id,summary,reporter,owner,description,type,status,priority,milestone,component,resolution,keywords,cc 100,Add Illumina SNP platform to the installation program,Nicklas Nordborg,Martin Svensson,"We now have a bit more information about the Illumina SNP platform. It should be a file-only platform. The array design needs ''manifest'' files which are similar to the BGX files used in the expression platform. A manual step is needed to create the manifest files. Start with a BPM file and open it in BeadStudio. Save the file as a csv file. See #93. Raw data comes from Beadstudio and there are several data sets in a single file. A custom plug-in will use the original file, create one raw bioassay for each data set and then split the original file into one file with data for a single data set in it. See #101. So, the installation program needs to create: * A file-only platform variant, the idea is that this should be a 3-channel data type * A new data file type for the manifest files (linked with array design, required) * A new data file type for the original data file (linked with raw bioassay, optional) * A new data file type for the split data file (linked with raw bioassay, required) ",enhancement,closed,critical,Illumina package v1.0,net.sf.basedb.illumina,fixed,,