Timeline
Jun 9, 2020:
- 1:09 PM Milestone Reggie v4.27.2 completed
- Bug fixes and enhancements for Reggie 4.27.1. Revision Log: …
- 1:09 PM net.sf.basedb.reggie edited by
- Released Reggie 4.27.2 (diff)
- 1:06 PM Changeset [5966] by
- Tagging Reggie 4.27.2
- 1:05 PM Changeset [5965] by
- Preparing to release Reggie 4.27.2
- 9:06 AM net.sf.basedb.reggie edited by
- Added an entry for upcoming release Reggie 4.27.2 to the download table. (diff)
- 9:04 AM Tickets #1252,1253 batch updated by
- fixed
- 9:03 AM Ticket #1252 (Convert SSP score annotations to TEXT type) updated by
-
Description changed
Jun 4, 2020:
- 2:54 PM Ticket #1253 (Change the name in VCF file created by variant calling) updated by
-
Description changed
- 2:33 PM Ticket #1253 (Change the name in VCF file created by variant calling) updated by
- In 5964: […]
- 2:33 PM Changeset [5964] by
- References #1253: Change the name in VCF file created by variant …
- 2:02 PM Ticket #1253 (Change the name in VCF file created by variant calling) created by
- The current variant calling pipeline gives the parent Library item as …
- 1:57 PM Ticket #1252 (Convert SSP score annotations to TEXT type) updated by
- In 5963: […]
- 1:57 PM Changeset [5963] by
- References #1252: Convert SSP score annotations to TEXT type …
- 1:45 PM Ticket #1252 (Convert SSP score annotations to TEXT type) updated by
-
Description changed
- 10:56 AM Ticket #1252 (Convert SSP score annotations to TEXT type) created by
-
It is the same problem as in #1238. The
SSP_*_Scoresannotations …
Jun 3, 2020:
- 9:19 AM Changeset [5962] by
- Merge Reggie 4.27.1 to the trunk
- 9:14 AM Milestone Reggie v4.27.1 completed
- Bug fixes and enhancements for Reggie 4.27. Revision Log: …
- 9:14 AM net.sf.basedb.reggie edited by
- Released Reggie 4.27.1 (diff)
- 9:11 AM Changeset [5961] by
- Tagging Reggie 4.27.1
- 9:10 AM Changeset [5960] by
- Preparing to release Reggie 4.27.1
- 9:03 AM Ticket #1251 (Add a mode to SSP plugin that run models for all rawbioassays with no value) updated by
- In 5959: […]
- 9:03 AM Changeset [5959] by
- References #1251: Add a mode to SSP plugin that run models for all …
- 8:49 AM Ticket #1251 (Add a mode to SSP plugin that run models for all rawbioassays with no value) updated by
- In 5958: […]
- 8:49 AM Changeset [5958] by
- References #1251: Add a mode to SSP plugin that run models for all …
Jun 2, 2020:
- 2:48 PM Ticket #1251 (Add a mode to SSP plugin that run models for all rawbioassays with no value) closed by
- fixed
- 2:47 PM Ticket #1250 (The installation wizard should check/install annotation types needed ...) closed by
- fixed
- 1:46 PM Ticket #1250 (The installation wizard should check/install annotation types needed ...) updated by
- In 5957: […]
- 1:46 PM Changeset [5957] by
- References #1250: The installation wizard should check/install …
- 8:28 AM Ticket #1251 (Add a mode to SSP plugin that run models for all rawbioassays with no value) updated by
- In 5956: […]
- 8:28 AM Changeset [5956] by
- References #1251: Add a mode to SSP plugin that run models for all …
- 8:22 AM Ticket #1251 (Add a mode to SSP plugin that run models for all rawbioassays with no value) created by
- This would be useful if a new SSP model is added later. Then a single …
Jun 1, 2020:
- 8:26 AM Ticket #1250 (The installation wizard should check/install annotation types needed ...) updated by
- In 5955: […]
- 8:26 AM Changeset [5955] by
- References #1250: The installation wizard should check/install …
- 8:18 AM Ticket #1250 (The installation wizard should check/install annotation types needed ...) created by
- Almost all information that we need is possible to get automatically. …
May 28, 2020:
- 10:45 AM Ticket #1249 (The temporary item list for importing variant call annotations is no ...) closed by
- fixed: In 5954: […]
- 10:45 AM Changeset [5954] by
- Fixes #1249: The temporary item list for importing variant call …
- 10:34 AM Ticket #1249 (The temporary item list for importing variant call annotations is no ...) created by
- See #1229. Once the list has been processed it is marked with …
- 8:45 AM Ticket #1248 (Translations for SSP plug-in should be configured in reggie-config.xml) closed by
- fixed: In 5953: […]
- 8:45 AM Changeset [5953] by
- Fixes #1248: Translations for SSP plug-in should be configured in …
- 8:44 AM Ticket #1248 (Translations for SSP plug-in should be configured in reggie-config.xml) created by
