Timeline



Mar 21, 2008:

3:03 PM Changeset [640] by mbayer
test file commit -- having trouble committing into the new repo
2:55 PM Changeset [639] by mbayer
simplified the workflow and inputs

Mar 20, 2008:

8:27 AM Ticket #103 (Create example extensions) updated by Nicklas Nordborg
(In [638]) References #103: Create example extensions Made build …
8:27 AM Changeset [638] by Nicklas Nordborg
References #103: Create example extensions Made build process simpler.

Mar 19, 2008:

3:01 PM Changeset [637] by Nicklas Nordborg
References #103: Create example extensions ant package now also …
3:01 PM Ticket #103 (Create example extensions) updated by Nicklas Nordborg
(In [637]) References #103: Create example extensions ant package now …
2:51 PM net.sf.basedb.examplecode edited by Nicklas Nordborg
(diff)
2:50 PM Ticket #103 (Create example extensions) updated by Nicklas Nordborg
(In [636]) References #103: Create example extensions First checkin …
2:50 PM Changeset [636] by Nicklas Nordborg
References #103: Create example extensions First checkin of example …
2:30 PM Ticket #103 (Create example extensions) updated by Nicklas Nordborg
Description changed
2:28 PM Ticket #103 (Create example extensions) updated by Nicklas Nordborg
Status changed
2:28 PM Ticket #103 (Create example extensions) created by Nicklas Nordborg
The idea is to create some simple extensions that can be used by …
2:25 PM net.sf.basedb.examplecode created by Nicklas Nordborg
Created this page
11:14 AM Changeset [635] by Nicklas Nordborg
Added directory structure for extension examples

Mar 14, 2008:

5:07 PM net.sf.basedb.illumina edited by Peter Johansson
typo (diff)
12:50 PM RobotsTxt edited by Nicklas Nordborg
Disallow /changeset for robots (diff)
12:41 PM RobotsTxt edited by Nicklas Nordborg
Disallow robots (diff)
8:21 AM net.sf.basedb.illumina edited by Nicklas Nordborg
Change documentation links to point to the 1.0 release (diff)
8:18 AM Changeset [634] by Nicklas Nordborg
Added release procedure instructions.
7:48 AM SubversionCheckout edited by Nicklas Nordborg
Fixed incorrect subversion url:s (diff)

Mar 13, 2008:

1:59 PM Milestone Illumina package v1.0 completed
See Illumina plug-ins package for BASE
1:58 PM PluginDownload edited by Nicklas Nordborg
Removed link to webservices example since it is very outdated (diff)
1:57 PM PluginDownload edited by Nicklas Nordborg
Releasing version 1.0 (diff)
1:54 PM net.sf.basedb.illumina edited by Nicklas Nordborg
Releasing version 1.0 (diff)
1:44 PM illumina-plugins-1.0.tar.gz attached to net.sf.basedb.illumina by Nicklas Nordborg
Releasing version 1.0
1:36 PM Changeset [633] by Nicklas Nordborg
Changes for future release 1.1
1:36 PM Changeset [632] by Nicklas Nordborg
Tagging release 1.0
1:34 PM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by Nicklas Nordborg
(In [631]) References #91: Import Illumina Bead Summary(IBS) files as …
1:34 PM Changeset [631] by Nicklas Nordborg
References #91: Import Illumina Bead Summary(IBS) files as raw data …
1:33 PM Changeset [630] by Nicklas Nordborg
References #94: Import reporter annotations from bgx files Added …
1:33 PM Ticket #94 (Import reporter annotations from bgx files) updated by Nicklas Nordborg
(In [630]) References #94: Import reporter annotations from bgx files …
12:05 PM net.sf.basedb.illumina edited by Nicklas Nordborg
(diff)
12:01 PM Ticket #89 (Installation program and documentation) closed by Nicklas Nordborg
fixed
12:01 PM Ticket #102 (Intensity calculator for Illumina SNP data) closed by Nicklas Nordborg
fixed
12:01 PM Changeset [629] by Nicklas Nordborg
References #89: Installation program and documentation Preparing for …
12:01 PM Ticket #89 (Installation program and documentation) updated by Nicklas Nordborg
(In [629]) References #89: Installation program and documentation …
9:58 AM Changeset [628] by Nicklas Nordborg
References #89: Installation program and documentation Made the SNP …
9:58 AM Ticket #89 (Installation program and documentation) updated by Nicklas Nordborg
(In [628]) References #89: Installation program and documentation …
9:57 AM Ticket #89 (Installation program and documentation) updated by Nicklas Nordborg
(In [627]) References #89: Installation program and documentation …
9:57 AM Changeset [627] by Nicklas Nordborg
References #89: Installation program and documentation Added readme …
9:55 AM net.sf.basedb.illumina edited by Nicklas Nordborg
Update information with SNP plug-ins (diff)

Mar 12, 2008:

9:24 AM Tickets #89,​100 batch updated by Nicklas Nordborg
(In [626]) References #89, #100: Added formulas for better SNP gui. …
9:24 AM Changeset [626] by Nicklas Nordborg
References #89, #100: Added formulas for better SNP gui. Gtype = …

Mar 11, 2008:

2:36 PM Ticket #102 (Intensity calculator for Illumina SNP data) updated by Nicklas Nordborg
(In [625]) References #102: Intensity calculator for Illumina SNP data …
2:36 PM Changeset [625] by Nicklas Nordborg
References #102: Intensity calculator for Illumina SNP data Added …

Mar 10, 2008:

2:46 PM Changeset [624] by Nicklas Nordborg
References #102: Intensity calculator for Illumina SNP data The main …
2:46 PM Ticket #102 (Intensity calculator for Illumina SNP data) updated by Nicklas Nordborg
(In [624]) References #102: Intensity calculator for Illumina SNP data …
9:20 AM Changeset [623] by Martin Svensson
Fixes #100. Add Illumina SNP platform to the installation program
9:20 AM Ticket #100 (Add Illumina SNP platform to the installation program) closed by Martin Svensson
fixed: (In [623]) Fixes #100. Add Illumina SNP platform to the installation …
8:51 AM Changeset [622] by Martin Svensson
References #101comment:9 - fixes the listed items in the comment.
8:51 AM Ticket #101 (Import plug-in for SNP raw data) updated by Martin Svensson
(In [622]) References #101comment:9 - fixes the listed items in the …
8:43 AM Changeset [621] by Nicklas Nordborg
Removed unused imports
8:15 AM Ticket #101 (Import plug-in for SNP raw data) updated by Nicklas Nordborg
I think the import should set the following properties on the split …
7:57 AM Ticket #94 (Import reporter annotations from bgx files) closed by Nicklas Nordborg
fixed
7:57 AM Ticket #102 (Intensity calculator for Illumina SNP data) updated by Nicklas Nordborg
Status, Owner changed

Mar 7, 2008:

8:40 AM Ticket #93 (Illumina SNP validator and meta-data extractor) closed by Martin Svensson
fixed: (In [620]) Fixes #93 Added some more javadoc and improved the code …
8:40 AM Changeset [620] by Martin Svensson
Fixes #93 Added some more javadoc and improved the code format in a …

Mar 6, 2008:

4:44 PM Ticket #101 (Import plug-in for SNP raw data) closed by Martin Svensson
fixed: (In [619]) Fixes #101. The plug-in tested both from raw …
4:44 PM Changeset [619] by Martin Svensson
Fixes #101. The plug-in tested both from raw bioassay-listview and …

Mar 5, 2008:

4:09 PM Changeset [618] by Martin Svensson
References #101. The import is now done. Code needs to be cleaned up …
4:09 PM Ticket #101 (Import plug-in for SNP raw data) updated by Martin Svensson
(In [618]) References #101. The import is now done. Code needs to be …

Mar 3, 2008:

4:50 PM Ticket #101 (Import plug-in for SNP raw data) updated by Martin Svensson
(In [617]) References #101. Creating RawBioAssays and split up files. …
4:50 PM Changeset [617] by Martin Svensson
References #101. Creating RawBioAssays and split up files. The data …

Feb 29, 2008:

4:24 PM Ticket #99 (The tagging system of the repository should be changed) updated by Nicklas Nordborg
Component changed
4:23 PM Ticket #99 (The tagging system of the repository should be changed) closed by Nicklas Nordborg
fixed
3:45 PM se.lu.thep.affymetrix edited by Peter Johansson
Made links to attachment relative. (diff)
2:01 PM se.lu.thep.affymetrix edited by Peter Johansson
svn repo has moved with new file structure (diff)
12:18 PM DeveloperPage edited by Nicklas Nordborg
New instructions regarding /tags, /trunk and /branches (diff)
12:12 PM net.sf.basedb.illumina edited by Nicklas Nordborg
New location for the subversion repository (diff)
11:37 AM Changeset [616] by Nicklas Nordborg
Deleting old locations (again)
11:35 AM Changeset [615] by Nicklas Nordborg
Deleting old branches (fourth try)
11:23 AM Changeset [614]
11:20 AM Changeset [613]
Deleting old branches (second try)
11:16 AM Changeset [612]
Deleting old locations
11:13 AM Changeset [611] by Nicklas Nordborg
Moving tab2mageimporter branch to the new location
11:11 AM Changeset [610] by Nicklas Nordborg
Moving affymetrix 0.7 tag to new location
11:11 AM Changeset [609] by Nicklas Nordborg
Moving affymetrix 0.6 tag to new location
11:09 AM Changeset [608] by Nicklas Nordborg
Moving perl/R webservices example project to new location
11:09 AM Changeset [607] by Nicklas Nordborg
Moving batchimporter project to new location
11:07 AM Changeset [606] by Nicklas Nordborg
Moving tab2mage project to new location
11:07 AM Changeset [605] by Nicklas Nordborg
Moving se.lu.thep.wenni project to new location
11:06 AM Changeset [604] by Nicklas Nordborg
Moving se.lu.thep.affymetrix project to new location
11:05 AM Changeset [603] by Nicklas Nordborg
Moving se.lu.onk project to new location
11:03 AM Changeset [602] by Nicklas Nordborg
Removed trunk folders that prevents moving the projects
11:00 AM Changeset [601] by Nicklas Nordborg
Moving Illumina project to new location (second try)
10:59 AM Changeset [600] by Nicklas Nordborg
Copied to incorrect directory
10:56 AM Changeset [599] by Nicklas Nordborg
Moving Illumina project to new location
10:53 AM Changeset [598] by Nicklas Nordborg
Preparing new directory structure

Feb 28, 2008:

12:36 AM Changeset [597] by Jari Häkkinen
Improved memory usage of NNIFileConverter.

Feb 26, 2008:

6:35 PM Changeset [596] by Jari Häkkinen
Removing obsolete member function declarations.
6:34 PM Changeset [595] by Jari Häkkinen
test should be the last directory visited for 'make'
3:24 PM Changeset [594] by Jari Häkkinen
Improved memory usage of BaseFileConverter. Previous implementation …
3:14 PM Changeset [593] by Jari Häkkinen
Clarified that absolute path needed fof configure.
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