id,summary,reporter,owner,description,type,status,priority,milestone,component,resolution,keywords,cc 1158,FASTQ files for external samples should not have the prefix in their names,Nicklas Nordborg,Nicklas Nordborg,"External samples typically have a prefix followed by and underscore and then the rest of the sample name: `NN_ABC`. This name is used throughout the lab processing and secondary analysis to generate names of child items and files. For example FASTQ files: {{{ NN_ABC.m.c.lib.g.R1_fastq.gz NN_ABC.m.c.lib.g.R2_fastq.gz }}} The prefix should be kept on items in BASE, but it should be skipped for file names, since the prefix also causes a top-level directory to be created: {{{ NN/ABC/m.c.lib/ABC.m.c.lib.g.R1.fastq.gz NN/ABC/m.c.lib/ABC.m.c.lib.g.R2.fastq.gz }}} ",enhancement,closed,minor,Reggie v4.23,net.sf.basedb.reggie,fixed,,