Timeline
Dec 10, 2013:
- 10:00 PM net.sf.basedb.reggie.notes214 edited by
- Clarifying role membership (diff)
- 9:47 PM Ticket #528 (Restrict access to some registation wizards) updated by
- (In [2169]) References #528: Restrict access to some registation …
- 9:47 PM Changeset [2169] by
- References #528: Restrict access to some registation wizards There …
- 3:28 PM Ticket #549 (Installation wizard should share biomaterial lists with WRITE permission) closed by
- fixed: (In [2168]) Fixes #549: Installation wizard should share biomaterial …
- 3:28 PM Changeset [2168] by
- Fixes #549: Installation wizard should share biomaterial lists with …
- 3:04 PM Ticket #549 (Installation wizard should share biomaterial lists with WRITE permission) created by
- Releated to #506, but it was not specified that unlike other items …
- 12:45 PM Ticket #533 (Add secondary analysis section to Reggie) updated by
-
Description changed
- 12:44 PM Ticket #548 (Register Demux and Merge as ended) created by
- Part of #533. This wizard is used to register that demuxing and …
- 10:59 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
-
Description changed
- 10:59 AM Ticket #547 (Start Demux and Merge) created by
- Part of #533. This wizard is started after confirming a successful …
- 9:50 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
- (In [2167]) Refs #541. Rank invariant normalization updated to store …
- 9:50 AM Changeset [2167] by
- Refs #541. Rank invariant normalization updated to store data in same …
- 9:45 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
-
Description changed
- 9:45 AM Ticket #546 (Confirm sequencing as completed) created by
- Part of #533. This is the first wizard in the "Secondary analysis …
- 9:32 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
-
Description changed
- 9:32 AM Ticket #545 (Register sequencing as ended) updated by
-
Description changed
- 9:31 AM Ticket #545 (Register sequencing as ended) created by
- Part of #533. This wizard should be the last wizard in the "Library …
- 9:20 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
-
Description, Summary changed
- 8:54 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
- Design note: * When data stored in logarithmic format are …
- 8:53 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
- Design note: * When data stored in logarithmic format are …
Dec 9, 2013:
- 4:08 PM Tickets #228,541 batch updated by
- (In [2166]) Refs #228. Refs #541. Average normalization updated to …
- 4:08 PM Changeset [2166] by
- Refs #228. Refs #541. Average normalization updated to untransform …
- 4:02 PM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
-
Design update for
AverageNormalization(mirrors update for … - 4:01 PM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
- (In [2165]) Refs #228. Refs #541. Quantile normalization updated to …
- 4:00 PM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
-
Design update for
AverageNormalization(mirrors update for … - 3:53 PM Ticket #544 (Re-design lab protocol and registration wizards for histology) updated by
-
Description changed
- 3:53 PM Ticket #544 (Re-design lab protocol and registration wizards for histology) created by
- The current version of the lab protocol has only a single date field …
- 12:24 PM Tickets #228,541 batch updated by
-
Design update for
QuantileNormalization: 1. Data stored in … - 12:23 PM Changeset [2165] by
- Refs #228. Refs #541. Quantile normalization updated to untransform …
- 11:51 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
-
Design update for
QuantileNormalization: 1. Data stored in … - 11:19 AM PluginDownload edited by
- Released Reggie 2.14-beta-2 (diff)
- 11:17 AM net.sf.basedb.reggie edited by
- Released Reggie 2.14-beta-2 (diff)
- 11:15 AM Changeset [2164] by
- Tagging Reggie 2.14-beta-2
- 11:14 AM Changeset [2163] by
- Preparing to release Reggie 2.14-beta-2
- 11:03 AM Ticket #543 (Different default values in 'Blood registration wizard' depending on site) closed by
- fixed: (In [2162]) Fixes #543: Different default values in 'Blood …
- 11:03 AM Changeset [2162] by
- Fixes #543: Different default values in 'Blood registration wizard' …
- 11:03 AM Ticket #543 (Different default values in 'Blood registration wizard' depending on site) updated by
-
Status, Milestone changed
- 10:11 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
- Problem discussion update: * BASE Ticket …
- 10:06 AM Ticket #528 (Restrict access to some registation wizards) updated by
- (In [2161]) References #528: Restrict access to some registation …
- 10:06 AM Changeset [2161] by
- References #528: Restrict access to some registation wizards Added …
Dec 6, 2013:
- 12:59 PM Ticket #542 (PAD should be a PatientCurator annotation) updated by
- (In [2160]) Fixes #542: PAD should be a PatientCurator annotation …
- 12:59 PM Changeset [2160] by
- Fixes #542: PAD should be a PatientCurator annotation Remove debug output.
