Timeline



Feb 17, 2009:

8:56 AM se.lu.onk.IlluminaSNPNormalization edited by markus
(diff)

Feb 16, 2009:

10:21 PM Changeset [964] by Jari Häkkinen
Added support to add qQN source to the normalizer package.
9:33 PM Changeset [963] by Jari Häkkinen
Improved configure.ac and added option to disable check on required libs.
9:19 PM Changeset [962] by Jari Häkkinen
Added missing include statement.

Feb 13, 2009:

12:30 AM Changeset [961] by Jari Häkkinen
Refs #118 and #161. PluginUtilities? download support. Added distclean …

Feb 12, 2009:

3:44 PM net.sf.basedb.normalizers edited by Peter Johansson
corrected query syntax -- see wiki:TracQuery#UsingTracLinks details (diff)
2:59 PM net.sf.basedb.normalizers edited by Jari Häkkinen
Fixed order in ticket query (diff)
2:46 PM Changeset [960] by Jari Häkkinen
Refs #118. Changes suggested by the yat developer team.

Feb 11, 2009:

8:51 AM Changeset [959] by Martin Svensson
Fixes #164 Improve documentation on how to upgrade the illumina …
8:51 AM Ticket #164 (Improve documentation on how to upgrade the illumina plug-in package) closed by Martin Svensson
fixed: (In [959]) Fixes #164 Improve documentation on how to upgrade the …

Feb 10, 2009:

10:53 AM Changeset [958] by Martin Svensson
Fixes #177 Add information about how to upgrade the normalization package.
10:53 AM Ticket #177 (Add information about how to upgrade the normalization package.) closed by Martin Svensson
fixed: (In [958]) Fixes #177 Add information about how to upgrade the …

Feb 9, 2009:

8:29 AM Changeset [957] by Nicklas Nordborg
Fixes #175: Update the ant script to include contrib directory when …
8:29 AM Ticket #175 (Update the ant script to include contrib directory when creating package.) closed by Nicklas Nordborg
fixed: (In [957]) Fixes #175: Update the ant script to include contrib …

Feb 8, 2009:

10:36 PM Changeset [956] by Jari Häkkinen
Removed stray character in configure.ac
10:18 PM Changeset [955] by Jari Häkkinen
Refs #118. Changes suggested by the yat developer team.
10:06 PM Changeset [954] by Jari Häkkinen
Refs #118. Changes suggested by the yat developer team.
10:02 PM Changeset [953] by Jari Häkkinen
Refs #118. Changes suggested by the yat developer team.

Feb 6, 2009:

11:58 AM se.lu.onk.BAFsegmentation edited by markus
(diff)
11:55 AM se.lu.onk.BAFsegmentation edited by markus
(diff)
10:47 AM Changeset [952] by Jari Häkkinen
Addresses #118. Added underlying C++ binary for the qQuantile.
10:10 AM Ticket #177 (Add information about how to upgrade the normalization package.) created by Jari Häkkinen
Explicitly state how an upgrade of the package is performed. If it is …

Feb 5, 2009:

4:40 PM Changeset [951] by Martin Svensson
References #119 Added plugin-class. The plugin doesn't really do …

Feb 4, 2009:

4:35 PM Changeset [950] by Martin Svensson
References #119 Moved some method from the QuantileNormalization?

Jan 30, 2009:

9:25 AM Changeset [949] by Martin Svensson
Fixes #176 Create release document
9:25 AM Ticket #176 (Create release document) closed by Martin Svensson
fixed: (In [949]) Fixes #176 Create release document
9:00 AM Ticket #168 (MD5 sum should be automatically generated for a package) closed by Martin Svensson
fixed: (In [948]) Fixes #168 MD5 sum should be automatically generated for a …
9:00 AM Changeset [948] by Martin Svensson
Fixes #168 MD5 sum should be automatically generated for a package

Jan 29, 2009:

4:32 PM Ticket #166 ((net.sf.basedb.normalizers) Automatic progression of version to source ...) closed by Martin Svensson
fixed: (In [947]) Fixes #166 (net.sf.basedb.normalizers) Automatic …
4:32 PM Changeset [947] by Martin Svensson
Fixes #166 (net.sf.basedb.normalizers) Automatic progression of …
4:25 PM Ticket #176 (Create release document) created by Martin Svensson
A document to describe the release procedure step-by-step. For …

Jan 28, 2009:

2:17 PM Changeset [946] by Martin Svensson
References #161 Set external jar-files to be ignored
2:16 PM Changeset [945] by Martin Svensson
Fixes #161 (net.sf.basedb.normalizers) Automatic download of BASE API
2:16 PM Ticket #161 ((net.sf.basedb.normalizers) Automatic download of BASE API) closed by Martin Svensson
fixed: (In [945]) Fixes #161 (net.sf.basedb.normalizers) Automatic download …
1:24 PM net.sf.basedb.illumina edited by Martin Svensson
References #174 (diff)
1:19 PM Changeset [944] by Martin Svensson
References #173 The 'float to integer' conversion has been removed but …
11:53 AM net.sf.basedb.illumina edited by Martin Svensson
Locked beadstudio2ibs.pl link to revision 940 due to some changes in … (diff)
11:41 AM WikiStart edited by Martin Svensson
Updated link to base2 core plug-ins (diff)
11:10 AM Changeset [943] by Martin Svensson
Fixes #171 IBS raw data importer should be able to handle floats in …
11:10 AM Ticket #171 (IBS raw data importer should be able to handle floats in some columns) closed by Martin Svensson
fixed: (In [943]) Fixes #171 IBS raw data importer should be able to handle …

Jan 27, 2009:

4:21 PM Changeset [942] by Martin Svensson
Fixes #170 Result dialouge after batch importing several raw bioassays …
4:21 PM Ticket #170 (Result dialouge after batch importing several raw bioassays is ...) closed by Martin Svensson
fixed: (In [942]) Fixes #170 Result dialouge after batch importing several …
2:58 PM Changeset [941] by Martin Svensson
References #174 license text should referr to the Illumina plug-in package
2:37 PM Ticket #174 (Change license to GPL 3 for the illumina package?) closed by Martin Svensson
fixed: (In [940]) Fixes #174 Change license to GPL 3 for the illumina package
2:37 PM Changeset [940] by Martin Svensson
Fixes #174 Change license to GPL 3 for the illumina package

Jan 21, 2009:

8:25 AM Changeset [939] by Nicklas Nordborg
References #127: Update to final release of Apache Mina FTP server …

Jan 20, 2009:

1:51 PM Ticket #175 (Update the ant script to include contrib directory when creating package.) created by Jari Häkkinen
Also add a pointer in the README to the contrib directory and explain …
1:49 PM Ticket #174 (Change license to GPL 3 for the illumina package?) created by Jari Häkkinen
At 1.3 release?
1:48 PM Ticket #173 (Remove the float to integer conversions in beadstudio2ibs.pl when ...) created by Jari Häkkinen
related to ticket:171
1:47 PM net.sf.basedb.illumina edited by Jari Häkkinen
Added info on beadstudio2ibs (diff)
1:38 PM Changeset [938] by Jari Häkkinen
Added svn property.
1:36 PM Changeset [937] by Jari Häkkinen
Added beadstudio data to IBS data converter.

Jan 19, 2009:

4:16 PM Ticket #172 (Why is there a check for LIBTOOL in configure.ac in the WeNNI project?) created by Jari Häkkinen
Remove the check if not needed.
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