id summary reporter owner description type status priority milestone component resolution keywords cc 1158 FASTQ files for external samples should not have the prefix in their names Nicklas Nordborg Nicklas Nordborg "External samples typically have a prefix followed by and underscore and then the rest of the sample name: `NN_ABC`. This name is used throughout the lab processing and secondary analysis to generate names of child items and files. For example FASTQ files: {{{ NN_ABC.m.c.lib.g.R1_fastq.gz NN_ABC.m.c.lib.g.R2_fastq.gz }}} The prefix should be kept on items in BASE, but it should be skipped for file names, since the prefix also causes a top-level directory to be created: {{{ NN/ABC/m.c.lib/ABC.m.c.lib.g.R1.fastq.gz NN/ABC/m.c.lib/ABC.m.c.lib.g.R2.fastq.gz }}} " enhancement closed minor Reggie v4.23 net.sf.basedb.reggie fixed