- 10:01 AM Ticket #542 (PAD should be a PatientCurator annotation) closed by
- fixed: (In [2159]) Fixes #542: PAD should be a PatientCurator annotation The …
- 10:01 AM Changeset [2159] by
- Fixes #542: PAD should be a PatientCurator annotation The PAD values …
- 8:40 AM Ticket #528 (Restrict access to some registation wizards) updated by
- (In [2158]) References #528: Restrict access to some registation …
- 8:40 AM Changeset [2158] by
- References #528: Restrict access to some registation wizards Fixes an …
Dec 5, 2013:
- 3:27 PM Ticket #542 (PAD should be a PatientCurator annotation) updated by
-
Status changed
- 3:26 PM Ticket #528 (Restrict access to some registation wizards) closed by
- fixed
- 3:26 PM net.sf.basedb.reggie.notes214 created by
- Adding update notes for Reggie 2.14
- 3:14 PM net.sf.basedb.reggie edited by
- Adding link to update notes for Reggie 2.14 (diff)
- 2:44 PM Ticket #528 (Restrict access to some registation wizards) updated by
- (In [2157]) References #528: Restrict access to some registation …
- 2:44 PM Changeset [2157] by
- References #528: Restrict access to some registation wizards Defined …
- 1:34 PM Ticket #543 (Different default values in 'Blood registration wizard' depending on site) created by
- The information that we receive regarding blood sample from Uppsala is …
- 1:28 PM Ticket #542 (PAD should be a PatientCurator annotation) created by
- The data is somewhat sensitive since a person with access to other …
- 7:54 AM Changeset [2156] by
- Typo fixed in help text.
Dec 4, 2013:
- 4:56 PM Changeset [2155] by
- Minor improvements on help text
- 12:37 PM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
-
(In [2154]) Refs #228. Classes/files
AverageNormalization.javaand … - 12:37 PM Changeset [2154] by
-
Refs #228. Classes/files
AverageNormalization.javaand … - 10:46 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
- Problem discussion update: * BASE Ticket …
Dec 3, 2013:
- 2:32 PM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
- Problem discussion: * The desired default option for averaging …
- 2:05 PM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
-
Problem discussion:
* Class
QuantileNormalizationin … - 11:45 AM Ticket #528 (Restrict access to some registation wizards) updated by
-
Description changed
- 11:45 AM Ticket #528 (Restrict access to some registation wizards) updated by
-
Status, Description, Milestone changed
- 11:44 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
- Traceability note: * BASE Ticket [http://base.thep.lu.se/ticket/1120 …
- 11:40 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
- Traceability note: * BASE Ticket [http://base.thep.lu.se/ticket/1120 …
- 11:35 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
- Background discussion (Thanks to Nicklas Nordborg for detailed …
- 8:23 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
- Background discussion (Thanks to Nicklas Nordborg for detailed …
- 7:46 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by
-
Status changed
Ticket accepted. - 7:45 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
-
Status changed
Ticket accepted.
