Timeline


and

Feb 10, 2016:

5:00 PM Milestone LabEnv v1.4 completed
See LabEnv extension page for more information.
4:59 PM Ticket #845 (Remove LabEnv references to Reggie) closed by olle
fixed: Ticket closed as the requested functionality has been added.
4:57 PM PluginDownload edited by olle
Added information on LabEnv? 1.4 (diff)
4:55 PM net.sf.basedb.labenv edited by olle
Added information on LabEnv 1.4 (diff)
4:50 PM Changeset [3737] by olle
Tagging release 1.4
4:45 PM labenv-1.4.tar.gz attached to net.sf.basedb.labenv by olle
Added labenv-1.4.tar.gz
4:37 PM Changeset [3736] by olle
Refs #845. Updates due to version number change to "1.4". 1. …
4:08 PM Changeset [3735] by olle
Refs #845. LabEnv updated by removing references to Reggie, and by …
12:37 PM Ticket #845 (Remove LabEnv references to Reggie) created by olle
LabEnv uses some css and javascript files from old versions of …
9:59 AM Changeset [3734] by olle
Refs #843. Outermost class path file updated due to minimum BASE …
9:37 AM Ticket #843 (Set <max-base-version> to 3.8.0) closed by olle
fixed: Ticket closed as the requested changes has been added.
9:35 AM Changeset [3733] by olle
Refs #843. Updates due to maximum BASE version number set to "3.8.0" …
9:17 AM Changeset [3732] by olle
Refs #843. Updates due to minimum BASE version number change to …
8:27 AM Ticket #844 (Switch to Java 8) closed by nicklas
fixed: (In [3731]) Fixes #844: Switch to Java 8
8:27 AM Changeset [3731] by nicklas
Fixes #844: Switch to Java 8
8:14 AM Ticket #844 (Switch to Java 8) created by nicklas
Java 8 is recommended since BASE 3.6. See for example #783.
8:04 AM Ticket #843 (Set <max-base-version> to 3.8.0) created by nicklas
See #842 which must be fixed before LabEnv works with BASE 3.8. To …
7:59 AM Ticket #842 (Update to Hibernate 5) created by nicklas
BASE 3.8 is updating to Hibernate 5 …

Feb 4, 2016:

8:18 AM Ticket #840 (Change cutoff for Caliper HiSense to 50ng/µl) closed by nicklas
fixed: (In [3730]) Fixes #840: Change cutoff for Caliper HiSense? to 50ng/µl
8:18 AM Changeset [3730] by nicklas
Fixes #840: Change cutoff for Caliper HiSense? to 50ng/µl
8:13 AM Ticket #841 (Change required BASE version to BASE 3.7) closed by nicklas
fixed: (In [3729]) Fixes #841: Change required BASE version to BASE 3.7
8:13 AM Changeset [3729] by nicklas
Fixes #841: Change required BASE version to BASE 3.7
8:02 AM Ticket #841 (Change required BASE version to BASE 3.7) created by nicklas
Th production server has been upgraded. Even if there is not currently …
7:59 AM Ticket #840 (Change cutoff for Caliper HiSense to 50ng/µl) created by nicklas
When deciding if a RNAQC should use the HiSense option or not there …

Feb 2, 2016:

12:31 PM Milestone MeLuDI v1.4.2 completed
Updates of the MeLuDI extension to BASE, a package of registration …
12:30 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.2 has been created.
12:27 PM PluginDownload edited by olle
Added information on MeLuDI 1.4.2 (diff)
12:23 PM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.4.2 (diff)
12:17 PM meludi-1.4.2.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.4.2
12:15 PM Changeset [3728] by olle
Tagging release 1.4.2
12:11 PM net.sf.basedb.meludi.notes1_4_1 edited by olle
Typos fixed and some text clarified (diff)
12:10 PM net.sf.basedb.meludi.notes1_4_2 created by olle
Added information on MeLuDI 1.4.2
11:59 AM Changeset [3727] by olle
Refs #837. Updates due to version number change to "1.4.2". 1. …
11:52 AM net.sf.basedb.meludi edited by olle
Added project update section (diff)

