Timeline



May 20, 2016:

1:20 PM Changeset [3966] by Nicklas Nordborg
Changes for future release IncaXml2Csv 1.1
1:19 PM Milestone INCA XML to CSV converter 1.0 completed
See INCA XML to CSV converter page for more …
1:19 PM Ticket #881 (Implement INCA XML to CSV converter) closed by Nicklas Nordborg
fixed
1:18 PM net.sf.basedb.inca edited by Nicklas Nordborg
(diff)
1:17 PM net.sf.basedb.inca edited by Nicklas Nordborg
Released IncaXml2Csv 1.0 (diff)
1:13 PM IncaXml2Csv-1.0.tar.gz attached to net.sf.basedb.inca by Nicklas Nordborg
IncaXml2Csv 1.0
1:11 PM Changeset [3965] by Nicklas Nordborg
Tagging IncaXml2Csv 1.0
1:10 PM Changeset [3964] by Nicklas Nordborg
Preparing to release IncaXml2Csv 1.0.
12:28 PM Ticket #888 (INCA statistics) updated by olle
(In [3963]) Refs #888. First (experimental) version of INCA …
12:28 PM Changeset [3963] by olle
Refs #888. First (experimental) version of INCA statistics. It allows …
11:06 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3962]) References #887: Release export wizard Progress reporter …
11:06 AM Changeset [3962] by Nicklas Nordborg
References #887: Release export wizard Progress reporter for the …
11:04 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3961]) References #887: Release export wizard The exporter now …
11:04 AM Changeset [3961] by Nicklas Nordborg
References #887: Release export wizard The exporter now uses the new …
10:58 AM Ticket #888 (INCA statistics) updated by olle
Design discussion: * As the details on entry selection and report …
10:58 AM Ticket #889 (Switch to BASE 3.9) closed by Nicklas Nordborg
fixed: (In [3960]) Fixes #889: Switch to BASE 3.9
10:58 AM Changeset [3960] by Nicklas Nordborg
Fixes #889: Switch to BASE 3.9
9:37 AM Ticket #889 (Switch to BASE 3.9) created by Nicklas Nordborg
This is required for #887 which need http://base.thep.lu.se/ticket/2004.
9:23 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3959]) References #887: Release export wizard Parent.items
9:23 AM Changeset [3959] by Nicklas Nordborg
References #887: Release export wizard Parent.items column in the …
9:00 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3958]) References #887: Release export wizard Added exporter for …
9:00 AM Changeset [3958] by Nicklas Nordborg
References #887: Release export wizard Added exporter for the …

May 19, 2016:

2:56 PM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3957]) References #887: Release export wizard Implemented a new …
2:56 PM Changeset [3957] by Nicklas Nordborg
References #887: Release export wizard Implemented a new strategy for …
11:34 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3956]) References #887: Release export wizard Changed the …
11:34 AM Changeset [3956] by Nicklas Nordborg
References #887: Release export wizard Changed the …
9:04 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3955]) References #887: Release export wizard Re-factored the …
9:04 AM Changeset [3955] by Nicklas Nordborg
References #887: Release export wizard Re-factored the code for …
8:00 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
7:57 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3954]) References #887: Release export wizard Added …
7:57 AM Changeset [3954] by Nicklas Nordborg
References #887: Release export wizard Added GeneSymbolInfo for …

May 18, 2016:

1:12 PM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3953]) References #887: Release export wizard Re-factored the …
1:12 PM Changeset [3953] by Nicklas Nordborg
References #887: Release export wizard Re-factored the array design …
11:55 AM Ticket #888 (INCA statistics) updated by olle
(In [3952]) Refs #888. INCA servlet for INCA import updated by fixing …
11:55 AM Changeset [3952] by olle
Refs #888. INCA servlet for INCA import updated by fixing typo in …
11:33 AM Ticket #888 (INCA statistics) updated by olle
(In [3951]) Refs #888. INCA servlet for INCA import refactored …
11:33 AM Changeset [3951] by olle
Refs #888. INCA servlet for INCA import refactored regarding creation …
9:11 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
9:08 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
I have made some tests with different strategies for loading the raw …
8:41 AM no-join-order-by-internal-id.png attached to Ticket #887 by Nicklas Nordborg
No join sort by internal reporter id
8:41 AM join-order-by-internal-id.png attached to Ticket #887 by Nicklas Nordborg
Join and sort by internal reporter id
8:40 AM join-order-by-external-id.png attached to Ticket #887 by Nicklas Nordborg
Sort by external reporter id
8:27 AM Ticket #888 (INCA statistics) updated by olle
(In [3950]) Refs #888. INCA servlet for INCA import refactored in …
8:27 AM Changeset [3950] by olle
Refs #888. INCA servlet for INCA import refactored in progress …

