Timeline
Feb 21, 2008:
- 4:44 PM Changeset [592] by
- References #101. Started on the plugin. A commit for the weekend.
- 11:40 AM Changeset [591] by
- References #93 Correct some comments and removed debug-code
- 11:36 AM Changeset [590] by
- References #93 You can now validate and extract meta-data from …
Feb 20, 2008:
- 3:49 PM Changeset [589] by
- References #100 Installation is now including SNP platform-variant and …
- 11:02 AM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) closed by
- fixed: (In [588]) Fixes #91: Import Illumina Bead Summary(IBS) files as raw data
- 11:02 AM Changeset [588] by
- Fixes #91: Import Illumina Bead Summary(IBS) files as raw data
- 9:58 AM Ticket #102 (Intensity calculator for Illumina SNP data) created by
- Since the raw data is stored in files, this plug-in needs to extract …
- 9:52 AM Ticket #101 (Import plug-in for SNP raw data) created by
- SNP data comes from BeadStudio? with one file that contains several …
- 9:45 AM Ticket #100 (Add Illumina SNP platform to the installation program) created by
- We now have a bit more information about the Illumina SNP platform. It …
Feb 18, 2008:
- 1:36 PM Changeset [587] by
- References #89 Correct the name of the plug-in
- 11:26 AM Changeset [586] by
- References #94: Import reporter annotations from bgx files Added …
Feb 13, 2008:
- 9:54 AM Changeset [585] by
- References #89: Installation program and documentation Updated …
Feb 12, 2008:
- 11:17 AM net.sf.basedb.illumina edited by
- (diff)
- 9:46 AM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) closed by
- fixed: (In [584]) Fixes #98: Implement validator and metadata extractor …
- 9:46 AM Changeset [584] by
- Fixes #98: Implement validator and metadata extractor plug-in for BGX files
- 9:40 AM Changeset [583] by
- References #89: Installation program and documentation Minor changes …
Feb 11, 2008:
- 3:35 PM Changeset [582] by
- Removed unused imports
- 3:14 PM Changeset [581] by
- References #90: Create array design from a bgx-file Fixed missing …
- 2:50 PM Changeset [580] by
- References #89: Installation program and documentation Added 'Getting …
- 2:46 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) reopened by
- The metadata extractor only extracts the number of controls, not the …
Feb 8, 2008:
- 2:52 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) closed by
- fixed: (In [579]) Fixes #98 Implement validator and metadata extractor …
- 2:52 PM Changeset [579] by
- Fixes #98 Implement validator and metadata extractor plug-in for BGX files
- 2:21 PM Changeset [578] by
- Fixes #90 Create array design from a bgx-file.
- 2:21 PM Ticket #90 (Create array design from a bgx-file) closed by
- fixed: (In [578]) Fixes #90 Create array design from a bgx-file.
- 1:33 PM Changeset [577] by
- References #89 Installation plug-in is now able to create Illumina …
Feb 7, 2008:
- 4:43 PM Changeset [576] by
- References #89 Changed to wiki format and configured some svn properties
- 2:19 PM Changeset [575] by
- Reference #94 Added more extended properties for Illumina reporters …
- 10:14 AM Ticket #99 (The tagging system of the repository should be changed) created by
- Jari has the details in his head, contact him on this issue.
- 9:54 AM Changeset [574] by
- Added information on how to resolve missing probe set situations.
Feb 6, 2008:
- 4:47 PM Changeset [573] by
- References #89 Added extended properties to be used with Illumina in BASE.
- 3:46 PM Changeset [572] by
- References #89 Change names, ids and variables according to …
- 11:28 AM Changeset [571] by
- References #89 Updated svn-properties for README file
- 11:22 AM Changeset [570] by
- References #89 Inserted the readme-text in wiki format.
Feb 5, 2008:
- 8:40 PM net.sf.basedb.illumina edited by
- (diff)
- 5:13 PM se.lu.thep.affymetrix edited by
- APT plug-in location changed. (diff)
- 5:11 PM PluginDownload edited by
- APT plug-in location changed. (diff)
- 4:51 PM Changeset [569] by
- References #98 The validator and meta data reader is done. The …
- 12:27 PM Changeset [568] by
- References #91: Import Illumina scandata files as raw data Call …
Feb 1, 2008:
- 4:45 PM Changeset [567] by
- References #98 A start of a BGX validator/metadatareader.
