Timeline



Nov 21, 2018:

4:54 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
Design update: * As the result of discussions at the …
4:12 PM Ticket #1074 (Add more subtypes) updated by Nicklas Nordborg
(In [5134]) References #1074: Add more subtypes Added NoSpecimen subtype.
4:12 PM Changeset [5134] by Nicklas Nordborg
References #1074: Add more subtypes Added NoSpecimen subtype.
4:09 PM Ticket #1074 (Add more subtypes) updated by Nicklas Nordborg
Description changed
3:51 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5133]) References #1075: Change the release exporter to work …
3:51 PM Changeset [5133] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
3:51 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5132]) References #1075: Change the release exporter to work …
3:51 PM Changeset [5132] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
2:05 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5131]) References #1075: Change the release exporter to work …
2:05 PM Changeset [5131] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
1:35 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5130]) References #1075: Change the release exporter to work with …
1:35 PM Changeset [5130] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
12:07 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5129]) Refs #1029. Updates due to version number change to …
12:07 PM Changeset [5129] by olle
Refs #1029. Updates due to version number change to "1.6.0-dev". …
12:04 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5128]) Refs #1029. Updates due to version number change to …
12:04 PM Changeset [5128] by olle
Refs #1029. Updates due to version number change to "1.6.0a10". 1. …
11:37 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5127]) Refs #1029. FFPE section order form wizard updated with …
11:37 AM Changeset [5127] by olle
Refs #1029. FFPE section order form wizard updated with new button …
10:14 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5126]) Refs #1029. FFPE section (specimen) registration wizard …
10:14 AM Changeset [5126] by olle
Refs #1029. FFPE section (specimen) registration wizard updated to …
9:56 AM Ticket #1084 (DataFileFolder annotation should always set a default value) closed by Nicklas Nordborg
fixed: (In [5125]) Fixes #1084: DataFileFolder annotation should always set a …
9:56 AM Changeset [5125] by Nicklas Nordborg
Fixes #1084: DataFileFolder annotation should always set a default value
9:55 AM Ticket #1084 (DataFileFolder annotation should always set a default value) created by Nicklas Nordborg
Existing items that doesn't have a value for DataFilesFolder should …
9:48 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5124]) References #1075: Change the release exporter to work with …
9:48 AM Changeset [5124] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
9:11 AM Ticket #1074 (Add more subtypes) updated by Nicklas Nordborg
(In [5123]) References #1074: Add more subtypes The "NO" subtype …
9:11 AM Changeset [5123] by Nicklas Nordborg
References #1074: Add more subtypes The "NO" subtype should be "No".
9:10 AM Ticket #1071 (Installation wizard doesn't show error message) updated by Nicklas Nordborg
(In [5122]) References #1071: Installation wizard doesn't show error …
9:10 AM Changeset [5122] by Nicklas Nordborg
References #1071: Installation wizard doesn't show error message …
9:08 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5121]) Refs #1029. FFPE section (specimen) registration wizard …
9:08 AM Changeset [5121] by olle
Refs #1029. FFPE section (specimen) registration wizard updated with …
8:15 AM Ticket #1083 (Add mBAF plot column to derived bioassay list) closed by Nicklas Nordborg
fixed: (In [5120]) Fixes #1083: Add mBAF plot column to derived bioassay list …
8:15 AM Changeset [5120] by Nicklas Nordborg
Fixes #1083: Add mBAF plot column to derived bioassay list The …
8:11 AM Ticket #1083 (Add mBAF plot column to derived bioassay list) created by Nicklas Nordborg
The column should be used to display thumbnails of the mBAF plots in …
8:04 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5119]) Refs #1029. FFPE section (specimen) registration wizard …
8:04 AM Changeset [5119] by olle
Refs #1029. FFPE section (specimen) registration wizard updated by …
7:56 AM Ticket #1082 (HaplotypeCaller should not write command line parameters in result file) closed by Nicklas Nordborg
fixed: (In [5118]) Fixes #1082: HaplotypeCaller should not write command line …
7:56 AM Changeset [5118] by Nicklas Nordborg
Fixes #1082: HaplotypeCaller should not write command line parameters …
7:45 AM Ticket #1082 (HaplotypeCaller should not write command line parameters in result file) updated by Nicklas Nordborg
Description changed
7:41 AM Ticket #1082 (HaplotypeCaller should not write command line parameters in result file) created by Nicklas Nordborg
Just in case the command line contains some sensitive information. …

Nov 20, 2018:

4:09 PM Ticket #1081 (The release exporter should export more data) updated by Nicklas Nordborg
(In [5117]) References #1081: The release exporter should export more …
4:09 PM Changeset [5117] by Nicklas Nordborg
References #1081: The release exporter should export more data The …
3:58 PM Ticket #1081 (The release exporter should export more data) updated by Nicklas Nordborg
Description changed
3:54 PM Ticket #1081 (The release exporter should export more data) updated by Nicklas Nordborg
Status changed
3:03 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5116]) Refs #1029. FFPE block order form wizard updated to no …
3:03 PM Changeset [5116] by olle
Refs #1029. FFPE block order form wizard updated to no longer write …
2:39 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
* Known issues with current FFPE section (specimen) registration …
2:13 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5115]) Refs #1029. Case summary updated to support new naming …
2:13 PM Changeset [5115] by olle
Refs #1029. Case summary updated to support new naming scheme for DNA …
1:42 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5114]) Refs #1029. FFPE section (specimen) registration wizard …
1:42 PM Changeset [5114] by olle
Refs #1029. FFPE section (specimen) registration wizard updated: 1. …
1:06 PM Ticket #1080 (Add "Manual" option to the DoNotUse annotation type) closed by Nicklas Nordborg
fixed: (In [5113]) Fixes #1080: Add "Manual" option to the DoNotUse
1:06 PM Changeset [5113] by Nicklas Nordborg
Fixes #1080: Add "Manual" option to the DoNotUse annotation type
1:03 PM Ticket #1079 (The FrozenTissue date importer should ignore lines without date) closed by Nicklas Nordborg
fixed: (In [5112]) Fixes #1079: The FrozenTissue date importer should ignore …
1:03 PM Changeset [5112] by Nicklas Nordborg
Fixes #1079: The FrozenTissue date importer should ignore lines …
12:55 PM Ticket #1081 (The release exporter should export more data) created by Nicklas Nordborg
For existing items we should export more annotations/other data: * …
12:54 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5111]) Refs #1029. FFPE section registration wizard prepared for …
12:54 PM Changeset [5111] by olle
Refs #1029. FFPE section registration wizard prepared for new sample …
12:52 PM Tickets #1075,​1078 batch updated by Nicklas Nordborg
Status changed
12:52 PM Ticket #1080 (Add "Manual" option to the DoNotUse annotation type) created by Nicklas Nordborg
12:51 PM Ticket #1079 (The FrozenTissue date importer should ignore lines without date) created by Nicklas Nordborg
This includes empty lines and lines with only white-space. Seems like …
10:24 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5110]) Refs #1029. Support for showing connected "chained" items …
10:24 AM Changeset [5110] by olle
Refs #1029. Support for showing connected "chained" items in Case …

Nov 19, 2018:

2:35 PM Ticket #1074 (Add more subtypes) updated by Nicklas Nordborg
(In [5109]) References #1074: Add more subtypes Added Retract, No, …
2:35 PM Changeset [5109] by Nicklas Nordborg
References #1074: Add more subtypes Added Retract, No, NotAsked, …
2:24 PM Ticket #1074 (Add more subtypes) updated by Nicklas Nordborg
Status, Owner, Description changed
2:22 PM net.sf.basedb.reggie/notes421 edited by Nicklas Nordborg
Added notes about ticket #1078 (diff)
2:06 PM Ticket #1078 ("Not asked" subtype should be renamed to "NotAsked") updated by Nicklas Nordborg
(In [5108]) References #1078: "Not asked" subtype should be renamed to …
2:06 PM Changeset [5108] by Nicklas Nordborg
References #1078: "Not asked" subtype should be renamed to "NotAsked" …
1:27 PM Ticket #1078 ("Not asked" subtype should be renamed to "NotAsked") created by Nicklas Nordborg
The change must be made manually by an administrator before updating …
1:25 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5107]) References #1075: Change the release exporter to work with …
1:25 PM Changeset [5107] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
10:58 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5106]) References #1075: Change the release exporter to work with …
10:58 AM Changeset [5106] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
8:30 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5105]) References #1075: Change the release exporter to work with …
8:30 AM Changeset [5105] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …

Nov 16, 2018:

2:19 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5104]) References #1075: Change the release exporter to work with …
2:19 PM Changeset [5104] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
12:32 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5103]) References #1075: Change the release exporter to work with …
12:32 PM Changeset [5103] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
9:20 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5102]) References #1075: Change the release exporter to work with …
9:20 AM Changeset [5102] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
8:26 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5101]) References #1075: Change the release exporter to work with …
8:26 AM Changeset [5101] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …

