Timeline



Feb 2, 2016:

3:54 PM Ticket #525 (Import data from INCA) updated by olle
Possible discrepancies between SCAN-B and INCA data: Possible causes …
12:31 PM Milestone MeLuDI v1.4.2 completed
Updates of the MeLuDI extension to BASE, a package of registration …
12:30 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.2 has been created.
12:27 PM PluginDownload edited by olle
Added information on MeLuDI 1.4.2 (diff)
12:23 PM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.4.2 (diff)
12:17 PM meludi-1.4.2.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.4.2
12:15 PM Changeset [3728] by olle
Tagging release 1.4.2
12:11 PM net.sf.basedb.meludi.notes1_4_1 edited by olle
Typos fixed and some text clarified (diff)
12:10 PM net.sf.basedb.meludi.notes1_4_2 created by olle
Added information on MeLuDI 1.4.2
11:59 AM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
(In [3727]) Refs #837. Updates due to version number change to …
11:59 AM Changeset [3727] by olle
Refs #837. Updates due to version number change to "1.4.2". 1. …
11:52 AM net.sf.basedb.meludi edited by olle
Added project update section (diff)
11:45 AM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
Project update: * On 2016-01-21 it was announced that the parent …

Jan 28, 2016:

12:39 PM Ticket #525 (Import data from INCA) updated by olle
Background info on INCA export files: * Traditionally, INCA export …
11:48 AM Ticket #525 (Import data from INCA) updated by olle
Background info: * INCA is an abbreviation of the Swedish expression …
11:47 AM Ticket #525 (Import data from INCA) updated by olle
Traceability note: * Creation of a csv file to be used when …
11:43 AM Ticket #525 (Import data from INCA) updated by olle
Status changed
Ticket accepted.
11:42 AM Ticket #525 (Import data from INCA) updated by olle
Owner changed
Ticket reassigned to "olle".
10:55 AM net.sf.basedb.reggie/notes41 edited by Nicklas Nordborg
(diff)
10:55 AM net.sf.basedb.reggie/notes41 created by Nicklas Nordborg
Adding update notes for Reggie 4.1
10:41 AM Ticket #839 (Change YellowLabel status in "Pathology referral form registration" wizard) closed by Nicklas Nordborg
fixed: (In [3726]) Fixes #839: Change YellowLabel status in "Pathology …
10:41 AM Changeset [3726] by Nicklas Nordborg
Fixes #839: Change YellowLabel status in "Pathology referral form …

Jan 27, 2016:

2:20 PM Ticket #835 (Manual normalization with NeoPrep) updated by Nicklas Nordborg
(In [3725]) References #835: Manual normalization with NeoPrep The …
2:20 PM Changeset [3725] by Nicklas Nordborg
References #835: Manual normalization with NeoPrep The "Lab protocols …
8:24 AM Ticket #835 (Manual normalization with NeoPrep) updated by Nicklas Nordborg
Status changed
8:24 AM Ticket #838 (Partial confirmation of demux job) closed by Nicklas Nordborg
fixed
8:23 AM Ticket #838 (Partial confirmation of demux job) updated by Nicklas Nordborg
(In [3724]) References #838: Partial confirmation of demux job The …
8:23 AM Changeset [3724] by Nicklas Nordborg
References #838: Partial confirmation of demux job The …

Jan 25, 2016:

12:59 PM Ticket #838 (Partial confirmation of demux job) updated by Nicklas Nordborg
(In [3723]) References #838: Partial confirmation of demux job Added …
12:59 PM Changeset [3723] by Nicklas Nordborg
References #838: Partial confirmation of demux job Added Partial to …

Jan 22, 2016:

3:31 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
(In [3722]) Refs #837. Updates due to version number change to …
3:31 PM Changeset [3722] by olle
Refs #837. Updates due to version number change to "1.4.2-dev". 1. …
2:29 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
(In [3721]) Refs #837. Updates due to version number change to …
2:29 PM Changeset [3721] by olle
Refs #837. Updates due to version number change to "1.4.2a1". 1. …
2:25 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
(In [3720]) Refs #837. Bug (hopefully) fixed in wizard "DNA/RNA …
2:25 PM Changeset [3720] by olle
Refs #837. Bug (hopefully) fixed in wizard "DNA/RNA …
2:23 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
Functional specification update: * A bug was found in wizard …
1:44 PM Ticket #838 (Partial confirmation of demux job) updated by Nicklas Nordborg
Status changed
1:29 PM Ticket #834 (Auto-analyze when sequencing has ended) closed by Nicklas Nordborg
fixed
12:30 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
(In [3719]) Refs #837. Support for marking DNA extracts for qPCR …
12:30 PM Changeset [3719] by olle
Refs #837. Support for marking DNA extracts for qPCR processing …
12:26 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
Functional specification update: * Support for marking DNA extracts …
11:47 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3718]) References #834: Auto-analyze when sequencing has ended …
11:47 AM Changeset [3718] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended The "Register …
11:24 AM Ticket #839 (Change YellowLabel status in "Pathology referral form registration" wizard) created by Nicklas Nordborg
See #827 and #771: Selected Yellow label samples are highlighted in …
8:19 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3717]) References #834: Auto-analyze when sequencing has ended …
8:19 AM Changeset [3717] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Removing …

