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4:19 PM Ticket #204 (Add option to include all available negative controls in detection ...) updated by Jari Häkkinen: Description changed
4:18 PM Ticket #245 (net.sf.basedb.illumina: Detection P-value fails if there is no ...) created by Jari Häkkinen: The plug-in returns with Status: Error: -1 The plug-in should return …
9:56 AM Ticket #242 (Implement "Save to BASE" function in the MeV gui) updated by Nicklas Nordborg: I just found out one potential issue that limits the usability of this …

9:00 AM Ticket #242 (Implement "Save to BASE" function in the MeV gui) updated by Nicklas Nordborg: Status changed
8:57 AM Changeset [1161] by Nicklas Nordborg: Fixes #241: Add MeV Analysis file as a file type for bioassay sets …
8:57 AM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) closed by Nicklas Nordborg: fixed: (In [1161]) Fixes #241: Add MeV Analysis file as a file type for …

2:37 PM Ticket #243 (Create a sample MeV analysis file for testing purposes) closed by Nicklas Nordborg: fixed: The test files (one tdms file and one analysis file) can be found in …
2:28 PM Changeset [1160] by Nicklas Nordborg: References #241: Add MeV Analysis file as a file type for bioassay …
2:28 PM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) updated by Nicklas Nordborg: (In [1160]) References #241: Add MeV Analysis file as a file type for …
1:22 PM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) updated by Nicklas Nordborg: (In [1159]) References #241: Add MeV Analysis file as a file type for …
1:22 PM Changeset [1159] by Nicklas Nordborg: References #241: Add MeV Analysis file as a file type for bioassay …
12:51 PM Changeset [1158] by Nicklas Nordborg: Checking in the .classpath file for Eclipse since it is so boring to …
12:46 PM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) updated by Nicklas Nordborg: (In [1157]) References #241: Add MeV Analysis file as a file type for …
12:46 PM Changeset [1157] by Nicklas Nordborg: References #241: Add MeV Analysis file as a file type for bioassay …

1:44 PM Changeset [1156] by Nicklas Nordborg: References #241: Add MeV Analysis file as a file type for bioassay …
1:44 PM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) updated by Nicklas Nordborg: (In [1156]) References #241: Add MeV Analysis file as a file type for …

10:51 AM Ticket #209 (Export of data to data repositories such as GEO and ArrayExpress) updated by Jari Häkkinen: A GEO export should probably be a two step process. One step to export …
10:48 AM Ticket #244 (Create a SAM plug-in) created by Jari Häkkinen: SAM is available in MeV but it would be nice to have it as an …

9:53 AM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) updated by Nicklas Nordborg: Bad news. It seem like MeV doesn't support opening analysis files from …
9:27 AM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) updated by Nicklas Nordborg: Status changed
9:08 AM Ticket #125 (MeV ... files are now supported (by the BASEcore) in the BASE analysis tree) closed by Nicklas Nordborg: duplicate: Replaced by #241, #242 and #243.
9:07 AM Ticket #243 (Create a sample MeV analysis file for testing purposes) created by Nicklas Nordborg: This is needed by #241 and #242. This ticket replaces #125.
9:04 AM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) updated by Nicklas Nordborg: Description changed
9:03 AM Ticket #242 (Implement "Save to BASE" function in the MeV gui) created by Nicklas Nordborg: For background info see #241. We should investigate and try to …
9:00 AM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) created by Nicklas Nordborg: The scenario is this. A users uses the MeV extension to export and …

1:03 PM Changeset [1155] by Nicklas Nordborg: Changes for future release 1.5
1:02 PM Milestone MeV Launcher v1.4 completed: Update to MeV 4.4. For more information see the …
1:00 PM net.sf.basedb.mev edited by Nicklas Nordborg: Releasing: MeV Launcher 1.4 (diff)
12:56 PM mev-launcher-1.4.tar.gz attached to net.sf.basedb.mev by Nicklas Nordborg: MeV Launcher 1.4
12:55 PM Changeset [1154] by Nicklas Nordborg: Tagging MeV launcher 1.4
12:54 PM Changeset [1153] by Nicklas Nordborg: Preparing release of "MeV launcher 1.4"
11:48 AM Changeset [1152] by Nicklas Nordborg: Preparing for future release 1.3
11:47 AM Milestone Extension examples v1.2 completed: For more information see [wiki:net.sf.basedb.examples.extensions …
11:45 AM PluginDownload edited by Nicklas Nordborg: (diff)
11:45 AM net.sf.basedb.examplecode edited by Nicklas Nordborg: Releasing: Extension examples 1.2 (diff)
11:42 AM extension-examples-1.2.tar.gz attached to net.sf.basedb.examplecode by Nicklas Nordborg: Example extensions v1.2
11:41 AM Changeset [1151] by Nicklas Nordborg: Tagging release 1.2
11:40 AM Changeset [1150] by Nicklas Nordborg: Preparing release of "Extension examples 1.2"

11:22 AM net.sf.basedb.examplecode edited by Nicklas Nordborg: Adding links to changelog for each release (diff)

2:33 PM Ticket #240 (Bead summary importer should have an option to fail if the number of ...) closed by Nicklas Nordborg: fixed: (In [1149]) Fixes #240: Bead summary importer should have an option to …
2:33 PM Changeset [1149] by Nicklas Nordborg: Fixes #240: Bead summary importer should have an option to fail if the …
11:35 AM Ticket #240 (Bead summary importer should have an option to fail if the number of ...) updated by Nicklas Nordborg: Status changed

8:44 AM Ticket #240 (Bead summary importer should have an option to fail if the number of ...) created by Nicklas Nordborg: The current implementation only allows a user to fail on the first …

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