wiki:net.sf.basedb.meludi

MeLuDI extension for BASE

This package is an extension package to BASE with registration wizards for melanoma-lung cancer projects, in analogy with the package "Reggie" for the SCAN-B breast cancer project. It is named "MeLuDI" after "melanoma/lung cancer diagnostics".

Documentation

  • The README contains information about this package, how to install it and how to compile it.
  • Wiki page MeLuDI Software Information contains some background and behind-the-scene information on the software, that might be of interest if you need to complement MeLuDI by working directly against the BASE user interface.

License

GNU General Public License version 3.

Download

Version Revision Date Binary (tar.gz) BASE Version Special notes
1.0 3030 2014-12-11 meludi-1.0.tar.gz (330.8 KB) 3.3.2 or later Tested successfully with BASE v.3.3.2 changelog
1.1 3053 2014-12-18 meludi-1.1.tar.gz (325.2 KB) 3.3.2 or later Tested successfully with BASE v.3.3.2 changelog
1.2 3191 2015-03-18 meludi-1.2.tar.gz (405.7 KB) 3.4.0 or later update notes changelog
1.2.1 3241 2015-04-13 meludi-1.2.1.tar.gz (426.0 KB) 3.4.0 or later update notes changelog
1.2.2 3257 2015-04-18 meludi-1.2.2.tar.gz (429.2 KB) 3.4.0 or later update notes changelog
1.2.3 3296 2015-04-30 meludi-1.2.3.tar.gz (435.5 KB) 3.4.0 or later changelog
1.2.4 3346 2015-05-19 meludi-1.2.4.tar.gz (440.7 KB) 3.4.0 or later changelog
1.2.5 3371 2015-06-08 meludi-1.2.5.tar.gz (436.0 KB) 3.4.0 or later changelog
1.3.1 3453 2015-07-28 meludi-1.3.1.tar.gz (550.9 KB) 3.5.0 or later update notes changelog
1.3.2 3511 2015-09-24 meludi-1.3.2.tar.gz (598.8 KB) 3.5.0 or later update notes changelog
1.3.3 3522 2015-10-01 meludi-1.3.3.tar.gz (599.6 KB) 3.5.0 or later update notes changelog
1.4.0 3707 2016-01-19 meludi-1.4.0.tar.gz (704.8 KB) 3.7.0 or later update notes changelog
1.4.1 3711 2016-01-20 meludi-1.4.1.tar.gz (704.8 KB) 3.7.0 or later update notes changelog
1.4.2 3728 2016-02-02 meludi-1.4.2.tar.gz (714.1 KB) 3.7.0 or later update notes changelog
1.4.3 3873 2016-04-22 meludi-1.4.3.tar.gz (713.0 KB) 3.7.0 or later update notes changelog

The latest development (maybe unstable; do not use on a production server) revision can be checked out from the repository using the following command:

svn co http://baseplugins.thep.lu.se/svn/extensions/net.sf.basedb.meludi/trunk meludi-devel

Contribute

After making modifications to the source code, compose a clear and concise log message to describe those changes and the reasons for them. Then, send an email to the developers list containing your log message and the output of svn diff (from the top of your subversion working copy). If the community members consider your changes acceptable, someone who has commit privileges will add your changes to the public source code tree. Recall that permission to directly commit changes to the repository is granted on merit - if you demonstrate comprehension of subversion, programming competency, and a team spirit, you will likely be awarded that permission.

Project update

On 2016-01-21 it was announced that the parent project using the MeLuDI software would not be continued after midsummer 2016, since another laboratory should perform the analyses in question. It was decided to update the software with fixes and features already agreed upon at the time of the announcement, and release MeLuDI v1.4.2 directly after the latter updates had been tested. Further updates of the MeLuDI software will be related to use of the latter in other projects, with a laboratory pipeline similar to the original "MeLuDI" project.

Todo

#911
MeLuDI should support multiple projects

Last modified 10 months ago Last modified on Sep 23, 2016, 4:45:13 PM

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