Jan 21, 2016:

9:17 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3716]) References #834: Auto-analyze when sequencing has ended …
9:17 AM Changeset [3716] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended The barcode …
8:06 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3715]) References #834: Auto-analyze when sequencing has ended …
8:06 AM Changeset [3715] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended …

Jan 20, 2016:

2:15 PM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3714]) References #834: Auto-analyze when sequencing has ended …
2:15 PM Changeset [3714] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Re-factored …
1:54 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
Background information: * Not all DNA extracts registered in MeLuDI …
1:09 PM Ticket #838 (Partial confirmation of demux job) created by Nicklas Nordborg
The auto-confirm functionality for demux jobs have some rules that are …
12:30 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
(In [3713]) Refs #837. Wizard "Inspect/edit library preparation kit …
12:30 PM Changeset [3713] by olle
Refs #837. Wizard "Inspect/edit library preparation kit data" in …
12:29 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
Functional specification update: * Wizard "Inspect/edit library …
12:18 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
(In [3712]) Refs #837. Updates due to version number change to …
12:18 PM Changeset [3712] by olle
Refs #837. Updates due to version number change to "1.4.2-dev". 1. …
12:15 PM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
Traceability note: * MeLuDi v.1.0 was introduced in Ticket #690
12:01 PM Ticket #827 (Implement support for YellowLabel in the specimen tube registration wizard) updated by johan
Selected Yellow label samples are highlighted in the "Pathology …
11:20 AM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) updated by olle
Status changed
Ticket accepted.
11:18 AM net.sf.basedb.meludi edited by olle
Fixed wrong link to MeLuDI v1.4.1 (diff)
11:15 AM Ticket #837 (MeLuDI v.1.4.1 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.4.1.
10:22 AM Milestone MeLuDI v1.4.1 completed
Updates of the MeLuDI extension to BASE, a package of registration …
10:21 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.1 has been created.
10:17 AM PluginDownload edited by olle
Added information on MeLuDI 1.4.1 (diff)
10:15 AM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.4.1 (diff)
10:07 AM meludi-1.4.1.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.4.1
10:06 AM net.sf.basedb.meludi.notes1_4_1 edited by olle
Typo fixed. (diff)
10:05 AM net.sf.basedb.meludi.notes1_4_1 created by olle
Added information on MeLuDI 1.4.1
10:00 AM Changeset [3711] by olle
Tagging release 1.4.1
9:56 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) updated by olle
(In [3710]) Refs #836. Updates due to version number change to …
9:56 AM Changeset [3710] by olle
Refs #836. Updates due to version number change to "1.4.1". 1. …
9:47 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) updated by olle
It was decided to make a fast release of MeLuDI v1.4.1, since the new …
9:42 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) updated by olle
(In [3709]) Refs #836. Wizard "Create new start DNA plate" in …
9:42 AM Changeset [3709] by olle
Refs #836. Wizard "Create new start DNA plate" in sub-section "Start …
9:40 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) updated by olle
Functional specification update: * Wizard "Create new start DNA …

Jan 19, 2016:

11:32 AM Tickets #816,​836 batch updated by olle
(In [3708]) Refs #836. Updates due to version number change to …
11:32 AM Changeset [3708] by olle
Refs #836. Refs #816. Updates due to version number change to …
11:30 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) updated by olle
Traceability note: * MeLuDi v.1.0 was introduced in Ticket #690
11:28 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) updated by olle
Status changed
Ticket accepted.
11:27 AM Ticket #836 (MeLuDI v.1.4.0 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.4.0.
11:24 AM Milestone MeLuDI v1.4.0 completed
Updates of the MeLuDI extension to BASE, a package of registration …
11:19 AM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.0 has been created.
11:19 AM Ticket #801 (MeLuDI library preparation wizards first version) closed by olle
fixed: Ticket closed as MeLuDI version 1.4.0 has been created.
11:08 AM PluginDownload edited by olle
Added information on MeLuDI 1.4.0 (diff)
11:06 AM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.4.0 (diff)
10:59 AM meludi-1.4.0.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.4.0
10:54 AM Changeset [3707] by olle
Tagging release 1.4.0
10:47 AM Tickets #801,​816 batch updated by olle
(In [3706]) Refs #801. Refs #816. Outermost README file updated for …
10:47 AM Changeset [3706] by olle
Refs #801. Refs #816. Outermost README file updated for MeLuDI 1.4.0 …
10:27 AM net.sf.basedb.meludi.notes1_4_0 edited by olle
Added info on setting LibraryPrep role for users plus minor fixes (diff)
10:06 AM Tickets #801,​816 batch updated by olle
(In [3705]) Refs #801. Refs #816. Wizard "Inspect/edit library …
10:06 AM Changeset [3705] by olle
Refs #801. Refs #816. Wizard "Inspect/edit library preparation kit …
10:05 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by olle
Functional specification update: * Wizard "Inspect/edit library …
9:36 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3704]) References #834: Auto-analyze when sequencing has ended …
9:36 AM Changeset [3704] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Implemented …
7:31 AM Tickets #801,​816 batch updated by olle
(In [3703]) Refs #801. Refs #816. Section header "Library preparation …
7:31 AM Changeset [3703] by olle
Refs #801. Refs #816. Section header "Library preparation wizards" …