Nov 15, 2018:

2:18 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5100]) References #1075: Change the release exporter to work with …
2:18 PM Changeset [5100] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
1:13 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5099]) References #1075: Change the release exporter to work with …
1:13 PM Changeset [5099] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
11:43 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5098]) References #1075: Change the release exporter to work with …
11:43 AM Changeset [5098] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
9:07 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5097]) References #1075: Change the release exporter to work with …
9:07 AM Changeset [5097] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …

Nov 14, 2018:

2:52 PM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5096]) References #1075: Change the release exporter to work with …
2:52 PM Changeset [5096] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
2:35 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5095]) Refs #1029. Updates needed for FFPE blocks in selection …
2:35 PM Changeset [5095] by olle
Refs #1029. Updates needed for FFPE blocks in selection menus to show …
2:19 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5094]) Refs #1029. MeLuDI updated with new configuration …
2:19 PM Changeset [5094] by olle
Refs #1029. MeLuDI updated with new configuration variables …
1:26 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5093]) Refs #1029. Basic support for Histology and H&E glass …
1:26 PM Changeset [5093] by olle
Refs #1029. Basic support for Histology and H&E glass items added. The …
12:05 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5092]) Refs #1029. Support for showing connected "chained" items …
12:05 PM Changeset [5092] by olle
Refs #1029. Support for showing connected "chained" items in Case …
10:46 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5091]) References #1075: Change the release exporter to work with …
10:46 AM Changeset [5091] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
9:22 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5090]) References #1075: Change the release exporter to work with …
9:22 AM Changeset [5090] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …
8:15 AM Ticket #1075 (Change the release exporter to work with list of patients) updated by Nicklas Nordborg
(In [5089]) References #1075: Change the release exporter to work with …
8:15 AM Changeset [5089] by Nicklas Nordborg
References #1075: Change the release exporter to work with list of …

Nov 13, 2018:

3:58 PM net.sf.basedb.reggie/notes421 created by Nicklas Nordborg
Adding update notes for Reggie 4.21
3:39 PM Ticket #1077 (All biosource items should have an external id (release id)) closed by Nicklas Nordborg
fixed: (In [5088]) Fixes #1077: All biosource items should have an external …
3:39 PM Changeset [5088] by Nicklas Nordborg
Fixes #1077: All biosource items should have an external id (release …
2:20 PM Ticket #1077 (All biosource items should have an external id (release id)) created by Nicklas Nordborg
Currently, among the Biosource item types it is only Patient items …
1:25 PM Ticket #1076 (The Level 3 export plug-in should generate rsync script with -L option) closed by Nicklas Nordborg
fixed: (In [5087]) Fixes #1076: The Level 3 export plug-in should generate …
1:25 PM Changeset [5087] by Nicklas Nordborg
Fixes #1076: The Level 3 export plug-in should generate rsync script …
1:12 PM Ticket #1076 (The Level 3 export plug-in should generate rsync script with -L option) created by Nicklas Nordborg
The current script only has -l option (implicit via -a) which …
10:22 AM Ticket #1075 (Change the release exporter to work with list of patients) created by Nicklas Nordborg
The current release exporter plug-in works with a list of raw …
10:17 AM Ticket #1074 (Add more subtypes) created by Nicklas Nordborg
The next release will start from the patient side and include other …

Nov 12, 2018:

11:21 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
(In [5086]) References #1072: Introduce Lysate item between RNA and …
11:21 AM Changeset [5086] by Nicklas Nordborg
References #1072: Introduce Lysate item between RNA and Specimen …
8:58 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
(In [5085]) References #1072: Introduce Lysate item between RNA and …
8:58 AM Changeset [5085] by Nicklas Nordborg
References #1072: Introduce Lysate item between RNA and Specimen …
8:31 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5084]) Refs #1029. FFPE section order form wizard updated to show …
8:31 AM Changeset [5084] by olle
Refs #1029. FFPE section order form wizard updated to show material …
7:56 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5083]) Refs #1029. FFPE section order form wizard updated when …
7:56 AM Changeset [5083] by olle
Refs #1029. FFPE section order form wizard updated when creating label …
7:49 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5082]) Refs #1029. FFPE section order form generation updated for …
7:49 AM Changeset [5082] by olle
Refs #1029. FFPE section order form generation updated for new PDF …

Nov 9, 2018:

11:11 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
(In [5081]) References #1072: Introduce Lysate item between RNA and …
11:11 AM Changeset [5081] by Nicklas Nordborg
References #1072: Introduce Lysate item between RNA and Specimen …
8:52 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
(In [5080]) References #1072: Introduce Lysate item between RNA and …
8:52 AM Changeset [5080] by Nicklas Nordborg
References #1072: Introduce Lysate item between RNA and Specimen …

