$Id: INSTALL 932 2008-12-18 11:40:16Z jari $ ---------------------------------------------------------------------- {{{ Copyright (C) 2008 Jari Häkkinen, Martin Svensson This file is part of the Normalizers plug-in package for BASE (net.sf.based.normalizers). The package is available at http://baseplugins.thep.lu.se/ BASE main site is http://base.thep.lu.se/ This is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. The software is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see . }}} ---------------------------------------------------------------------- == How to install the Normalization plug-ins package for BASE. == == Requirements == 1. BASE 2.7.0 or later. == Installation == 1. Unpack the tar.gz file to a directory of your choice. 2. Copy the normalization-plugins.jar to your BASE plug-ins directory. This directory is specified by the 'plugins.dir' option in your base.config file and defaults to /plugins. [[br]][[br]] If you have job agents that are running from another location, you must also copy the jar file to a location the job agents has access to. 3. Log in to BASE as an administrator and run the plug-in auto-installation wizard by going to ''Administrate -> Plugins -> Definitions'' and click on the 'New' button. 4. Select the 'Automatically' option. 5. The auto-detection should find plug-ins for the algorithms listed below. You should change the 'Install' value to 'yes' for those which should be installed. * Average normalization * Quantile Normalization 6. Finish the installation wizard. 7. Done. The normalization plug-ins are now installed. Make sure that the job agents have access to the same normalization-plugins.jar file as the Tomcat web server. If the job agents are not running from the same BASE installation directory, you may need to copy the files to a proper location. We recommend that you always put the normalization-plugins.jar inside the BASE server plug-in directory (plugins.dir). If you do, BASE will automatically find the JAR file in job agents. Otherwise, you may have to configure the JAR path manually for each job agent.