Changes between Version 3 and Version 4 of net.sf.basedb.reggie/notes427


Ignore:
Timestamp:
May 18, 2020, 9:04:22 AM (4 years ago)
Author:
Nicklas Nordborg
Comment:

Added instructions for running SSP models for existing raw bioassays

Legend:

Unmodified
Added
Removed
Modified

  • net.sf.basedb.reggie/notes427

    v3 v4  
    5555}}}
    5656 
     57== C. Run SSP for existing !StringTie raw bioassays ==
     58
     59The configured SSP models are running automatically for new sequencing runs if auto-confirmation
     60is selected.
     61
     62To run SSP for existing data, add !StringTie raw bioassays to the `Single Sample Predictor analysis`
     63item list.
     64
     65Then go to the **Start Single Sample Predictor analysis** wizard in the
     66**Secondary analysis/Hisat and !StringTie pipeline** section and start jobs.
     67
     68It is possible to
     69run 500 raw bioassays at the same time.
     70