wiki:net.sf.basedb.reggie/notes410

Version 1 (modified by Nicklas Nordborg, 3 years ago) (diff)

Started to write update notes for Reggie 4.10

Updating to Reggie 4.10

The following changes can be made after installing Reggie 4.10.

Update the MultPieces annotation for Lysate items

All Lysate items with a creation date after YYYY-MM-DD that has no value for the MultPieces annotation should be update to MultPieces=false. It should be fairly simple to filter out the lysates in the web interface and then export the "Name" column. Open the exported file in a spreadsheet and add a second column for the MultPieces annotation. Use the annotation importer to update the annotation.

Set ReferenceDate and ReferenceDateSource on all Case items

The ReferenceDate and ReferenceDateSource are new annotations that should be set on all existing Case item. There are four cases that depends on what information we already have about the case.

  1. All cases that has a value for the INCA_A030DiaDat annotation should be update to: ReferenceDate=INCA_A030DiaDat and ReferenceDateSource=IncaDiagnosisDate.
  2. TODO
  3. Remaining cases that has a value for the ConsentDate annotation should be updated to: ReferenceDate=ConsentDate and ReferenceDateSource=ConsentDate.
  4. All remaining cases should be updated to: ReferenceDate=Registered and ReferenceDateSource=RegistrationDate.

1, 3 and 4 can be done with a simple export/import operation with the help of a spreadsheet to fill in the ReferenceDateSource value.