Opened 8 years ago
Last modified 8 years ago
#898 closed task
INCA import should create trimmed tab-delimited file with synonymized data — at Version 3
Reported by: | olle | Owned by: | olle |
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Priority: | major | Milestone: | Reggie v4.6 |
Component: | net.sf.basedb.reggie | Keywords: | |
Cc: |
Description (last modified by )
INCA import should create a trimmed tab-delimited file with synonymized data for analysis outside Reggie/BASE. The new file should be based on the tab-delimited file used for INCA import, with the following differences:
- Accrued entries, i.e. those with personal numbers, should have the latter exchanged for the patient item names ("PAT" + 6 figures) in the SCAN-B database.
- Apart from columns with headers "
PersonalNo
" and "PAT_ID
", only data in columns corresponding to INCA annotation types should be included.
Change History (3)
comment:1 by , 8 years ago
Status: | new → assigned |
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comment:2 by , 8 years ago
Traceability note:
- Creation of a csv file to be used when requesting information from the INCA database was introduced in Ticket #487 (Export information intended for INCA).
- Import of an INCA csv file was introduced in Ticket #525 (Import data from INCA).
- INCA import was updated in Ticket #896 (INCA import should include laterality mapping column).
comment:3 by , 8 years ago
Description: | modified (diff) |
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Ticket description updated:
a. Clarifying that personal numbers should be exchanged for SCAN-B patient item names.
b. Column "PERSNR
" is not needed in the output file, since column "PersonalNo
" is included.
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Ticket accepted.