Timeline



Jan 15, 2009:

5:33 PM se.lu.onk.IlluminaSNPNormalization edited by markus
(diff)
11:11 AM IlluminaFloat.data attached to Ticket #171 by Jari Häkkinen
11:10 AM Ticket #171 (IBS raw data importer should be able to handle floats in some columns) created by Jari Häkkinen
There are four columns in IBS files: Illumicode,N,Mean GRN,Dev GRN …
10:58 AM scrrendump.png attached to Ticket #170 by Jari Häkkinen
10:58 AM Ticket #170 (Result dialouge after batch importing several raw bioassays is ...) created by Jari Häkkinen
The plugin reports the number of files imported but it should say …

Jan 8, 2009:

4:18 PM Changeset [936] by Peter Johansson
add --force option in autoreconf call in bootstrap. The reason this is …

Jan 7, 2009:

9:50 AM Ticket #169 (Running two "New root bioassay set" jobs at the same time makes the ...) created by Nicklas Nordborg
Moved from ​http://base.thep.lu.se/ticket/1224. This is at least true …

Dec 21, 2008:

5:01 PM Changeset [935] by Jari Häkkinen
Removing braches.
4:59 PM se.lu.thep.affymetrix edited by Jari Häkkinen
Added link to repository. (diff)

Dec 18, 2008:

5:05 PM se.lu.onk.CGHDataDumper edited by Jari Häkkinen
(diff)
5:03 PM PluginDownload edited by Jari Häkkinen
(diff)
4:07 PM PluginDownload edited by Jari Häkkinen
Update normalization package information (diff)
12:57 PM Ticket #120 (Create a normalization plug-in package.) closed by Jari Häkkinen
fixed: Released working plugins in 1.0. The remaining tickets moved to 1.1
12:56 PM Milestone Normalization package v1.0 completed
For more information see the [wiki:net.sf.basedb.normalizers …
12:55 PM net.sf.basedb.normalizers edited by Jari Häkkinen
(diff)
12:54 PM net.sf.basedb.normalizers edited by Jari Häkkinen
Added raw download tag to package link. (diff)
12:53 PM normalization-plugins-1.0.tar.gz.MD5 attached to net.sf.basedb.normalizers by Jari Häkkinen
12:53 PM normalization-plugins-1.0.tar.gz attached to net.sf.basedb.normalizers by Jari Häkkinen
12:52 PM net.sf.basedb.normalizers edited by Jari Häkkinen
Preparing 1.0 release of net.sf.basedb.normalizers package. (diff)
12:48 PM Ticket #168 (MD5 sum should be automatically generated for a package) created by Jari Häkkinen
12:44 PM Changeset [934] by Jari Häkkinen
Tagging version 1.0 of the net.sf.basedb.normalizers.
12:41 PM Changeset [933] by Jari Häkkinen
Corrected spelling
12:40 PM Ticket #120 (Create a normalization plug-in package.) updated by Jari Häkkinen
(In [932]) Addresses #120.
12:40 PM Changeset [932] by Jari Häkkinen
Addresses #120.
12:30 PM Changeset [931] by Jari Häkkinen
Addresses #120. Preparing 1.0 release.
12:30 PM Ticket #120 (Create a normalization plug-in package.) updated by Jari Häkkinen
(In [931]) Addresses #120. Preparing 1.0 release.
12:30 PM Ticket #120 (Create a normalization plug-in package.) updated by Jari Häkkinen
Status, Owner changed
12:29 PM net.sf.basedb.normalizers edited by Jari Häkkinen
Preparing 1.0 release of net.sf.basedb.normalizers package. (diff)
12:18 PM Changeset [930] by Jari Häkkinen
Typo
12:15 PM Changeset [929] by Jari Häkkinen
Removing CubicSplineNormalization stub.
12:12 PM Changeset [928] by Jari Häkkinen
Fixes #167. Now using geometric mean
12:12 PM Ticket #167 ((net.sf.basedb.normalizers) Average normalizer should use geometric mean) closed by Jari Häkkinen
fixed: (In [928]) Fixes #167. Now using geometric mean
12:12 PM Ticket #118 (Create qQuantile normalizer (aka cubic-spline normalizer)) updated by Jari Häkkinen
Summary changed
12:11 PM Changeset [927] by Jari Häkkinen
Refs #165.
12:11 PM Ticket #165 (Create quantile normalizer) updated by Jari Häkkinen
(In [927]) Refs #165.
11:14 AM Ticket #167 ((net.sf.basedb.normalizers) Average normalizer should use geometric mean) updated by Jari Häkkinen
Status, Owner changed
11:13 AM Ticket #167 ((net.sf.basedb.normalizers) Average normalizer should use geometric mean) created by Jari Häkkinen
The current version uses the arithmetic mean.
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