Opened 5 years ago

Last modified 5 years ago

#1129 closed task

DNA pre-normalization — at Initial Version

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v4.23
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

We are about to start processing DNA. In preparation for this we need a pre-normalization functionality that is similar to the pre-normalization done for RNA.

  • The extraction registration wizard should be updated with functionality to mark DNA that should be pre-normalized. Flagging is not needed.
  • A 'DNA concentration normalization' wizard is needed. It should have more or less the same functionality as the RNA counterpart. Flagging is not needed. We probably need to define new protocol and annotation types to hold target amounts and volumes.
  • We may also need an additional label if we decide to store the pre-normalized DNA in tubes. The other option is to store the DNA in plates which requires new functionality for creating plates and assigning positions to the pre-normalized DNA.

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