Jan 28, 2016:

10:55 AM net.sf.basedb.reggie/notes41 edited by nicklas
(diff)
10:55 AM net.sf.basedb.reggie/notes41 created by nicklas
Adding update notes for Reggie 4.1
10:41 AM Ticket #839 (Change YellowLabel status in "Pathology referral form registration" wizard) closed by nicklas
fixed: (In [3726]) Fixes #839: Change YellowLabel? status in "Pathology …
10:41 AM Changeset [3726] by nicklas
Fixes #839: Change YellowLabel? status in "Pathology referral form …

Jan 27, 2016:

2:20 PM Changeset [3725] by nicklas
References #835: Manual normalization with NeoPrep? The "Lab protocols …
8:24 AM Ticket #838 (Partial confirmation of demux job) closed by nicklas
fixed
8:23 AM Changeset [3724] by nicklas
References #838: Partial confirmation of demux job The …

Jan 25, 2016:

12:59 PM Changeset [3723] by nicklas
References #838: Partial confirmation of demux job Added Partial to …

Jan 22, 2016:

3:31 PM Changeset [3722] by olle
Refs #837. Updates due to version number change to "1.4.2-dev". 1. …
2:29 PM Changeset [3721] by olle
Refs #837. Updates due to version number change to "1.4.2a1". 1. …
2:25 PM Changeset [3720] by olle
Refs #837. Bug (hopefully) fixed in wizard "DNA/RNA …
1:29 PM Ticket #834 (Auto-analyze when sequencing has ended) closed by nicklas
fixed
12:30 PM Changeset [3719] by olle
Refs #837. Support for marking DNA extracts for qPCR processing …
11:47 AM Changeset [3718] by nicklas
References #834: Auto-analyze when sequencing has ended The "Register …
11:24 AM Ticket #839 (Change YellowLabel status in "Pathology referral form registration" wizard) created by nicklas
See #827 and #771: Selected Yellow label samples are highlighted in …
8:19 AM Changeset [3717] by nicklas
References #834: Auto-analyze when sequencing has ended Removing …

Jan 21, 2016:

9:17 AM Changeset [3716] by nicklas
References #834: Auto-analyze when sequencing has ended The barcode …
8:06 AM Changeset [3715] by nicklas
References #834: Auto-analyze when sequencing has ended …

Jan 20, 2016:

2:15 PM Changeset [3714] by nicklas
References #834: Auto-analyze when sequencing has ended Re-factored …
1:09 PM Ticket #838 (Partial confirmation of demux job) created by nicklas
The auto-confirm functionality for demux jobs have some rules that are …
12:30 PM Changeset [3713] by olle
Refs #837. Wizard "Inspect/edit library preparation kit data" in …
12:18 PM Changeset [3712] by olle
Refs #837. Updates due to version number change to "1.4.2-dev". 1. …
11:18 AM net.sf.basedb.meludi edited by olle
Fixed wrong link to MeLuDI v1.4.1 (diff)
11:15 AM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.4.1.
10:22 AM Milestone MeLuDI v1.4.1 completed
Updates of the MeLuDI extension to BASE, a package of registration …
10:21 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.1 has been created.
10:17 AM PluginDownload edited by olle
Added information on MeLuDI 1.4.1 (diff)
10:15 AM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.4.1 (diff)
10:07 AM meludi-1.4.1.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.4.1
10:06 AM net.sf.basedb.meludi.notes1_4_1 edited by olle
Typo fixed. (diff)
10:05 AM net.sf.basedb.meludi.notes1_4_1 created by olle
Added information on MeLuDI 1.4.1
10:00 AM Changeset [3711] by olle
Tagging release 1.4.1
9:56 AM Changeset [3710] by olle
Refs #836. Updates due to version number change to "1.4.1". 1. …
9:42 AM Changeset [3709] by olle
Refs #836. Wizard "Create new start DNA plate" in sub-section "Start …

Jan 19, 2016:

11:32 AM Changeset [3708] by olle
Refs #836. Refs #816. Updates due to version number change to …
11:27 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.4.0.
11:24 AM Milestone MeLuDI v1.4.0 completed
Updates of the MeLuDI extension to BASE, a package of registration …
11:19 AM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.0 has been created.
11:19 AM Ticket #801 (MeLuDI library preparation wizards first version) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.0 has been created.
11:08 AM PluginDownload edited by olle
Added information on MeLuDI 1.4.0 (diff)
11:06 AM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.4.0 (diff)
10:59 AM meludi-1.4.0.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.4.0
10:54 AM Changeset [3707] by olle
Tagging release 1.4.0
10:47 AM Changeset [3706] by olle
Refs #801. Refs #816. Outermost README file updated for MeLuDI 1.4.0 …
10:27 AM net.sf.basedb.meludi.notes1_4_0 edited by olle
Added info on setting LibraryPrep role for users plus minor fixes (diff)
10:06 AM Changeset [3705] by olle
Refs #801. Refs #816. Wizard "Inspect/edit library preparation kit …
9:36 AM Changeset [3704] by nicklas
References #834: Auto-analyze when sequencing has ended Implemented …
7:31 AM Changeset [3703] by olle
Refs #801. Refs #816. Section header "Library preparation wizards" …

Jan 18, 2016:

4:51 PM net.sf.basedb.meludi.notes1_4_0 created by olle
Added information on MeLuDI 1.4.0
4:27 PM Changeset [3702] by olle
Refs #801. Refs #816. Updates due to version number change to …
4:08 PM Changeset [3701] by olle
Refs #801. Refs #816. Outermost README file updated for MeLuDI 1.4.0.
2:39 PM Changeset [3700] by nicklas
References #834: Auto-analyze when sequencing has ended Started to …
1:06 PM Changeset [3699] by nicklas
References #834: Auto-analyze when sequencing has ended Implemented …
8:45 AM Changeset [3698] by nicklas
Adding nextseq_status.sh script for checking the status of a NextSeq?
8:42 AM Changeset [3697] by nicklas
References #834: Auto-analyze when sequencing has ended Implemented …

Jan 15, 2016:

3:45 PM Changeset [3696] by olle
Refs #801. Refs #816. Updates due to version number change to …
3:42 PM Changeset [3695] by olle
Refs #801. Refs #816. Updates due to version number change to …
2:44 PM Changeset [3694] by olle
Refs #816. Refs #801. Wizard "DNA/RNA registration/quantification" in …
12:00 PM Changeset [3693] by olle
Refs #801. Refs #816. Wizard "Inspect start DNA plate" in sub-section …

Jan 13, 2016:

1:56 PM Changeset [3692] by nicklas
References #834: Auto-analyze when sequencing has ended Sequencing …
11:21 AM Changeset [3691] by nicklas
References #834: Auto-analyze when sequencing has ended Added …
9:05 AM reggie-4.0.png attached to net.sf.basedb.reggie/HistoryOfReggie by nicklas
Reggie 4.0
8:55 AM net.sf.basedb.reggie/HistoryOfReggie edited by nicklas
(diff)
8:37 AM Ticket #835 (Manual normalization with NeoPrep) created by nicklas
The NeoPrep track that was implemented some time ago (#764) assumes …
8:28 AM Changeset [3690] by nicklas
Preparing for future release Reggie 4.1
8:27 AM Milestone Reggie v4.0 completed
See Reggie extension page for more information.
8:26 AM PluginDownload edited by nicklas
Released Reggie 4.0 (diff)
8:25 AM net.sf.basedb.reggie edited by nicklas
Released Reggie 4.0 (diff)
8:23 AM reggie-4.0.tar.gz attached to net.sf.basedb.reggie by nicklas
Reggie 4.0
8:20 AM Changeset [3689] by nicklas
Tagging Reggie 4.0
8:19 AM Changeset [3688] by nicklas
Preparing to release Reggie 4.0

Jan 12, 2016:

12:14 PM Changeset [3687] by olle
Refs #801. Refs #816. Updates due to version number change to …
11:59 AM Changeset [3686] by olle
Refs #801. Refs #816. Updates due to version number change to …
8:33 AM Changeset [3685] by olle
Refs #801. Refs #816. Wizards for creating and inspecting a start …
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