Timeline
Nov 27, 2017:
- 9:59 AM Ticket #1009 (Genotype quality control wizard) created by
- Since #1001 we are creating a VCF file with genotypes for 51 SNPs. A …
- 9:31 AM Ticket #1008 (The release exporter should be able to export expression data from the ...) updated by
- (In [4641]) References #1008: The release exporter should be able to …
- 9:31 AM Changeset [4641] by
- References #1008: The release exporter should be able to export …
- 8:28 AM Ticket #1008 (The release exporter should be able to export expression data from the ...) updated by
-
Milestone changed
Nov 23, 2017:
- 9:04 AM Ticket #1008 (The release exporter should be able to export expression data from the ...) updated by
-
Milestone changed
- 8:55 AM Changeset [4640] by
- Changes for future release Relax 1.2
- 8:55 AM Changeset [4639] by
- Changes for future release Reggie 4.14
- 8:53 AM Milestone Relax v1.1 completed
- See Relax extension page for more information.
- 8:53 AM PluginDownload edited by
- Released Relax 1.1 (diff)
- 8:52 AM net.sf.basedb.relax edited by
- Released Relax 1.1 (diff)
- 8:49 AM Changeset [4638] by
- Tagging Relax 1.1
- 8:48 AM Changeset [4637] by
- Preparing to release Relax 1.1
- 8:40 AM net.sf.basedb.reggie/HistoryOfReggie edited by
- Released Reggie 4.13 (diff)
- 8:31 AM Milestone Reggie v4.13 completed
- See Reggie extension page for more information.
- 8:30 AM PluginDownload edited by
- Released Reggie 4.13 (diff)
- 8:29 AM net.sf.basedb.reggie edited by
- Released Reggie 4.13 (diff)
- 8:27 AM net.sf.basedb.reggie/notes413 edited by
- (diff)
- 8:19 AM Changeset [4636] by
- Tagging Reggie 4.13
- 8:18 AM Changeset [4635] by
- Preparing to release Reggie 4.13
- 8:15 AM Tickets #994,987,1006 batch updated by
- fixed
- 8:15 AM Tickets #1001,1005 batch updated by
- fixed
Nov 22, 2017:
- 2:12 PM Ticket #1006 (External data filtering and mapping wizard) updated by
- (In [4634]) References #1006: External data filtering and mapping …
- 2:12 PM Changeset [4634] by
- References #1006: External data filtering and mapping wizard It …
- 2:08 PM Ticket #1005 (External data filtering and mapping wizard) updated by
- (In [4633]) References #1005: External data filtering and mapping …
- 2:08 PM Changeset [4633] by
- References #1005: External data filtering and mapping wizard Cleaning …
- 1:45 PM Ticket #1006 (External data filtering and mapping wizard) updated by
- (In [4632]) References #1006: External data filtering and mapping …
- 1:45 PM Changeset [4632] by
- References #1006: External data filtering and mapping wizard Added …
- 10:58 AM Ticket #1005 (External data filtering and mapping wizard) updated by
-
Milestone changed
Nov 21, 2017:
- 2:35 PM Ticket #1006 (External data filtering and mapping wizard) updated by
- (In [4631]) References #1006: External data filtering and mapping …
- 2:35 PM Changeset [4631] by
- References #1006: External data filtering and mapping wizard Moving …
- 11:29 AM Ticket #1006 (External data filtering and mapping wizard) updated by
- (In [4630]) References #1006: External data filtering and mapping …
- 11:29 AM Changeset [4630] by
- References #1006: External data filtering and mapping wizard …
- 11:26 AM Ticket #1006 (External data filtering and mapping wizard) updated by
-
Status, Owner, Milestone changed
- 9:28 AM Ticket #994 (Level 3 exporter) updated by
- (In [4629]) References #994: Level 3 exporter Removed debug code (the …
- 9:28 AM Changeset [4629] by
- References #994: Level 3 exporter Removed debug code (the plug-in …
- 9:27 AM Ticket #987 (Cohort exporter plugin) updated by
- (In [4628]) References #987: Cohort exporter plugin Removed debug …
- 9:27 AM Changeset [4628] by
- References #987: Cohort exporter plugin Removed debug code (the …
- 9:09 AM Ticket #1005 (External data filtering and mapping wizard) updated by
- (In [4627]) References #1005: External data filtering and mapping …
- 9:09 AM Changeset [4627] by
- References #1005: External data filtering and mapping wizard Added a …
Nov 17, 2017:
- 2:22 PM Ticket #1008 (The release exporter should be able to export expression data from the ...) created by
- Since #984 data from the cufflinks file are no longer imported to the …
- 2:08 PM Ticket #1007 (The release exporter should sort raw bioassay by external id when the ...) closed by
- fixed: (In [4626]) Fixes #1007: The release exporter should sort raw bioassay …
- 2:08 PM Changeset [4626] by