Nov 8, 2018:

1:30 PM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
(In [5079]) References #1072: Introduce Lysate item between RNA and …
1:30 PM Changeset [5079] by Nicklas Nordborg
References #1072: Introduce Lysate item between RNA and Specimen The …
12:59 PM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
(In [5078]) References #1072: Introduce Lysate item between RNA and …
12:59 PM Changeset [5078] by Nicklas Nordborg
References #1072: Introduce Lysate item between RNA and Specimen The …

Nov 7, 2018:

1:12 PM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
(In [5077]) References #1072: Introduce Lysate item between RNA and …
1:12 PM Changeset [5077] by Nicklas Nordborg
References #1072: Introduce Lysate item between RNA and Specimen …
10:39 AM Ticket #1073 (Switch to BASE 3.13) closed by Nicklas Nordborg
fixed: (In [5076]) Fixes #1073: Switch to BASE 3.13
10:39 AM Changeset [5076] by Nicklas Nordborg
Fixes #1073: Switch to BASE 3.13
9:55 AM Ticket #1073 (Switch to BASE 3.13) created by Nicklas Nordborg
Since this is the current version.
9:52 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
Description changed
9:45 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) updated by Nicklas Nordborg
Status, Owner changed
9:43 AM Ticket #1072 (Introduce Lysate item between RNA and Specimen) created by Nicklas Nordborg
The existing structure has a direct link between RNA and Specimen. We …

Nov 6, 2018:

4:42 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5075]) Refs #1029. Annotation type Annotationtype.LOCALIZATION
4:42 PM Changeset [5075] by olle
Refs #1029. Annotation type Annotationtype.LOCALIZATION updated to …
8:59 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5074]) Refs #1029. FFPE block registration wizard updated for new …
8:59 AM Changeset [5074] by olle
Refs #1029. FFPE block registration wizard updated for new input …

Nov 5, 2018:

5:05 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
Design update: * As the result of discussions at the …
4:29 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5073]) Refs #1029. FFPE block registration wizard updated by …
4:29 PM Changeset [5073] by olle
Refs #1029. FFPE block registration wizard updated by fixing typo: …

Nov 1, 2018:

2:34 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5072]) Refs #1029. Updates due to version number change to …
2:34 PM Changeset [5072] by olle
Refs #1029. Updates due to version number change to "1.6.0-dev". …
2:10 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5071]) Refs #1029. Updates due to version number change to …
2:10 PM Changeset [5071] by olle
Refs #1029. Updates due to version number change to "1.6.0a9". 1. …
8:46 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5070]) Refs #1029. FFPE block order form wizard updated by …
8:46 AM Changeset [5070] by olle
Refs #1029. FFPE block order form wizard updated by renaming button …
8:37 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5069]) Refs #1029. FFPE section order form wizard updated to …
8:37 AM Changeset [5069] by olle
Refs #1029. FFPE section order form wizard updated to create label …

Oct 31, 2018:

9:03 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5068]) Refs #1029. Data access object file SpecimenTube.java in …
9:03 AM Changeset [5068] by olle
Refs #1029. Data access object file SpecimenTube.java in …
8:57 AM Changeset [5067] by Nicklas Nordborg
Changes for future release Reggie 4.21
8:55 AM Milestone Reggie v4.20 completed
See Reggie extension page for more information.
8:55 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 4.20 (diff)
8:53 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.20 (diff)
8:51 AM reggie-4.20.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.20
8:50 AM Ticket #1054 (Even more functionality in the Flagged alignment wizard) closed by Nicklas Nordborg
fixed
8:47 AM Changeset [5066] by Nicklas Nordborg
Tagging Reggie 4.20
8:47 AM Changeset [5065] by Nicklas Nordborg
Preparing to release Reggie 4.20
8:44 AM Ticket #1068 (Add mBAF analysis step to the Hisat/StringTie pipeline) updated by Nicklas Nordborg
(In [5064]) References #1068: Add mBAF analysis step to the …
8:44 AM Changeset [5064] by Nicklas Nordborg
References #1068: Add mBAF analysis step to the Hisat/StringTie
8:39 AM Ticket #1054 (Even more functionality in the Flagged alignment wizard) updated by Nicklas Nordborg
(In [5063]) References #1054: Even more functionality in the Flagged …
8:39 AM Changeset [5063] by Nicklas Nordborg
References #1054: Even more functionality in the Flagged alignment …
8:35 AM Ticket #1068 (Add mBAF analysis step to the Hisat/StringTie pipeline) updated by Nicklas Nordborg
Description changed
8:35 AM Ticket #1068 (Add mBAF analysis step to the Hisat/StringTie pipeline) closed by Nicklas Nordborg
fixed
8:33 AM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
Description changed

