Timeline



Dec 28, 2006:

2:18 AM Ticket #44 (Add information on how to compile RMAExpressConsole to the RMAExpress ...) created by Jari Häkkinen
1:45 AM Ticket #43 (Add request for proper default permissions (se.lu.thep.affymetrix).) created by Jari Häkkinen
Currently the plug-in requires that it should be run with 'no …

Dec 22, 2006:

4:29 PM Changeset [222] by Johan Enell
References #37

Dec 20, 2006:

3:07 PM Changeset [221] by Johan Enell
Fixes #40
3:07 PM Ticket #40 (Create virtual bioassay containing analysis results) closed by Johan Enell
fixed: (In [221]) Fixes #40

Dec 19, 2006:

10:35 AM Changeset [220] by Johan Enell
Cleaned up the code

Dec 18, 2006:

4:16 PM Changeset [219] by Johan Enell
Fixes #32 The normsdist function works if used in the correct way. The …
4:16 PM Ticket #32 (Create histogram plot) closed by Johan Enell
fixed: (In [219]) Fixes #32 The normsdist function works if used in the …
12:17 PM DeveloperPage edited by Jari Häkkinen
Adding dev information (diff)
11:40 AM Ticket #42 (Add sample extended-properties.xml and configuration files needed for ...) created by Jari Häkkinen
The README doc describes how change BASE to use the RMA plug-in. The …

Dec 13, 2006:

2:56 PM Changeset [218] by Jari Häkkinen
Creating directories for new developers.

Dec 8, 2006:

5:20 PM Changeset [217] by Johan Enell
References #32. Needs a normsdist function and the HistogramDataset?
4:02 PM Ticket #41 (Add data to output: sign flag, sign specific rank) created by johan
Add a column to the output containing a sign flag (+ or -) indicating …
3:39 PM Ticket #40 (Create virtual bioassay containing analysis results) created by johan
The results from running the Z-test analysis can be viewed as a table …

Dec 7, 2006:

4:55 PM Changeset [216] by Johan Enell
moved plotfunctions to their own class
4:17 PM Changeset [215] by Johan Enell
corrected the classpath
3:16 PM Ticket #30 (Create combination plot) closed by Johan Enell
fixed
3:16 PM Ticket #29 (Create plot FDR vs rank) closed by Johan Enell
fixed
3:15 PM Changeset [214] by Johan Enell
Fixes #29 #30
12:27 PM Ticket #39 (create reporter list (se.lu.onk.ztest)) created by johan
Have the Z-test plugin automatically create a reporter list from …
11:18 AM Ticket #28 (Create plot observed/expected) closed by Johan Enell
fixed: (In [213]) Fixes #28
11:18 AM Changeset [213] by Johan Enell
Fixes #28

Dec 6, 2006:

2:01 PM Changeset [212] by Johan Enell
Case sensitivity added again. Apparently it was needed…
1:50 PM Changeset [211] by Johan Enell
made the filter case insensitive
1:42 PM Changeset [210] by Johan Enell
Fixes #38
1:42 PM Ticket #38 (Parameterparser splits the annotations values parameter incorrect) closed by Johan Enell
fixed: (In [210]) Fixes #38
10:07 AM Changeset [209] by Johan Enell
added ignore property, not using newline as separator

Dec 5, 2006:

2:43 PM Changeset [208] by Johan Enell
JFreeChart added
2:39 PM Ticket #38 (Parameterparser splits the annotations values parameter incorrect) created by Johan Enell
The regexp that splits the annotation values is incorrect. It should …

Dec 4, 2006:

4:25 PM Changeset [207] by Johan Enell
Fixes #31 external id, symbol and locuslink is written to table
4:25 PM Ticket #31 (More reporter info) closed by Johan Enell
fixed: (In [207]) Fixes #31 external id, symbol and locuslink is written to table
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