- Fixes #1007: The release exporter should sort raw bioassay by external …
- 12:38 PM Ticket #1002 (The release exporter should ignore directories and files that it has ...) closed by
- fixed: (In [4625]) Fixes #1002: The release exporter should ignore …
- 12:38 PM Changeset [4625] by
- Fixes #1002: The release exporter should ignore directories and files …
- 11:05 AM Ticket #1007 (The release exporter should sort raw bioassay by external id when the ...) created by
- The raw bioassays to export are usually sorted by name in all files. …
- 10:41 AM Ticket #1003 (Add support for disabling/pausing a pipeline) closed by
- fixed: (In [4624]) Fixes #1003: Add support for disabling/pausing a pipeline …
- 10:41 AM Changeset [4624] by
- Fixes #1003: Add support for disabling/pausing a pipeline The Hisat …
- 7:50 AM Ticket #1002 (The release exporter should ignore directories and files that it has ...) updated by
-
Status changed
- 7:50 AM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
-
Status changed
- 7:49 AM Ticket #1003 (Add support for disabling/pausing a pipeline) updated by
-
Status changed
- 7:49 AM Ticket #1004 (Auto-confirmation after demux should start Tophat/Hisat jobs ...) closed by
- fixed: (In [4623]) Fixes #1004: Auto-confirmation after demux should start …
- 7:49 AM Changeset [4623] by
- Fixes #1004: Auto-confirmation after demux should start Tophat/Hisat …
Nov 16, 2017:
- 1:48 PM Ticket #1004 (Auto-confirmation after demux should start Tophat/Hisat jobs ...) updated by
-
Status changed
- 1:18 PM Ticket #1005 (External data filtering and mapping wizard) updated by
-
Description, Summary changed
- 1:17 PM Ticket #1006 (External data filtering and mapping wizard) created by
- See for more information #1005. The file that is created by the …
- 1:14 PM Ticket #1005 (External data filtering and mapping wizard) created by
- The use case is that we have a text file with some kind of personal …
- 12:58 PM Ticket #1004 (Auto-confirmation after demux should start Tophat/Hisat jobs ...) created by
-
The
DemuxAutoConfirmercode that starts Tophat and Hisat alignment … - 12:54 PM Ticket #1003 (Add support for disabling/pausing a pipeline) created by
- This is mainly for auto-confirmation purposes. It would be useful to …
- 12:47 PM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
- (In [4622]) References #1001: Add HaplotypeCaller to Hisat align step …
- 12:47 PM Changeset [4622] by
- References #1001: Add HaplotypeCaller to Hisat align step VCF …
- 11:08 AM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
- (In [4621]) References #1001: Add HaplotypeCaller to Hisat align step …
- 11:08 AM Changeset [4621] by
- References #1001: Add HaplotypeCaller to Hisat align step Add …
- 8:10 AM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
- (In [4620]) References #1001: Add HaplotypeCaller to Hisat align step …
- 8:10 AM Changeset [4620] by
- References #1001: Add HaplotypeCaller to Hisat align step Added …
Nov 13, 2017:
- 2:41 PM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
- (In [4619]) References #1001: Add HaplotypeCaller to Hisat align step …
- 2:41 PM Changeset [4619] by
- References #1001: Add HaplotypeCaller to Hisat align step Added VCF …
- 12:41 PM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
- (In [4618]) References #1001: Add HaplotypeCaller to Hisat align step …
- 12:41 PM Changeset [4618] by
- References #1001: Add HaplotypeCaller to Hisat align step The VCF …
- 11:53 AM net.sf.basedb.reggie/notes413 created by
- Create update notes for Reggie 4.13
- 11:06 AM Ticket #1002 (The release exporter should ignore directories and files that it has ...) updated by
-
Description changed
- 10:17 AM Ticket #1002 (The release exporter should ignore directories and files that it has ...) updated by
-
Description changed
- 10:14 AM Ticket #1002 (The release exporter should ignore directories and files that it has ...) created by
- The release exporter is creating scripts for lining data files to …
Nov 10, 2017:
- 9:16 AM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
-
Description changed
- 9:16 AM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
-
Description changed
- 9:08 AM Ticket #1001 (Add HaplotypeCaller to Hisat align step) updated by
-
Description changed
- 9:03 AM Ticket #1001 (Add HaplotypeCaller to Hisat align step) created by
- In the Hisat alignment pipeline we should also run HaplotypeCaller to …
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