Timeline



Mar 19, 2012:

1:53 PM Ticket #370 (Export run parameters to Caliper XML file) updated by Nicklas Nordborg
(In [1588]) References #370: Export run parameters to Caliper XML file …
1:53 PM Changeset [1588] by Nicklas Nordborg
References #370: Export run parameters to Caliper XML file Need the …
1:50 PM Changeset [1587] by Nicklas Nordborg
Creating branch for Reggie 2.5 development. Will be merged back to …
1:49 PM Changeset [1586] by Nicklas Nordborg
This branch should have been created in the branches folder…
1:49 PM Changeset [1585] by Nicklas Nordborg
Creating branch for Reggie 2.5 development. Will be merged back to …
1:47 PM Changeset [1584] by Nicklas Nordborg
No longer needed since Reggie 2.1 has been released.
1:40 PM Tickets #364,​365,​370,​366 batch updated by Nicklas Nordborg
(In [1583]) References #364, #365, #366, #370. Show a message and …
1:40 PM Changeset [1583] by Nicklas Nordborg
References #364, #365, #366, #370. Show a message and animated …
12:34 PM Ticket #373 (Register HE glass and histology child items) updated by Nicklas Nordborg
Milestone changed
12:34 PM Ticket #372 (Generate lab protocol for FFPE) updated by Nicklas Nordborg
Milestone changed
12:34 PM Ticket #371 (Wizard that move histology samples to paraffin blocks) updated by Nicklas Nordborg
Milestone, Status changed
11:39 AM Changeset [1582] by Nicklas Nordborg
Preparing for future release 'Web service examples 3.2'
11:38 AM Milestone Web services examples v3.1 completed
A web services client example for BASE. For more information see …
11:38 AM PluginDownload edited by Nicklas Nordborg
Released 'Web service examples 3.1' (diff)
11:37 AM net.sf.basedb.examples.webservices edited by Nicklas Nordborg
(diff)
11:37 AM net.sf.basedb.examples.webservices edited by Nicklas Nordborg
Released 'Web service examples 3.1' (diff)
11:35 AM example-webservices-3.1.tar.gz attached to net.sf.basedb.examples.webservices by Nicklas Nordborg
Web service examples 3.1
11:34 AM Changeset [1581] by Nicklas Nordborg
Tagging 'Web service examples 3.1'
11:34 AM Changeset [1580] by Nicklas Nordborg
Preparing for 'Web services example 3.1' release.
11:30 AM Changeset [1579] by Nicklas Nordborg
Preparing for future release 'MeV Launcher 1.10'
11:29 AM Milestone MeV Launcher v1.9 completed
For more information see the [wiki:net.sf.basedb.mev MEV Launcher …
11:28 AM PluginDownload edited by Nicklas Nordborg
Released 'MeV Launcher 1.9' (diff)
11:27 AM net.sf.basedb.mev edited by Nicklas Nordborg
Released 'MeV Launcher 1.9' (diff)
11:25 AM Changeset [1578] by Nicklas Nordborg
Tagging 'MeV Launcher v1.9'
11:24 AM Changeset [1577] by Nicklas Nordborg
Preparing 'MeV Launcher v1.9' release
11:22 AM Changeset [1576] by Nicklas Nordborg
Preparing for future release 'Example code 1.5'
11:20 AM Milestone Example code v1.4 completed
For more information see [wiki:net.sf.basedb.examplecode Example code …
11:20 AM PluginDownload edited by Nicklas Nordborg
Released 'Example code 1.4' (diff)
11:19 AM net.sf.basedb.examplecode edited by Nicklas Nordborg
Released 'Example code 1.4' (diff)
11:18 AM base-examples-1.4.tar.gz attached to net.sf.basedb.examplecode by Nicklas Nordborg
Example code 1.4
11:17 AM Changeset [1575] by Nicklas Nordborg
Tagging 'Example code 1.4'
11:16 AM Changeset [1574] by Nicklas Nordborg
Preparing 'Example code 1.4' release
9:17 AM Ticket #373 (Register HE glass and histology child items) created by Nicklas Nordborg
The paraffin blocks from #371 are sectioned and placed on glass …
9:00 AM Ticket #372 (Generate lab protocol for FFPE) created by Nicklas Nordborg
This is the second wizard that follows #371. In this wizard the user …
8:52 AM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1573]) References #364: Put RNA aliquots on bioplate to be used …
8:52 AM Changeset [1573] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …

Mar 16, 2012:

3:31 PM Ticket #371 (Wizard that move histology samples to paraffin blocks) created by Nicklas Nordborg
We need a couple of histology processing wizards. The current samples …
2:47 PM Ticket #369 (Update names for an existing patient) closed by Nicklas Nordborg
fixed: (In [1572]) Fixes #369: Update names for an existing patient
2:47 PM Changeset [1572] by Nicklas Nordborg
Fixes #369: Update names for an existing patient
2:24 PM Ticket #369 (Update names for an existing patient) updated by Nicklas Nordborg
Status changed
1:55 PM Changeset [1571] by Nicklas Nordborg
Removing unused import.
1:55 PM Tickets #365,​370 batch updated by Nicklas Nordborg
(In [1570]) References #365 and #370. Added checks in the installation …
1:55 PM Changeset [1570] by Nicklas Nordborg
References #365 and #370. Added checks in the installation wizard that …
1:08 PM Ticket #370 (Export run parameters to Caliper XML file) updated by Nicklas Nordborg
(In [1569]) References #370: Export run parameters to Caliper XML file …
1:08 PM Changeset [1569] by Nicklas Nordborg
References #370: Export run parameters to Caliper XML file Do not use …
11:12 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.4-beta2 (diff)
11:10 AM reggie-2.4-beta2.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.4-beta2
11:10 AM Changeset [1568] by Nicklas Nordborg
Tagging Reggie 2.4-beta2
11:09 AM Changeset [1567] by Nicklas Nordborg
Preparing Reggie 2.4-beta2 release.
11:08 AM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
(In [1566]) References #366: Import annotations and other information …
11:08 AM Changeset [1566] by Nicklas Nordborg
References #366: Import annotations and other information from Caliper …
10:25 AM Ticket #368 (Clearing the PAD field in the registration wizard should clear the PAD ...) closed by Nicklas Nordborg
fixed: (In [1565]) Fixes #368: Clearing the PAD field in the registration …
10:25 AM Changeset [1565] by Nicklas Nordborg
Fixes #368: Clearing the PAD field in the registration wizard should …
9:48 AM Ticket #368 (Clearing the PAD field in the registration wizard should clear the PAD ...) updated by Nicklas Nordborg
Status changed
9:44 AM Ticket #370 (Export run parameters to Caliper XML file) updated by Nicklas Nordborg
(In [1564]) References #370: Export run parameters to Caliper XML file …
9:44 AM Changeset [1564] by Nicklas Nordborg
References #370: Export run parameters to Caliper XML file Added …
9:42 AM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
(In [1563]) References #366: Import annotations and other information …
9:42 AM Changeset [1563] by Nicklas Nordborg
References #366: Import annotations and other information from Caliper …

Mar 15, 2012:

3:21 PM Ticket #370 (Export run parameters to Caliper XML file) updated by Nicklas Nordborg
(In [1562]) References #370: Export run parameters to Caliper XML file …
3:21 PM Changeset [1562] by Nicklas Nordborg
References #370: Export run parameters to Caliper XML file Added …
11:09 AM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
(In [1561]) References #366: Import annotations and other information …
11:09 AM Changeset [1561] by Nicklas Nordborg
References #366: Import annotations and other information from Caliper …
8:39 AM Ticket #370 (Export run parameters to Caliper XML file) updated by Nicklas Nordborg
Status changed
8:39 AM Ticket #370 (Export run parameters to Caliper XML file) created by Nicklas Nordborg
It seems like it should be possible to define all run parameters for …

Mar 14, 2012:

2:57 PM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1560]) References #364: Put RNA aliquots on bioplate to be used …
2:57 PM Changeset [1560] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …

Mar 12, 2012:

3:35 PM Ticket #369 (Update names for an existing patient) created by Nicklas Nordborg
The blood and personal registration forms have read-only fields for …
3:33 PM Ticket #368 (Clearing the PAD field in the registration wizard should clear the PAD ...) created by Nicklas Nordborg
The use case is that the PAD is actually missing from the form, but …
9:01 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.4-beta (diff)
8:59 AM reggie-2.4-beta.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.4-beta
8:59 AM Changeset [1559] by Nicklas Nordborg
Tagging Reggie 2.4-beta
8:58 AM Changeset [1558] by Nicklas Nordborg
Preparing Reggie 2.4-beta release.
8:57 AM Tickets #364,​365,​366 batch updated by Nicklas Nordborg
(In [1557]) References #364, #365 and #366. Added a short note about …
8:57 AM Changeset [1557] by Nicklas Nordborg
References #364, #365 and #366. Added a short note about the new …
8:52 AM Ticket #354 (Changes related to new GUI in BASE 3.1) closed by Nicklas Nordborg
fixed: Reggie seems to work ok in both BASE 3.0 and 3.1. There are some more …

Mar 8, 2012:

2:26 PM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
(In [1556]) References #366: Import annotations and other information …
2:26 PM Changeset [1556] by Nicklas Nordborg
References #366: Import annotations and other information from Caliper …
2:09 PM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
(In [1555]) References #366: Import annotations and other information …
2:09 PM Changeset [1555] by Nicklas Nordborg
References #366: Import annotations and other information from Caliper …
2:07 PM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1554]) References #364: Put RNA aliquots on bioplate to be used …
2:07 PM Changeset [1554] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …
1:02 PM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1553]) References #364: Put RNA aliquots on bioplate to be used …
1:02 PM Changeset [1553] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …

Mar 7, 2012:

2:37 PM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1552]) References #364: Put RNA aliquots on bioplate to be used …
2:37 PM Changeset [1552] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …

Mar 6, 2012:

3:21 PM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1551]) References #364: Put RNA aliquots on bioplate to be used …
3:21 PM Changeset [1551] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …
12:40 PM Ticket #365 (Export bioplate information to a file that can be used by the Caliper ...) updated by Nicklas Nordborg
(In [1550]) References #365: Export bioplate information to a file …
12:40 PM Changeset [1550] by Nicklas Nordborg
References #365: Export bioplate information to a file that can be …
12:37 PM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1549]) References #364: Put RNA aliquots on bioplate to be used …
12:37 PM Changeset [1549] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …
10:56 AM Ticket #365 (Export bioplate information to a file that can be used by the Caliper ...) updated by Nicklas Nordborg
(In [1548]) References #365: Export bioplate information to a file …
10:56 AM Changeset [1548] by Nicklas Nordborg
References #365: Export bioplate information to a file that can be …
9:53 AM Ticket #367 (Incorrect mapping of prefix index to site name) closed by Nicklas Nordborg
fixed: (In [1547]) Fixes #367: Incorrect mapping of prefix index to site name …
9:53 AM Changeset [1547] by Nicklas Nordborg
Fixes #367: Incorrect mapping of prefix index to site name And also …

Mar 5, 2012:

3:30 PM Ticket #367 (Incorrect mapping of prefix index to site name) updated by Nicklas Nordborg
Description changed
3:30 PM Ticket #367 (Incorrect mapping of prefix index to site name) created by Nicklas Nordborg
The correct mapping should be: […]

Mar 2, 2012:

1:19 PM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
(In [1546]) References #366: Import annotations and other information …
1:19 PM Changeset [1546] by Nicklas Nordborg
References #366: Import annotations and other information from Caliper …

Mar 1, 2012:

10:24 AM Ticket #365 (Export bioplate information to a file that can be used by the Caliper ...) updated by Nicklas Nordborg
(In [1545]) References #365: Export bioplate information to a file …
10:24 AM Changeset [1545] by Nicklas Nordborg
References #365: Export bioplate information to a file that can be …
9:24 AM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
Description changed
9:22 AM Ticket #366 (Import annotations and other information from Caliper output) updated by Nicklas Nordborg
Status changed

Feb 29, 2012:

2:36 PM Ticket #365 (Export bioplate information to a file that can be used by the Caliper ...) updated by Nicklas Nordborg
(In [1544]) References #365: Export bioplate information to a file …
2:36 PM Changeset [1544] by Nicklas Nordborg
References #365: Export bioplate information to a file that can be …
8:31 AM Ticket #365 (Export bioplate information to a file that can be used by the Caliper ...) updated by Nicklas Nordborg
Status changed

Feb 28, 2012:

2:43 PM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
(In [1543]) References #364: Put RNA aliquots on bioplate to be used …
2:43 PM Changeset [1543] by Nicklas Nordborg
References #364: Put RNA aliquots on bioplate to be used by the …

Feb 24, 2012:

11:04 AM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) updated by Nicklas Nordborg
Status changed

Feb 23, 2012:

2:43 PM Ticket #365 (Export bioplate information to a file that can be used by the Caliper ...) updated by Nicklas Nordborg
It seems like the file format is a simple csv without headers. Each …
2:30 PM Ticket #354 (Changes related to new GUI in BASE 3.1) updated by Nicklas Nordborg
Status changed
9:50 AM Ticket #366 (Import annotations and other information from Caliper output) created by Nicklas Nordborg
This is related to #365 and #364. When the Caliper has finished we …
9:47 AM Ticket #365 (Export bioplate information to a file that can be used by the Caliper ...) created by Nicklas Nordborg
This is related to #364. When the plate is full it is going to be …
9:45 AM Ticket #364 (Put RNA aliquots on bioplate to be used by the Caliper machine) created by Nicklas Nordborg
The Caliper machine takes 8x12 plates for batch processing 96 extracts …

Feb 22, 2012:

11:22 AM Ticket #363 (Add 'install' target to ant build script) closed by Nicklas Nordborg
fixed: (In [1542]) Fixes #363: Add 'install' target to ant build script
11:22 AM Changeset [1542] by Nicklas Nordborg
Fixes #363: Add 'install' target to ant build script
11:21 AM Ticket #363 (Add 'install' target to ant build script) created by Nicklas Nordborg
9:32 AM Ticket #360 (Changes related to new GUI in BASE 3.1) closed by Nicklas Nordborg
fixed: (In [1541]) Fixes #360: Changes related to new GUI in BASE 3.1
9:32 AM Changeset [1541] by Nicklas Nordborg
Fixes #360: Changes related to new GUI in BASE 3.1
9:32 AM Ticket #361 (MeV TDMS exporter should only include reporter fields that are present ...) closed by Nicklas Nordborg
fixed: (In [1540]) Fixes #361: MeV TDMS exporter should only include reporter …
9:31 AM Changeset [1540] by Nicklas Nordborg
Fixes #361: MeV TDMS exporter should only include reporter fields that …
9:15 AM Ticket #362 (Add 'install' target to ant build script) closed by Nicklas Nordborg
fixed: (In [1539]) Fixes #362: Add 'install' target to ant build script
9:15 AM Changeset [1539] by Nicklas Nordborg
Fixes #362: Add 'install' target to ant build script
9:13 AM Ticket #362 (Add 'install' target to ant build script) updated by Nicklas Nordborg
Status changed
9:13 AM Ticket #362 (Add 'install' target to ant build script) created by Nicklas Nordborg
This will make it easier for developers in a windows environment that …

Feb 21, 2012:

2:30 PM Ticket #361 (MeV TDMS exporter should only include reporter fields that are present ...) updated by Nicklas Nordborg
Status changed
2:30 PM Ticket #361 (MeV TDMS exporter should only include reporter fields that are present ...) created by Nicklas Nordborg
This means that if the experiment is using cloned reporter annotations …
1:49 PM Ticket #360 (Changes related to new GUI in BASE 3.1) updated by Nicklas Nordborg
Status changed
1:49 PM Ticket #354 (Changes related to new GUI in BASE 3.1) updated by Nicklas Nordborg
(In [1538]) References #354: Changes related to new GUI in BASE 3.1 …
1:49 PM Changeset [1538] by Nicklas Nordborg
References #354: Changes related to new GUI in BASE 3.1 This should …
1:44 PM Ticket #360 (Changes related to new GUI in BASE 3.1) created by Nicklas Nordborg
BASE 3.1 has a new and updated GUI. See …
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