Timeline



Oct 3, 2017:

1:31 PM reggie-4.12-dev.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.12-dev
1:24 PM Changeset [4614] by Nicklas Nordborg
Tagging Relax 1.1-beta-2 (second try)
1:24 PM Changeset [4613] by Nicklas Nordborg
References #994: Level 3 exporter More missing files that should have …
1:23 PM Changeset [4612] by Nicklas Nordborg
Deleting tag since it was missing required files.
1:21 PM Changeset [4611] by Nicklas Nordborg
Tagging Relax 1.1-beta-2
1:21 PM Changeset [4610] by Nicklas Nordborg
Preparing to release Relax 1.1-beta-2
1:17 PM Changeset [4609] by Nicklas Nordborg
Adding JDOM which is required by changes in [4608].
1:15 PM Changeset [4608] by Nicklas Nordborg
References #994: Level 3 exporter Added a configuration file for …
12:57 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Prepared for Reggie 4.12 (diff)
12:51 PM Changeset [4607] by Nicklas Nordborg
Merging Reggie 4.11.3 to the trunk.
12:49 PM Milestone Reggie v4.11.3 completed
12:48 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.11.3 (diff)
12:47 PM reggie-4.11.3.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.11.3
12:46 PM Changeset [4606] by Nicklas Nordborg
Tagging Reggie 4.11.3
12:45 PM Changeset [4605] by Nicklas Nordborg
Preparing to release Reggie 4.11.3
12:02 PM net.sf.basedb.reggie/notes412 edited by Nicklas Nordborg
Added note about configuration changes (diff)

Oct 2, 2017:

1:51 PM Ticket #1000 (The release exporter should be able to export more raw bioassay annotations) closed by Nicklas Nordborg
fixed: (In [4604]) Fixes #1000: The release exporter should be able to export …
1:51 PM Changeset [4604] by Nicklas Nordborg
Fixes #1000: The release exporter should be able to export more raw …
10:49 AM Ticket #1000 (The release exporter should be able to export more raw bioassay annotations) created by Nicklas Nordborg
By creating an annotation type category (for example, GEX_Release) and …
10:32 AM Changeset [4603] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Added …
9:07 AM net.sf.basedb.reggie/notes412 created by Nicklas Nordborg
Update notes for Reggie 4.12

Sep 29, 2017:

2:19 PM Changeset [4602] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Added …
11:21 AM Changeset [4601] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Updated …

Sep 28, 2017:

2:34 PM Changeset [4600] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Added …
11:42 AM Changeset [4599] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline The …

Sep 27, 2017:

3:20 PM Changeset [4598] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Items are …
2:48 PM Changeset [4597] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline The …
12:58 PM Changeset [4596] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Added …
11:03 AM Changeset [4595] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Added a …

Sep 26, 2017:

2:20 PM Changeset [4594] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Started to …
12:46 PM Changeset [4593] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Creating …
9:45 AM Changeset [4592] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Removed …
8:28 AM Changeset [4591] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Samtools …

Sep 25, 2017:

2:58 PM Changeset [4590] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Added …
2:34 PM Changeset [4589] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Updated …
1:40 PM Changeset [4588] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Adding a …
1:38 PM Changeset [4587] by Nicklas Nordborg
References #997: Implement new secondary analysis pipeline Adding …

Sep 22, 2017:

1:34 PM Ticket #999 (Release exporter need to match Histology item based on partition date) closed by Nicklas Nordborg
fixed: (In [4586]) Fixes #999: Release exporter need to match Histology item …
1:34 PM Changeset [4586] by Nicklas Nordborg
Fixes #999: Release exporter need to match Histology item based on …
8:58 AM Changeset [4585] by Nicklas Nordborg
References #998: Fix problems with unselected list items Applying …
8:41 AM Changeset [4584] by Nicklas Nordborg
Creating bugfix branch for Reggie 4.11 (based on tags/4.11.2).
8:39 AM Ticket #999 (Release exporter need to match Histology item based on partition date) created by Nicklas Nordborg
If a specimen has been partitioned twice with two Lysate and two …

Sep 21, 2017:

2:23 PM Ticket #998 (Fix problems with unselected list items) closed by Nicklas Nordborg
fixed: (In [4583]) Fixes #998: Fix problems with unselected list items The …
2:23 PM Changeset [4583] by Nicklas Nordborg
Fixes #998: Fix problems with unselected list items The problem was …
10:54 AM Ticket #998 (Fix problems with unselected list items) created by Nicklas Nordborg
See http://base.thep.lu.se/ticket/2096 for some background information …

Sep 20, 2017:

10:59 AM Ticket #997 (Implement new secondary analysis pipeline) created by Nicklas Nordborg
The new secondary analysis pipeline should be implemented. It starts …
10:24 AM Changeset [4582] by Nicklas Nordborg
Preparing for future release Reggie 4.12
10:22 AM Milestone Reggie v4.11.2 completed
10:22 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.11.2 (diff)
10:20 AM reggie-4.11.2.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.11.2
10:18 AM Changeset [4581] by Nicklas Nordborg
Tagging Reggie 4.11.2
10:17 AM Changeset [4580] by Nicklas Nordborg
Preparing to release Reggie 4.11.2
10:12 AM Changeset [4579] by Nicklas Nordborg
References #994: Level 3 exporter The exporter no longer include …

Sep 19, 2017:

2:38 PM Changeset [4578] by Nicklas Nordborg
References #994: Level 3 exporter Adding Level3Archive file server …
2:11 PM Changeset [4577] by Nicklas Nordborg
References #994: Level 3 exporter Bash scripts for creating the …

Sep 18, 2017:

11:26 AM Changeset [4576] by Nicklas Nordborg
References #994: Level 3 exporter Creating and exporting some …

Sep 15, 2017:

2:17 PM Changeset [4575] by Nicklas Nordborg
References #994: Level 3 exporter FPKM file information is now …
1:26 PM Ticket #996 (The project archive service is running to often) closed by Nicklas Nordborg
fixed: (In [4574]) Fixes #996: The project archive service is running to often
1:26 PM Changeset [4574] by Nicklas Nordborg
Fixes #996: The project archive service is running to often
1:26 PM Ticket #995 (Project archive files are lacking access permission) closed by Nicklas Nordborg
fixed: (In [4573]) Fixes #995: Project archive files are lacking access permission
1:26 PM Changeset [4573] by Nicklas Nordborg
Fixes #995: Project archive files are lacking access permission
11:48 AM Ticket #996 (The project archive service is running to often) created by Nicklas Nordborg
The project archive service (#864) is responsible for setting access …
11:21 AM Ticket #995 (Project archive files are lacking access permission) created by Nicklas Nordborg
The background service that is responsible for setting access …
8:42 AM Changeset [4572] by Nicklas Nordborg
References #994: Level 3 exporter The DataFilesFolder annotation is …

Sep 14, 2017:

1:49 PM Changeset [4571] by Nicklas Nordborg
References #994: Level 3 exporter Started to implement the level 3 …
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