Dec 2, 2013:
Nov 29, 2013:
- 2:19 PM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by
-
Status, Owner changed
- 2:18 PM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) created by
- QuantileNormalizer always stores data non-logged irrespective what …
Nov 27, 2013:
- 8:53 AM Ticket #540 (Make sure Reggie works with BASE 3.3) created by
-
BASE 3.3 include a lot of
JavaScriptchanges which may affect the … - 8:45 AM Ticket #539 (Set "Disable log" flag on some annotation types) created by
- This is related to the new feature in BASE 3.3 about logging old …
Nov 26, 2013:
- 9:57 AM PluginDownload edited by
- Released Reggie 2.14-beta-1 (diff)
- 9:56 AM net.sf.basedb.reggie edited by
- Released Reggie 2.14-beta-1 (diff)
- 9:55 AM Changeset [2153] by
- Tagging Reggie 2.14-beta-1
- 9:54 AM Changeset [2152] by
- Preparing to release Reggie 2.14-beta-1
- 9:52 AM Ticket #538 (Count and display number of libraries with low and high concentration ...) closed by
- fixed: (In [2151]) Fixes #538: Count and display number of libraries with low …
- 9:52 AM Changeset [2151] by
- Fixes #538: Count and display number of libraries with low and high …
- 8:37 AM Ticket #537 (Allow 10µl as max volume in Create pooled libraries wizard) closed by
- fixed: (In [2150]) Fixes #537: Allow 10µl as max volume in Create pooled …
- 8:37 AM Changeset [2150] by
- Fixes #537: Allow 10µl as max volume in Create pooled libraries wizard
Nov 25, 2013:
- 10:49 AM Ticket #538 (Count and display number of libraries with low and high concentration ...) created by
- When the target volume in the 'Create pooled library' wizard changes …
- 10:11 AM Ticket #537 (Allow 10µl as max volume in Create pooled libraries wizard) created by
- The current limit is between 2 and 5µl. The 5µl limit was chosen to …
Nov 19, 2013:
- 1:18 PM Changeset [2149] by
- Removing Reggie/2.13-stable branch since it is now merged back to trunk.
- 1:16 PM Changeset [2148] by
- Merge changes from Reggie/2.13-stable development branch back to trunk.
- 1:11 PM Milestone Reggie v2.13 completed
- See Reggie extension page for more information.
- 1:11 PM PluginDownload edited by
- Released Reggie 2.13 (diff)
- 1:10 PM net.sf.basedb.reggie edited by
- Released Reggie 2.13 (diff)
- 1:08 PM Changeset [2147] by
- Tagging Reggie 2.13
- 1:08 PM Changeset [2146] by
- Preparing to release Reggie 2.13
- 10:46 AM Ticket #536 (Case summary display should remember the 'pageType' parameter) closed by
- fixed: (In [2145]) Fixes #536: Case summary display should remember the …
- 10:46 AM Changeset [2145] by
- Fixes #536: Case summary display should remember the 'pageType' parameter
- 10:34 AM Ticket #534 (Show case summary if given a personal number) closed by
- fixed: Ticket closed as the requested functionality has been added.
- 10:13 AM Ticket #534 (Show case summary if given a personal number) updated by
- (In [2144]) Refs #534. Case summary updated to use an input personal …
- 10:13 AM Changeset [2144] by
- Refs #534. Case summary updated to use an input personal number …
- 10:00 AM Ticket #534 (Show case summary if given a personal number) updated by
- Design implementation: The case summary is implemented by JSP script …
- 9:32 AM Ticket #536 (Case summary display should remember the 'pageType' parameter) created by
- The case summary can be opened from several different locations. …
- 9:29 AM Ticket #534 (Show case summary if given a personal number) updated by
- Design discussion. * Using a personal number to get a case summary …
- 9:16 AM Ticket #524 (Auto-select RNA wizard should be able to start from a specific date) closed by
- fixed: (In [2143]) Fixes #524: Auto-select RNA wizard should be able to start …
- 9:16 AM Changeset [2143] by
- Fixes #524: Auto-select RNA wizard should be able to start from a …
- 9:11 AM Ticket #535 (The Flagged RNA dialog doesn't round numeric values) closed by
- fixed: (In [2142]) Fixes #535: The Flagged RNA dialog doesn't round numeric values
- 9:11 AM Changeset [2142] by
- Fixes #535: The Flagged RNA dialog doesn't round numeric values
- 9:04 AM Ticket #535 (The Flagged RNA dialog doesn't round numeric values) created by
- This dialog is accessible from the 'Select RNA' wizard once an …