May 17, 2016:

4:53 PM Ticket #888 (INCA statistics) updated by olle
(In [3949]) Refs #888. INCA servlet for INCA import refactored as …
4:53 PM Changeset [3949] by olle
Refs #888. INCA servlet for INCA import refactored as preparation for …
4:20 PM Ticket #888 (INCA statistics) updated by olle
Design discussion: Much functionality needed for INCA statistics have …
2:50 PM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3948]) References #887: Release export wizard Implemented …
2:50 PM Changeset [3948] by Nicklas Nordborg
References #887: Release export wizard Implemented exporter for the …
11:49 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3947]) References #887: Release export wizard Added INCA …
11:49 AM Changeset [3947] by Nicklas Nordborg
References #887: Release export wizard Added INCA information to the …
11:43 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3946]) References #887: Release export wizard Added merged, …
11:43 AM Changeset [3946] by Nicklas Nordborg
References #887: Release export wizard Added merged, masked, aligned …
11:36 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
11:24 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3945]) References #887: Release export wizard Added lysate, RNA …
11:24 AM Changeset [3945] by Nicklas Nordborg
References #887: Release export wizard Added lysate, RNA and library …
11:10 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3944]) References #887: Release export wizard Added specimen and …
11:10 AM Changeset [3944] by Nicklas Nordborg
References #887: Release export wizard Added specimen and stained …
10:10 AM summary_columns.txt attached to Ticket #887 by Nicklas Nordborg
Columns in the cohortSummary.txt
10:09 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
9:40 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3943]) References #887: Release export wizard Started to …
9:40 AM Changeset [3943] by Nicklas Nordborg
References #887: Release export wizard Started to implement the …

May 16, 2016:

1:14 PM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3942]) References #887: Release export wizard Added exporter for …
1:14 PM Changeset [3942] by Nicklas Nordborg
References #887: Release export wizard Added exporter for the INCA …
11:47 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3941]) References #887: Release export wizard Added exporter for …
11:47 AM Changeset [3941] by Nicklas Nordborg
References #887: Release export wizard Added exporter for the Stained …
11:46 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
11:04 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
10:58 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3940]) References #887: Release export wizard Added exporters …
10:58 AM Changeset [3940] by Nicklas Nordborg
References #887: Release export wizard Added exporters for case and …
9:50 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
9:41 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3939]) References #887: Release export wizard Added exporters …
9:41 AM Changeset [3939] by Nicklas Nordborg
References #887: Release export wizard Added exporters for lysate and …
9:18 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3938]) References #887: Release export wizard Set character set …
9:18 AM Changeset [3938] by Nicklas Nordborg
References #887: Release export wizard Set character set (UTF-8) …
9:01 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
8:42 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3937]) References #887: Release export wizard Added exporters …
8:42 AM Changeset [3937] by Nicklas Nordborg
References #887: Release export wizard Added exporters for library …
8:29 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3936]) References #887: Release export wizard Added exporters …
8:29 AM Changeset [3936] by Nicklas Nordborg
References #887: Release export wizard Added exporters for aligned, …

May 13, 2016:

3:12 PM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3935]) References #887: Release export wizard Started with the …
3:12 PM Changeset [3935] by Nicklas Nordborg
References #887: Release export wizard Started with the cohort …
9:24 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3934]) References #887: Release export wizard Implemented …
9:24 AM Changeset [3934] by Nicklas Nordborg
References #887: Release export wizard Implemented exporter for th …
9:02 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3933]) References #887: Release export wizard Implemented …
9:02 AM Changeset [3933] by Nicklas Nordborg
References #887: Release export wizard Implemented exporter for the …
8:14 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
(In [3932]) References #887: Release export wizard Created the …
8:14 AM Changeset [3932] by Nicklas Nordborg
References #887: Release export wizard Created the exporter plug-in …

May 12, 2016:

3:42 PM Ticket #888 (INCA statistics) updated by olle
Design note: * INCA file header columns to be used for filtering and …
1:44 PM Tickets #887,​888 batch updated by Nicklas Nordborg
Milestone changed
1:43 PM Changeset [3931] by Nicklas Nordborg
Changes for future release Reggie 4.5
1:42 PM Milestone Reggie v4.4 completed
See Reggie extension page for more information.
1:41 PM PluginDownload edited by Nicklas Nordborg
Released Reggie 4.4 (diff)
1:41 PM Ticket #883 (Add support for progress reporting to the Reggie wizard API) closed by Nicklas Nordborg
fixed
1:40 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.4 (diff)
1:34 PM reggie-4.4.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.4
1:32 PM Changeset [3930] by Nicklas Nordborg
Tagging Reggie 4.4
1:31 PM Changeset [3929] by Nicklas Nordborg
Preparing to release Reggie 4.4.
1:10 PM Ticket #525 (Import data from INCA) closed by olle
fixed: Ticket closed as first version of INCA importer has been implemented.
1:07 PM Ticket #525 (Import data from INCA) updated by olle
(In [3928]) Refs #525. INCA importer updated in preparation for …
1:07 PM Changeset [3928] by olle
Refs #525. INCA importer updated in preparation for release of first …
10:56 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
8:05 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
8:04 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed

May 11, 2016:

3:03 PM Ticket #525 (Import data from INCA) updated by olle
(In [3927]) Refs #525. INCA importer updated in method creating INCA …
3:03 PM Changeset [3927] by olle
Refs #525. INCA importer updated in method creating INCA import report …
2:43 PM Ticket #888 (INCA statistics) updated by olle
Traceability note: * Creation of a csv file to be used when …
2:38 PM Ticket #888 (INCA statistics) updated by olle
Status changed
Ticket accepted.
2:36 PM Ticket #888 (INCA statistics) updated by olle
Owner changed
Ticket reassigned to "olle".
2:36 PM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
2:35 PM Ticket #888 (INCA statistics) created by olle
Statistics should be calculated from the data obtained from INCA at …
2:00 PM Ticket #525 (Import data from INCA) updated by olle
(In [3926]) Refs #525. INCA importer updated by removing or commenting …
2:00 PM Changeset [3926] by olle
Refs #525. INCA importer updated by removing or commenting out debug …
8:45 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Status changed
8:45 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed

May 10, 2016:

4:59 PM Ticket #525 (Import data from INCA) updated by olle
(In [3925]) Refs #525. INCA importer updated to only use a single …
4:59 PM Changeset [3925] by olle
Refs #525. INCA importer updated to only use a single *.csv file for …
2:20 PM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
For efficient calculations it is desirable to process the data gene …
12:03 PM Ticket #525 (Import data from INCA) updated by olle
(In [3924]) Refs #525. INCA importer updated in JSP file to only allow …
12:03 PM Changeset [3924] by olle
Refs #525. INCA importer updated in JSP file to only allow a single …

May 9, 2016:

11:36 AM Ticket #887 (Release export wizard) updated by Nicklas Nordborg
Description changed
9:31 AM Ticket #887 (Release export wizard) created by Nicklas Nordborg
Implement a wizard for creating all files that should be included in a …

May 4, 2016:

2:41 PM Ticket #525 (Import data from INCA) updated by olle
(In [3923]) Refs #525. INCA importer updated to no longer replace tabs …
2:41 PM Changeset [3923] by olle
Refs #525. INCA importer updated to no longer replace tabs with spaces …
2:35 PM Ticket #525 (Import data from INCA) updated by olle
Design discussion: * The functionality added in change set …
8:48 AM Ticket #525 (Import data from INCA) updated by olle
(In [3922]) Refs #525. INCA importer updated in progress reporter to …
8:48 AM Changeset [3922] by olle
Refs #525. INCA importer updated in progress reporter to report …

May 3, 2016:

4:57 PM Ticket #525 (Import data from INCA) updated by olle
(In [3921]) Refs #525. INCA importer updated in progress reporter to …
4:57 PM Changeset [3921] by olle
Refs #525. INCA importer updated in progress reporter to report …
1:58 PM Ticket #525 (Import data from INCA) updated by olle
(In [3920]) Refs #525. INCA importer updated to use progress reporter: …
1:58 PM Changeset [3920] by olle
Refs #525. INCA importer updated to use progress reporter: 1. JSP …
1:57 PM Ticket #886 (Add thousand separator to counter on Reggie start page) closed by Nicklas Nordborg
fixed: (In [3919]) Fixes #886: Add thousand separator to counter on Reggie …
1:57 PM Changeset [3919] by Nicklas Nordborg
Fixes #886: Add thousand separator to counter on Reggie start page
1:57 PM Ticket #886 (Add thousand separator to counter on Reggie start page) created by Nicklas Nordborg
It looks better and is more readable when the numbers get large.
1:56 PM Ticket #525 (Import data from INCA) updated by olle
Design update: * Reggie API has been updated with support for a …
9:36 AM Ticket #885 (The ProjectArchive permission checker should use smaller batches with ...) closed by Nicklas Nordborg
fixed: (In [3918]) Fixes #885: The ProjectArchive permission checker should …
9:36 AM Changeset [3918] by Nicklas Nordborg
Fixes #885: The ProjectArchive permission checker should use smaller …
8:13 AM Ticket #885 (The ProjectArchive permission checker should use smaller batches with ...) created by Nicklas Nordborg
The current implementation will search for all files with incorrect …

May 2, 2016:

4:33 PM Ticket #525 (Import data from INCA) updated by olle
(In [3917]) Refs #525. INCA importer updated by using a sample query …
4:33 PM Changeset [3917] by olle
Refs #525. INCA importer updated by using a sample query to obtain …
1:41 PM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3916]) References #883: Add support for progress reporting to the …
1:41 PM Changeset [3916] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …
1:27 PM Ticket #525 (Import data from INCA) updated by olle
(In [3915]) Refs #525. INCA importer updated by refactoring database …
1:27 PM Changeset [3915] by olle
Refs #525. INCA importer updated by refactoring database mapping and …
1:09 PM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3914]) References #883: Add support for progress reporting to the …
1:09 PM Changeset [3914] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …
9:56 AM Ticket #884 (Check timeouts for SSH commands) closed by Nicklas Nordborg
fixed: (In [3913]) Fixes #884: Check timeouts for SSH commands Should be …
9:56 AM Changeset [3913] by Nicklas Nordborg
Fixes #884: Check timeouts for SSH commands Should be better now. 5 …
9:22 AM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3912]) References #883: Add support for progress reporting to the …
9:22 AM Changeset [3912] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …
9:20 AM Ticket #884 (Check timeouts for SSH commands) created by Nicklas Nordborg
I think we need to check how SSH commands are handled with respect to …
8:51 AM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3911]) References #883: Add support for progress reporting to the …
8:51 AM Changeset [3911] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …

Apr 29, 2016:

4:52 PM Ticket #525 (Import data from INCA) updated by olle
(In [3910]) Refs #525. INCA importer updated by refactoring internal …
4:52 PM Changeset [3910] by olle
Refs #525. INCA importer updated by refactoring internal laterality …
3:47 PM Ticket #525 (Import data from INCA) updated by olle
(In [3909]) Refs #525. INCA importer updated by removing unused or …
3:47 PM Changeset [3909] by olle
Refs #525. INCA importer updated by removing unused or redundant …
2:33 PM Ticket #525 (Import data from INCA) updated by olle
(In [3908]) Refs #525. INCA importer updated by refactoring collection …
2:33 PM Changeset [3908] by olle
Refs #525. INCA importer updated by refactoring collection of …
2:24 PM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3907]) References #883: Add support for progress reporting to the …
2:24 PM Changeset [3907] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …
2:22 PM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3906]) References #883: Add support for progress reporting to the …
2:22 PM Changeset [3906] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …
1:20 PM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3905]) References #883: Add support for progress reporting to the …
1:20 PM Changeset [3905] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …
12:53 PM Ticket #883 (Add support for progress reporting to the Reggie wizard API) updated by Nicklas Nordborg
(In [3904]) References #883: Add support for progress reporting to the …
12:53 PM Changeset [3904] by Nicklas Nordborg
References #883: Add support for progress reporting to the Reggie …
12:20 PM Ticket #525 (Import data from INCA) updated by olle
(In [3903]) Refs #525. INCA importer updated by refactoring finding …
12:20 PM Changeset [3903] by olle
Refs #525. INCA importer updated by refactoring finding key column …
11:57 AM Ticket #883 (Add support for progress reporting to the Reggie wizard API) created by Nicklas Nordborg
There are a few Reggie wizards that takes some time to complete. It …
11:49 AM Ticket #525 (Import data from INCA) updated by olle
(In [3902]) Refs #525. INCA importer updated by removing unused …
11:49 AM Changeset [3902] by olle
Refs #525. INCA importer updated by removing unused variable …
11:20 AM Ticket #525 (Import data from INCA) updated by olle
(In [3901]) Refs #525. INCA importer updated by refactoring mapping of …
11:20 AM Changeset [3901] by olle
Refs #525. INCA importer updated by refactoring mapping of personal …
10:04 AM Ticket #525 (Import data from INCA) updated by olle
(In [3900]) Refs #525. INCA importer updated by refactoring file …
10:04 AM Changeset [3900] by olle
Refs #525. INCA importer updated by refactoring file upload: 1. Java …
8:10 AM Ticket #882 (It is not possible for a user with PatientCurator role to use the ...) closed by Nicklas Nordborg
fixed: (In [3899]) Fixes #882: It is not possible for a user with …
8:10 AM Changeset [3899] by Nicklas Nordborg
Fixes #882: It is not possible for a user with PatientCurator role to …
8:06 AM Ticket #882 (It is not possible for a user with PatientCurator role to use the ...) created by Nicklas Nordborg
This function uses the same code as the "Report wizards" in the …