Oct 30, 2018:

2:58 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5062]) Refs #1029. First version of registration wizard for …
2:58 PM Changeset [5062] by olle
Refs #1029. First version of registration wizard for returned FFPE …
2:52 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
Design update: * The first version of the registration wizard for …
10:49 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5061]) Refs #1029. FFPE section block/section wizards updated for …
10:49 AM Changeset [5061] by olle
Refs #1029. FFPE section block/section wizards updated for new/changed …
9:53 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
Design update: * Annotations for keeping track of where in the …

Oct 29, 2018:

4:57 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5060]) Refs #1029. First version of FFPE section (specimen) …
4:57 PM Changeset [5060] by olle
Refs #1029. First version of FFPE section (specimen) registration …
4:16 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
Design update: * The first version of the FFPE section registration …
11:11 AM Ticket #1067 (Highlight related items in Case summary) closed by Nicklas Nordborg
fixed
11:11 AM Ticket #1067 (Highlight related items in Case summary) updated by Nicklas Nordborg
(In [5059]) References #1067: Highlight related items in Case summary …
11:11 AM Changeset [5059] by Nicklas Nordborg
References #1067: Highlight related items in Case summary Do not …
10:45 AM Ticket #1070 (The consent registration wizard doesn't check existing consent) closed by Nicklas Nordborg
fixed: (In [5058]) Fixes #1070: The consent registration wizard doesn't check …
10:45 AM Changeset [5058] by Nicklas Nordborg
Fixes #1070: The consent registration wizard doesn't check existing consent
9:01 AM Ticket #1070 (The consent registration wizard doesn't check existing consent) updated by Nicklas Nordborg
Status changed
9:00 AM Ticket #1068 (Add mBAF analysis step to the Hisat/StringTie pipeline) updated by Nicklas Nordborg
Status, Milestone changed
8:26 AM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5057]) References #1058: Add mBAF analysis step to the …
8:26 AM Changeset [5057] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie

Oct 26, 2018:

12:53 PM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5056]) References #1058: Add mBAF analysis step to the …
12:53 PM Changeset [5056] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie
9:39 AM Changeset [5055] by Nicklas Nordborg
9:35 AM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5054]) References #1058: Add mBAF analysis step to the …
9:35 AM Changeset [5054] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie
8:19 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5053]) Refs #1029. FFPE section order form updated for "Yellow …
8:19 AM Changeset [5053] by olle
Refs #1029. FFPE section order form updated for "Yellow label" FFPE …

Oct 25, 2018:

4:52 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
Design update for FFPE section order form: 1. The FFPE section order …
3:05 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5052]) Refs #1029. FFPE section order form wizard updated to keep …
3:05 PM Changeset [5052] by olle
Refs #1029. FFPE section order form wizard updated to keep track of …
1:23 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
Design update for FFPE section order form: 1. A new Boolean …

Oct 24, 2018:

1:24 PM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5051]) References #1058: Add mBAF analysis step to the …
1:24 PM Changeset [5051] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie
8:21 AM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5050]) References #1058: Add mBAF analysis step to the …
8:21 AM Changeset [5050] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie

Oct 23, 2018:

3:04 PM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5049]) References #1058: Add mBAF analysis step to the …
3:04 PM Changeset [5049] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie

Oct 22, 2018:

5:00 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5048]) Refs #1029. FFPE section order form wizard updated to show …
5:00 PM Changeset [5048] by olle
Refs #1029. FFPE section order form wizard updated to show PAD number …
1:09 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by olle
(In [5047]) Refs #1029. FFPE block registration wizard updated by …
1:09 PM Changeset [5047] by olle
Refs #1029. FFPE block registration wizard updated by fixing bug in …
11:21 AM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5046]) References #1058: Add mBAF analysis step to the …
11:21 AM Changeset [5046] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie
9:16 AM Ticket #1058 (The "Download labels" button in the DNA/RNA/FlowThrough registration ...) updated by Nicklas Nordborg
(In [5045]) References #1058: Add mBAF analysis step to the …
9:16 AM Changeset [5045] by Nicklas Nordborg
References #1058: Add mBAF analysis step to the Hisat/StringTie
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