- 8:53 AM Ticket #534 (Show case summary if given a personal number) updated by
- Traceability note: * The case summary was introduced in Ticket #450 …
- 8:43 AM Ticket #534 (Show case summary if given a personal number) updated by
-
Status changed
Ticket accepted. - 8:42 AM Ticket #534 (Show case summary if given a personal number) updated by
-
Owner changed
Nov 18, 2013:
- 3:42 PM Ticket #524 (Auto-select RNA wizard should be able to start from a specific date) updated by
-
Status changed
- 2:36 PM Ticket #527 (Implement manual pooled library selection) updated by
- (In [2141]) References #527: Implement manual pooled library selection …
- 2:36 PM Changeset [2141] by
- References #527: Implement manual pooled library selection Selection …
- 11:46 AM Ticket #527 (Implement manual pooled library selection) updated by
- (In [2140]) References #527: Implement manual pooled library selection …
- 11:46 AM Changeset [2140] by
- References #527: Implement manual pooled library selection …
Nov 14, 2013:
- 10:05 AM Ticket #519 (Date fields should not allow 6-digit dates) closed by
- fixed: Ticket closed again after updating the two blood registration wizards …
- 10:02 AM Tickets #449,519 batch updated by
- (In [2139]) Refs #519. Refs #449. The two blood registration wizards …
- 10:02 AM Changeset [2139] by
- Refs #519. Refs #449. The two blood registration wizards updated to …
- 9:21 AM Ticket #449 (Add support for follow-up blood samples to the blood registration wizard) updated by
- (In [2138]) Refs #449. Wizard for registration of follow-up blood …
- 9:21 AM Changeset [2138] by
- Refs #449. Wizard for registration of follow-up blood samples updated …
Nov 13, 2013:
- 3:53 PM Ticket #527 (Implement manual pooled library selection) updated by
- (In [2137]) References #527: Implement manual pooled library selection …
- 3:53 PM Changeset [2137] by
- References #527: Implement manual pooled library selection This …
- 3:01 PM Ticket #519 (Date fields should not allow 6-digit dates) reopened by
- Reopening this ticket. The two blood registration wizards should allow …
- 2:41 PM Ticket #534 (Show case summary if given a personal number) created by
- The current case summary implementation requries a valid Scan-B case …
Nov 11, 2013:
- 3:25 PM Ticket #527 (Implement manual pooled library selection) updated by
-
Status changed
- 2:42 PM Ticket #533 (Add secondary analysis section to Reggie) created by
- This is the master ticket for adding secondary analysis registration …
- 2:35 PM Ticket #529 (Retrieve and store temperature and humidity measurements) updated by
-
Summary changed
- 2:34 PM Ticket #527 (Implement manual pooled library selection) updated by
-
Milestone changed
- 2:10 PM Changeset [2136] by
- Deleting obsolete bugfix branch.
- 2:08 PM Changeset [2135] by
- Delete branch since it has been merged to trunk in [2134].
- 2:07 PM Ticket #489 (Histology scoring wizard) updated by
- (In [2134]) References #489: Histology scoring wizard Merge …
- 2:07 PM Changeset [2134] by
- References #489: Histology scoring wizard Merge development branch …
- 1:58 PM Changeset [2133] by
- Preparing for future release Reggie 2.14.
- 1:57 PM Changeset [2132] by
- Creating branch for final Reggie 2.13 adjustments before release. …
- 1:43 PM Ticket #489 (Histology scoring wizard) updated by
- (In [2131]) References #489: Histology scoring wizard Added score …
- 1:43 PM Changeset [2131] by
- References #489: Histology scoring wizard Added score information to …
- 11:36 AM Ticket #489 (Histology scoring wizard) updated by
- (In [2130]) References #489: Histology scoring wizard Adding links …
- 11:36 AM Changeset [2130] by
- References #489: Histology scoring wizard Adding links from HE and PB …
- 11:27 AM Ticket #489 (Histology scoring wizard) updated by
- (In [2129]) References #489: Histology scoring wizard Do not ask …
- 11:27 AM Changeset [2129] by
- References #489: Histology scoring wizard Do not ask about 'unsaved …
- 10:49 AM Ticket #489 (Histology scoring wizard) updated by
- (In [2128]) References #489: Histology scoring wizard Several …
- 10:48 AM Changeset [2128] by
- References #489: Histology scoring wizard Several improvements to …
Note:
See TracTimeline
for information about the timeline view.