Apr 28, 2016:

3:39 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3898]) References #881: Implement INCA XML to CSV converter …
3:39 PM Changeset [3898] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Changes to make …
3:37 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3897]) References #881: Implement INCA XML to CSV converter …
3:37 PM Changeset [3897] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Changes to make …
3:00 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3896]) References #881: Implement INCA XML to CSV converter …
3:00 PM Changeset [3896] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Updated README …
2:59 PM net.sf.basedb.inca edited by Nicklas Nordborg
Added link to README (diff)
2:57 PM Ticket #525 (Import data from INCA) updated by olle
(In [3895]) Refs #525. INCA importer updated to accept alternative …
2:57 PM Changeset [3895] by olle
Refs #525. INCA importer updated to accept alternative headers for …
2:25 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3894]) References #881: Implement INCA XML to CSV converter …
2:25 PM Changeset [3894] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Arrgggh... …
2:24 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3893]) References #881: Implement INCA XML to CSV converter …
2:24 PM Changeset [3893] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Ignore the new …
2:19 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3892]) References #881: Implement INCA XML to CSV converter …
2:19 PM Changeset [3892] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Renamed JAR/TAR …
2:16 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3891]) References #881: Implement INCA XML to CSV converter …
2:16 PM Changeset [3891] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Personal number …
1:16 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3890]) References #881: Implement INCA XML to CSV converter …
1:16 PM Changeset [3890] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Added "Save as" …
11:22 AM Ticket #525 (Import data from INCA) updated by olle
(In [3889]) Refs #525. INCA importer updated to use an object of the …
11:22 AM Changeset [3889] by olle
Refs #525. INCA importer updated to use an object of the BASE …
10:03 AM Ticket #525 (Import data from INCA) updated by olle
(In [3888]) Refs #525. INCA importer updated to accept alternative …
10:03 AM Changeset [3888] by olle
Refs #525. INCA importer updated to accept alternative headers …
9:09 AM Ticket #525 (Import data from INCA) updated by olle
Design discussion: * It has been decided that future INCA input …
8:57 AM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3887]) References #881: Implement INCA XML to CSV converter …
8:57 AM Changeset [3887] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Added a writer …
8:28 AM Ticket #525 (Import data from INCA) updated by olle
(In [3886]) Refs #525. INCA importer updated in the bad value check …
8:28 AM Changeset [3886] by olle
Refs #525. INCA importer updated in the bad value check for INCA …

Apr 27, 2016:

2:42 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3885]) References #881: Implement INCA XML to CSV converter …
2:42 PM Changeset [3885] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Added a SAX …
12:39 PM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3884]) References #881: Implement INCA XML to CSV converter Open …
12:39 PM Changeset [3884] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Open a file …
11:56 AM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3883]) References #881: Implement INCA XML to CSV converter …
11:56 AM Changeset [3883] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Added parser for …
11:24 AM Ticket #525 (Import data from INCA) updated by olle
(In [3882]) Refs #525. INCA importer updated in the bad value check …
11:24 AM Changeset [3882] by olle
Refs #525. INCA importer updated in the bad value check for INCA …
10:36 AM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
(In [3881]) References #881: Implement INCA XML to CSV converter …
10:36 AM Changeset [3881] by Nicklas Nordborg
References #881: Implement INCA XML to CSV converter Added * Folder …
9:57 AM Ticket #881 (Implement INCA XML to CSV converter) updated by Nicklas Nordborg
Milestone changed
9:56 AM Ticket #881 (Implement INCA XML to CSV converter) created by Nicklas Nordborg
We should implement a simple standalone Java program that converts an …
9:50 AM net.sf.basedb.inca created by Nicklas Nordborg
Added wiki page about the INCA Xml to CSV converter
9:02 AM Changeset [3880] by Nicklas Nordborg
Creating space for the new INCA XML to CSV converter project.
9:02 AM Changeset [3879] by Nicklas Nordborg
Creating space for the new INCA XML to CSV converter project.
8:48 AM Changeset [3878] by Nicklas Nordborg
Preparing for future release LabEnv 1.6
8:47 AM Milestone LabEnv v1.5 completed
See LabEnv extension page for more information.
8:47 AM PluginDownload edited by Nicklas Nordborg
Released LabEnv 1.5 (diff)
8:46 AM net.sf.basedb.labenv edited by Nicklas Nordborg
Released LabEnv 1.5 (diff)
8:44 AM labenv-1.5.tar.gz attached to net.sf.basedb.labenv by Nicklas Nordborg
LabEnv 1.5
8:42 AM Changeset [3877] by Nicklas Nordborg
Tagging LabEnv 1.5
8:42 AM Changeset [3876] by Nicklas Nordborg
Preparing to release LabEnv 1.5
8:13 AM net.sf.basedb.meludi.background_software_info edited by olle
Added information on qPCR to sections 2.2.3 and 2.2.4 (diff)
7:43 AM net.sf.basedb.meludi.background_software_info edited by olle
Added information to section 2.3 (diff)

Apr 26, 2016:

4:57 PM net.sf.basedb.meludi.background_software_info edited by olle
Renumbering sections and adding new material (diff)
4:03 PM net.sf.basedb.meludi.background_software_info edited by olle
Typos fixed and some text clarified (diff)
3:53 PM net.sf.basedb.meludi edited by olle
Added information on wiki page "MeLuDI Software Information" (diff)
2:12 PM Ticket #525 (Import data from INCA) updated by olle
(In [3875]) Refs #525. INCA import updated: a. Use of snapshot …
2:12 PM Changeset [3875] by olle
Refs #525. INCA import updated: a. Use of snapshot manager when …
2:09 PM Ticket #525 (Import data from INCA) updated by olle
Design update: * Use of snapshot manager when getting annotation …

Apr 25, 2016:

12:44 PM Ticket #842 (Update to Hibernate 5) closed by Nicklas Nordborg
fixed: (In [3874]) Fixes #842: Update to Hibernate 5
12:44 PM Changeset [3874] by Nicklas Nordborg
Fixes #842: Update to Hibernate 5
11:17 AM Ticket #842 (Update to Hibernate 5) updated by Nicklas Nordborg
Milestone changed

Apr 22, 2016:

4:38 PM Milestone MeLuDI v1.4.3 completed
Updates of the MeLuDI extension to BASE, a package of registration …
4:37 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.3 has been created.
4:34 PM PluginDownload edited by olle
Added information on MeLuDI 1.4.3 (diff)
4:31 PM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.4.3 (diff)
4:23 PM meludi-1.4.3.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.4.3
4:21 PM Changeset [3873] by olle
Tagging release 1.4.3
4:17 PM net.sf.basedb.meludi.notes1_4_3 created by olle
Added information on MeLuDI 1.4.3
4:10 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) updated by olle
(In [3872]) Refs #880. Updates due to version number change to …
4:10 PM Changeset [3872] by olle
Refs #880. Updates due to version number change to "1.4.3". 1. …
3:37 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) updated by olle
(In [3871]) Refs #880. MeLuDI updated in library preparation wizards …
3:37 PM Changeset [3871] by olle
Refs #880. MeLuDI updated in library preparation wizards to use BASE …
3:23 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) updated by olle
(In [3870]) Refs #880. File selection dialogs for data in tabular …
3:23 PM Changeset [3870] by olle
Refs #880. File selection dialogs for data in tabular format now open …
2:08 PM Milestone Reggie v4.3.1 completed
Bug fixes for Reggie 4.3. Revision Log: …
2:07 PM Changeset [3869] by Nicklas Nordborg
Merge patch release Reggie 4.3.1 to the trunk.
1:43 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) updated by olle
(In [3868]) Refs #880. Updates due to version number change to …
1:43 PM Changeset [3868] by olle
Refs #880. Updates due to version number change to "1.4.3-dev". 1. …
1:40 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) updated by olle
Traceability note: * MeLuDi v.1.0 was introduced in Ticket #690
1:37 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) updated by olle
Status changed
Ticket accepted.
1:37 PM Ticket #880 (MeLuDI v.1.4.2 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.4.2.
10:10 AM Ticket #525 (Import data from INCA) updated by olle
(In [3867]) Refs #525. INCA import updated in report file management. …
10:10 AM Changeset [3867] by olle
Refs #525. INCA import updated in report file management. The report …
10:02 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 4.3.1 (diff)
10:01 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.3.1 (diff)
10:00 AM reggie-4.3.1.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.3.1
9:59 AM Changeset [3866] by Nicklas Nordborg
Tagging Reggie 4.3.1
9:58 AM Changeset [3865] by Nicklas Nordborg
Preparing to release Reggie 4.3.1
9:54 AM Ticket #525 (Import data from INCA) updated by Nicklas Nordborg
(In [3864]) References #525: Import data from INCA Remove unused …
9:54 AM Changeset [3864] by Nicklas Nordborg
References #525: Import data from INCA Remove unused code. This …
9:53 AM Ticket #878 (The YellowLabel wizard display Library *.dil items instead of Library items) closed by Nicklas Nordborg
fixed: (In [3863]) Fixes #878: The YellowLabel wizard display Library *.dil …
9:53 AM Changeset [3863] by Nicklas Nordborg
Fixes #878: The YellowLabel wizard display Library *.dil items instead …
9:51 AM Ticket #878 (The YellowLabel wizard display Library *.dil items instead of Library items) updated by Nicklas Nordborg
Milestone changed
9:16 AM Changeset [3862] by Nicklas Nordborg
Creating bugfix branch for Reggie 4.3
8:31 AM Ticket #879 (Switch to BASE 3.8) updated by Nicklas Nordborg
(In [3861]) References #879: Switch to BASE 3.8 Removing calls to …
8:31 AM Changeset [3861] by Nicklas Nordborg
References #879: Switch to BASE 3.8 Removing calls to deprecated …
8:26 AM Ticket #872 (Register Reggie as a start page) closed by Nicklas Nordborg
fixed: (In [3860]) Fixes #872: Register Reggie as a start page
8:26 AM Changeset [3860] by Nicklas Nordborg
Fixes #872: Register Reggie as a start page
8:17 AM Ticket #879 (Switch to BASE 3.8) closed by Nicklas Nordborg
fixed: (In [3859]) Fixes #879: Switch to BASE 3.8
8:17 AM Changeset [3859] by Nicklas Nordborg
Fixes #879: Switch to BASE 3.8
8:16 AM Ticket #879 (Switch to BASE 3.8) updated by Nicklas Nordborg
Description changed
8:15 AM Ticket #879 (Switch to BASE 3.8) updated by Nicklas Nordborg
Status changed
8:15 AM Tickets #525,​872 batch updated by Nicklas Nordborg
Milestone changed
8:12 AM Ticket #879 (Switch to BASE 3.8) created by Nicklas Nordborg
The INCA importer (#525) already requires BASE 3.8 and some changes …

Apr 21, 2016:

4:15 PM Ticket #525 (Import data from INCA) updated by olle
(In [3858]) Refs #525. Inca import updated in the commit step to use …
4:15 PM Changeset [3858] by olle
Refs #525. Inca import updated in the commit step to use the …
2:30 PM Ticket #525 (Import data from INCA) updated by olle
Design update: * Inca import should be updated in the commit step to …
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