- 10:59 AM Changeset [566] by
- References #89: Installation program and documentation Added rest of …
Jan 31, 2008:
- 4:48 PM Changeset [565] by
- References #90 Added a default plugin configuration to come along with …
- 3:01 PM Changeset [564] by
- References #91: Import Illumina scandata files as raw data Error …
- 9:14 AM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) created by
- It should simply check the [Heading] section in the beginning of the …
Jan 30, 2008:
- 2:51 PM Changeset [563] by
- References #90 Refine comments and removed some blank lines.
- 2:46 PM Changeset [562] by
- References #91: Import Illumina scandata files as raw data The …
- 2:29 PM Changeset [561] by
- References #90 The plug-in can now be used to import features to an …
Jan 29, 2008:
- 2:53 PM Changeset [560] by
- References #91: Import Illumina scandata files as raw data A skeleton …
- 8:51 AM Changeset [559] by
- References #94: Import reporter annotations from bgx files The …
Jan 28, 2008:
- 4:31 PM Changeset [558] by
- have fixed several bugs after testing whole imports, notably a problem …
- 2:03 PM Changeset [557] by
- References #89: Installation program and documentation Documented the …
- 1:58 PM Changeset [556] by
- References #94: Import reporter annotations from bgx files First …
- 11:48 AM Changeset [555] by
- References #89 Added more property checks when an item already exists …
Jan 26, 2008:
- 12:22 AM Ticket #97 (Remove Plier support from se.lu.thep.affymetrix) created by
- The Plier algorithm is a part of the …
- 12:16 AM Ticket #73 (Plier fails to import data) closed by
- wontfix: The APT …
Jan 25, 2008:
- 11:35 PM Ticket #96 (Make the se.lu.thep.affymetrix plug-in compatible with the ...) created by
- 10:39 PM PluginDownload edited by
- Added APT plug-in. (diff)
- 10:39 PM se.lu.thep.affymetrix edited by
- Added note about the APT plug-in (superseeds Plier) (diff)
- 10:24 PM PluginDownload edited by
- Clarifying plugin compatibility statement. (diff)
- 4:38 PM Changeset [554] by
- References #89 Illumina items are now created by the installation …
- 2:47 PM Ticket #95 (Intensity calculator for Illumina expression data) created by
- The regular intensity calculator can be used but only for copying the …
- 2:39 PM Ticket #94 (Import reporter annotations from bgx files) created by
- See also #90. We probably need a different plug-in for the reporter …
- 2:34 PM Ticket #92 (Create Illumina SNP raw data type) closed by
- duplicate: Part of ticket #89
- 2:25 PM Changeset [553] by
- References #89: Installation program and documentation Added INSTALL file
Jan 24, 2008:
- 5:41 PM Changeset [552] by
- have added input validation (mandatory fields check) added back …
- 4:52 PM Changeset [551] by
- References #89 Start to insert illumina items with the installation plug-in
Jan 23, 2008:
- 3:21 PM Changeset [550] by
- have restructured the code completely that writes the hybs section
Jan 22, 2008:
- 2:41 PM Changeset [549] by
- References #89: Installation program and documentation Updated …
- 11:01 AM Ticket #93 (Illumina SNP validator and meta-data extractor) created by
- The data files should be validated automatically and some data such as …
- 10:55 AM Ticket #92 (Create Illumina SNP raw data type) created by
- Needed for SNP data from the Illumina platform. The raw files are to …
- 10:44 AM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) created by
- The rawest form of raw data generated by the Illumina scanner are the …
- 10:42 AM Changeset [548] by
- new page added to gather additional info needed for autogeneration of …
- 10:36 AM Ticket #90 (Create array design from a bgx-file) created by
- A bgx file contains array design information for Illumina arrays. The …
- 10:27 AM Ticket #89 (Installation program and documentation) created by
- Create an installation program with documentation. The installation …
- 8:40 AM net.sf.basedb.illumina created by
- Created front page for the Illumina plug-ins package
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