- It would be nice if the translations could be configured instead of …
May 27, 2020:
- 2:17 PM Ticket #1247 (Add more translations to SSP plug-in) closed by
- fixed: In 5952: […]
- 2:17 PM Changeset [5952] by
- Fixes #1247: Add more translations to SSP plug-in
- 12:52 PM Ticket #1247 (Add more translations to SSP plug-in) created by
- A new set of SSP models require the following translations: * Hog -> …
- 11:51 AM Ticket #1246 (Race condition when displaying progress message) closed by
- fixed: In 5951: […]
- 11:51 AM Changeset [5951] by
- Fixes #1246: Race condition when displaying progress message The …
- 10:20 AM Changeset [5950] by
- Creating bugfix branch for Reggie 4.27
- 8:25 AM Ticket #1246 (Race condition when displaying progress message) created by
- There is a possible race condition in all(?) wizards that use progress …
May 20, 2020:
- 11:29 AM net.sf.basedb.reggie/notes427 edited by
- Fixed typos (diff)
- 10:29 AM Changeset [5949] by
- Changes for future release Reggie 4.28
- 10:26 AM Milestone Reggie v4.27 completed
- See Reggie extension page for more information.
- 10:26 AM PluginDownload edited by
- Released Reggie 4.27 (diff)
- 10:25 AM net.sf.basedb.reggie edited by
- Released Reggie 4.27 (diff)
- 10:19 AM Changeset [5948] by
- Tagging Reggie 4.27
- 10:18 AM Changeset [5947] by
- Preparing to release Reggie 4.27
- 9:58 AM Changeset [5946] by
- Remove unused imports.
- 9:41 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) updated by
- In 5945: […]
- 9:41 AM Changeset [5945] by
- References #1239: Include Single Sample Predictor models in the …
- 9:30 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) updated by
- In 5944: […]
- 9:30 AM Changeset [5944] by
- References #1239: Include Single Sample Predictor models in the …
May 19, 2020:
May 18, 2020:
- 1:19 PM Ticket #1243 (Improve status checking for NovaSeq) updated by
-
Description changed
- 11:51 AM net.sf.basedb.reggie/notes427 edited by
- (diff)
- 11:50 AM net.sf.basedb.reggie/notes427 edited by
- Added instructions for installing SSP scripts and models (diff)
- 9:04 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) updated by
- In 5943: […]
- 9:04 AM Changeset [5943] by
- References #1239: Include Single Sample Predictor models in the …
- 9:04 AM net.sf.basedb.reggie/notes427 edited by
- Added instructions for running SSP models for existing raw bioassays (diff)
- 8:55 AM net.sf.basedb.reggie/notes427 edited by
- Added instructions for adding SSP models to reggie-config.xml (diff)
- 8:48 AM net.sf.basedb.reggie/notes427 edited by
- Added instructions for importing SSP annotation types (diff)
- 8:42 AM net.sf.basedb.reggie/notes427 created by
- Started to write update instructions for Reggie 4.27
- 8:34 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) closed by
- fixed
- 8:33 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) updated by
- In 5942: […]
- 8:33 AM Changeset [5942] by
- References #1239: Include Single Sample Predictor models in the …
- 8:15 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) updated by
- In 5941: […]
- 8:15 AM Changeset [5941] by
- References #1239: Include Single Sample Predictor models in the …
May 16, 2020:
- 5:36 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5940: […]
- 5:36 PM Changeset [5940] by
-
Refs #1029. Updates due to version number change to "
1.6.0-dev". … - 4:59 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5939: […]
- 4:59 PM Changeset [5939] by
-
Refs #1029. Updates due to version number change to "
1.6.0b9". 1. … - 4:50 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- In 5938: […]
- 4:50 PM Changeset [5938] by
- Refs #1029. Referral form generation updated in generation of referral …
May 15, 2020:
- 11:38 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) updated by
- In 5937: […]
- 11:38 AM Changeset [5937] by
- References #1239: Include Single Sample Predictor models in the …
May 14, 2020:
- 1:20 PM Ticket #1245 (Picard demux should output compressed fastq files) closed by
- fixed: In 5936: […]
- 1:20 PM Changeset [5936] by
- Fixes #1245: Picard demux should output compressed fastq files
- 9:02 AM Ticket #1245 (Picard demux should output compressed fastq files) created by
- Demuxing the new NovaSeq sequencing runs with the S1 flow cell that …
May 12, 2020:
- 9:09 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Design update for the NordicTrip referral form generation: * …
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