM Ticket #732 (Software item on aligned sequences is not set) closed by Nicklas Nordborg
fixed: (In [3110]) Fixes #732: Software item on aligned sequences is not set …
9:00 AM Changeset [3110] by Nicklas Nordborg
Fixes #732: Software item on aligned sequences is not set There was …
8:55 AM Ticket #733 (The create pools wizard create pools with roman numerals as name) closed by Nicklas Nordborg
fixed: (In [3109]) Fixes #733: The create pools wizard create pools with …
8:55 AM Changeset [3109] by Nicklas Nordborg
Fixes #733: The create pools wizard create pools with roman numerals …
8:32 AM Ticket #733 (The create pools wizard create pools with roman numerals as name) updated by Nicklas Nordborg
I am not able to directly reproduce this, but there is a possible race …

Feb 3, 2015:

3:51 PM Ticket #733 (The create pools wizard create pools with roman numerals as name) updated by Nicklas Nordborg
Summary changed
3:51 PM Ticket #733 (The create pools wizard create pools with roman numerals as name) created by Nicklas Nordborg
The wizard display the names that should be used, but seems not to …
3:49 PM Ticket #732 (Software item on aligned sequences is not set) created by Nicklas Nordborg
The selected software item in the 'Start masking and alignment' wizard …

Feb 2, 2015:

11:15 AM Ticket #731 (Installation wizard should enable AutoProcessing annotation for raw ...) created by Nicklas Nordborg
Trying to start a new cufflinks job with the "Auto-confirm" option in …

Jan 28, 2015:

12:51 PM PluginDownload edited by Nicklas Nordborg
Released Print package 1.2 (diff)

Jan 27, 2015:

1:16 PM Ticket #730 (Set target molarity in "Create pooled libraries" wizard) updated by Nicklas Nordborg
(In [3108]) References #730: Set target molarity in "Create pooled …
1:16 PM Changeset [3108] by Nicklas Nordborg
References #730: Set target molarity in "Create pooled libraries" …
8:39 AM Ticket #730 (Set target molarity in "Create pooled libraries" wizard) updated by Nicklas Nordborg
(In [3107]) References #730: Set target molarity in "Create pooled …
8:39 AM Changeset [3107] by Nicklas Nordborg
References #730: Set target molarity in "Create pooled libraries" …
7:53 AM Ticket #730 (Set target molarity in "Create pooled libraries" wizard) updated by Nicklas Nordborg
Status changed

Jan 26, 2015:

2:53 PM Ticket #730 (Set target molarity in "Create pooled libraries" wizard) created by Nicklas Nordborg
In the current wizard, the target molarity is fixed at 2nM. This was …
1:42 PM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3106]) Refs #725. Bug not allowing null values for the …
1:42 PM Changeset [3106] by olle
Refs #725. Bug not allowing null values for the estimated part of …

Jan 23, 2015:

11:01 AM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3105]) Refs #725. Sample and extract registration wizards updated …
11:01 AM Changeset [3105] by olle
Refs #725. Sample and extract registration wizards updated to support …
9:44 AM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3104]) Refs #725. Bug fixed in wizard for registering a new case …
9:44 AM Changeset [3104] by olle
Refs #725. Bug fixed in wizard for registering a new case without …
9:40 AM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
Bug to be fixed: * The wizard for registering a new case without …

Jan 22, 2015:

8:58 AM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3103]) Refs #725. MeLuDi updated to display a counter value next …
8:58 AM Changeset [3103] by olle
Refs #725. MeLuDi updated to display a counter value next to the …
8:53 AM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
Functional specification update: * MeLuDi should be updated to …

Jan 21, 2015:

3:49 PM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3102]) Refs #725. MeLuDi updated in servlets to not use full …
3:49 PM Changeset [3102] by olle
Refs #725. MeLuDi updated in servlets to not use full class name …
3:38 PM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3101]) Refs #725. MeLuDi updated in servlets managing items to …
3:37 PM Changeset [3101] by olle
Refs #725. MeLuDi updated in servlets managing items to call …
2:14 PM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
(In [3100]) Refs #725. MeLuDi updated with a Counter service of the …
2:14 PM Changeset [3100] by olle
Refs #725. MeLuDi updated with a Counter service of the same type as …
2:13 PM Ticket #725 (MeLuDi v.1.1 bug fixes and improvements) updated by olle
Functional specification update: * MeLuDi should be updated with a …
8:01 AM Ticket #729 (Check YubiKey password before user password) created by Nicklas Nordborg
The current implementation we first check if the regular user password …

Jan 20, 2015:

9:00 AM Changeset [3099] by Nicklas Nordborg
Updating Picard wrapper script to make it compatible with Picard 1.128 …

Jan 19, 2015:

3:01 PM reggie-3.0.png attached to net.sf.basedb.reggie/HistoryOfReggie by Nicklas Nordborg
Reggie 3.0
3:00 PM net.sf.basedb.reggie/HistoryOfReggie edited by Nicklas Nordborg
(diff)
2:56 PM PluginDownload edited by Nicklas Nordborg
Released Reggie 3.0 (diff)
2:54 PM Changeset [3098] by Nicklas Nordborg
Preparing for future release Reggie 3.1
2:52 PM Milestone Reggie v3.0 completed
Improvements towards streamlining secondary analysis. See …
2:51 PM Ticket #723 (Retraction wizard - Step 2: Follow up) closed by Nicklas Nordborg
fixed
2:51 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 3.0 (diff)
2:50 PM reggie-3.0.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 3.0
2:47 PM Changeset [3097] by Nicklas Nordborg
Tagging Reggie 3.0
2:47 PM Changeset [3096] by Nicklas Nordborg
Preparing to release Reggie 3.0
2:44 PM Changeset [3095] by Nicklas Nordborg
Removing debug code.
2:34 PM Changeset [3094] by Nicklas Nordborg
Fixing typo.
2:16 PM Changeset [3093] by Nicklas Nordborg
Removing unused code.
2:11 PM Changeset [3092] by Nicklas Nordborg
Removing unused code.

Jan 15, 2015:

2:41 PM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
(In [3091]) Refs #723. Retraction follow-up wizard updated by using …
2:41 PM Changeset [3091] by olle
Refs #723. Retraction follow-up wizard updated by using shorter names …
2:15 PM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
(In [3090]) Refs #723. Retraction follow-up wizard updated by using …
2:15 PM Changeset [3090] by olle
Refs #723. Retraction follow-up wizard updated by using Javascript …
1:52 PM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
(In [3089]) Refs #723. Retraction follow-up wizard updated to disable …
1:52 PM Changeset [3089] by olle
Refs #723. Retraction follow-up wizard updated to disable step 1 part …
11:46 AM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
(In [3088]) Refs #723. Retraction follow-up wizard updated to disable …
11:46 AM Changeset [3088] by olle
Refs #723. Retraction follow-up wizard updated to disable step 1 part …
10:47 AM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
(In [3087]) Refs #723. Retraction follow-up wizard updated by removal …
10:47 AM Changeset [3087] by olle
Refs #723. Retraction follow-up wizard updated by removal of CSS file …
9:53 AM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
(In [3086]) Refs #723. Retraction follow-up wizard updated to use own …
9:53 AM Changeset [3086] by olle
Refs #723. Retraction follow-up wizard updated to use own CSS file, in …
8:39 AM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
(In [3085]) Refs #723. First version of second step of the retraction …
8:39 AM Changeset [3085] by olle
Refs #723. First version of second step of the retraction wizard, …
8:35 AM Changeset [3084] by Nicklas Nordborg
Preparing for future release Print package 1.3
8:34 AM Milestone Print package v1.2 completed
See Print package extension page for more …
8:34 AM net.sf.basedb.print edited by Nicklas Nordborg
Released Print package 1.2 (diff)
8:32 AM base-print-1.2.tar.gz attached to net.sf.basedb.print by Nicklas Nordborg
Print package 1.2
8:32 AM Changeset [3083] by Nicklas Nordborg
Tagging Print package 1.2
8:32 AM Changeset [3082] by Nicklas Nordborg
Preparing to release Print package 1.2.
8:30 AM Ticket #728 (Get rid of SQLite) created by Nicklas Nordborg
In #706 we moved the labenv database from SQLite into the BASE …
8:27 AM PluginDownload edited by Nicklas Nordborg
Released Labenv 1.3 (diff)
8:26 AM PluginDownload edited by Nicklas Nordborg
Released example code 1.7 (diff)
8:25 AM Changeset [3081] by Nicklas Nordborg
Preparing for future release of labenv 1.4
8:25 AM Milestone LabEnv v1.3 completed
Further update of the LabEnv extension to BASE, a package allowing …
8:24 AM net.sf.basedb.labenv edited by Nicklas Nordborg
Released Labenv 1.3 (diff)
8:19 AM labenv-1.3.tar.gz attached to net.sf.basedb.labenv by Nicklas Nordborg
Labenv 1.3
8:18 AM Changeset [3080] by Nicklas Nordborg
Tagging Labenv 1.3
8:18 AM Changeset [3079] by Nicklas Nordborg
Preparing to release Labenv 1.3
8:13 AM Ticket #706 (Update LabEnv to use BASE database capabilties instead of SQLite) closed by Nicklas Nordborg
fixed: Have tested this for some time now and it seems to be ok.
8:08 AM Changeset [3078] by Nicklas Nordborg
Preparing for future release example code 1.8
8:06 AM Milestone Example code v1.7 completed
For more information see [wiki:net.sf.basedb.examplecode Example code …
8:05 AM net.sf.basedb.examplecode edited by Nicklas Nordborg
Released example code 1.7 (diff)
8:04 AM Changeset [3077] by Nicklas Nordborg
Tagging example code 1.7
8:03 AM base-examples-1.7.tar.gz attached to net.sf.basedb.examplecode by Nicklas Nordborg
Example code 1.7
8:03 AM Changeset [3076] by Nicklas Nordborg
Preparing to release Example code 1.7

Jan 14, 2015:

4:44 PM Ticket #723 (Retraction wizard - Step 2: Follow up) updated by olle
Design specification for the retraction follow-up step: 1. JSP file …
2:37 PM Changeset [3075] by Nicklas Nordborg
Preparing for future release Skin collection 1.2
2:36 PM Milestone Skin-collection 1.1 completed
See Skin collection extension page
2:35 PM PluginDownload edited by Nicklas Nordborg
Released skin collection 1.1 (diff)
2:35 PM net.sf.basedb.skincollection edited by Nicklas Nordborg
Released skin collection 1.1 (diff)
2:33 PM skin-collection-1.1.tar.gz attached to net.sf.basedb.skincollection by Nicklas Nordborg
Skin collection 1.1
2:33 PM Changeset [3074] by Nicklas Nordborg
Tagging skin collection 1.1.
2:32 PM Changeset [3073] by Nicklas Nordborg
Preparing to release skin collection 1.1.

Jan 13, 2015:

3:43 PM Ticket #717 (Auto-confirmation service) updated by Nicklas Nordborg
(In [3072]) References #717: Auto-confirmation service Added a …
3:43 PM Changeset [3072] by Nicklas Nordborg
References #717: Auto-confirmation service Added a comment to …

Jan 12, 2015:

2:47 PM Ticket #717 (Auto-confirmation service) closed by Nicklas Nordborg
fixed
11:31 AM Ticket #726 (Improve performance of counter on index page) closed by Nicklas Nordborg
fixed
11:30 AM Ticket #702 (Use skin features in BASE 3.4) closed by Nicklas Nordborg
fixed
10:53 AM Ticket #717 (Auto-confirmation service) updated by Nicklas Nordborg
(In [3071]) References #717: Auto-confirmation service Store priority …
10:53 AM Changeset [3071] by Nicklas Nordborg
References #717: Auto-confirmation service Store priority and …
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