Jan 18, 2016:

4:51 PM net.sf.basedb.meludi.notes1_4_0 created by olle
Added information on MeLuDI 1.4.0
4:27 PM Tickets #801,​816 batch updated by olle
(In [3702]) Refs #801. Refs #816. Updates due to version number change …
4:27 PM Changeset [3702] by olle
Refs #801. Refs #816. Updates due to version number change to …
4:08 PM Tickets #801,​816 batch updated by olle
(In [3701]) Refs #801. Refs #816. Outermost README file updated for …
4:08 PM Changeset [3701] by olle
Refs #801. Refs #816. Outermost README file updated for MeLuDI 1.4.0.
2:39 PM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3700]) References #834: Auto-analyze when sequencing has ended …
2:39 PM Changeset [3700] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Started to …
1:06 PM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3699]) References #834: Auto-analyze when sequencing has ended …
1:06 PM Changeset [3699] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Implemented …
8:45 AM Changeset [3698] by Nicklas Nordborg
Adding nextseq_status.sh script for checking the status of a NextSeq
8:42 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3697]) References #834: Auto-analyze when sequencing has ended …
8:42 AM Changeset [3697] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Implemented …

Jan 15, 2016:

3:45 PM Tickets #801,​816 batch updated by olle
(In [3696]) Refs #801. Refs #816. Updates due to version number change …
3:45 PM Changeset [3696] by olle
Refs #801. Refs #816. Updates due to version number change to …
3:42 PM Tickets #801,​816 batch updated by olle
(In [3695]) Refs #801. Refs #816. Updates due to version number change …
3:42 PM Changeset [3695] by olle
Refs #801. Refs #816. Updates due to version number change to …
2:44 PM Tickets #801,​816 batch updated by olle
(In [3694]) Refs #816. Refs #801. Wizard "DNA/RNA …
2:44 PM Changeset [3694] by olle
Refs #816. Refs #801. Wizard "DNA/RNA registration/quantification" in …
2:41 PM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by olle
Functional specification update: * Wizard "DNA/RNA …
12:00 PM Tickets #801,​816 batch updated by olle
(In [3693]) Refs #801. Refs #816. Wizard "Inspect start DNA plate" in …
12:00 PM Changeset [3693] by olle
Refs #801. Refs #816. Wizard "Inspect start DNA plate" in sub-section …

Jan 13, 2016:

1:56 PM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3692]) References #834: Auto-analyze when sequencing has ended …
1:56 PM Changeset [3692] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Sequencing …
11:21 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
(In [3691]) References #834: Auto-analyze when sequencing has ended …
11:21 AM Changeset [3691] by Nicklas Nordborg
References #834: Auto-analyze when sequencing has ended Added …
9:05 AM reggie-4.0.png attached to net.sf.basedb.reggie/HistoryOfReggie by Nicklas Nordborg
Reggie 4.0
8:55 AM net.sf.basedb.reggie/HistoryOfReggie edited by Nicklas Nordborg
(diff)
8:37 AM Ticket #835 (Manual normalization with NeoPrep) created by Nicklas Nordborg
The NeoPrep track that was implemented some time ago (#764) assumes …
8:29 AM Ticket #834 (Auto-analyze when sequencing has ended) updated by Nicklas Nordborg
Status, Milestone changed
8:28 AM Changeset [3690] by Nicklas Nordborg
Preparing for future release Reggie 4.1
8:27 AM Milestone Reggie v4.0 completed
See Reggie extension page for more information.
8:26 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 4.0 (diff)
8:25 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.0 (diff)
8:23 AM reggie-4.0.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.0
8:20 AM Changeset [3689] by Nicklas Nordborg
Tagging Reggie 4.0
8:19 AM Changeset [3688] by Nicklas Nordborg
Preparing to release Reggie 4.0
8:03 AM Ticket #785 (Separate project archive folder for external samples) updated by Nicklas Nordborg
Description changed

Jan 12, 2016:

12:14 PM Tickets #801,​816 batch updated by olle
(In [3687]) Refs #801. Refs #816. Updates due to version number change …
12:14 PM Changeset [3687] by olle
Refs #801. Refs #816. Updates due to version number change to …
11:59 AM Tickets #801,​816 batch updated by olle
(In [3686]) Refs #801. Refs #816. Updates due to version number change …
11:59 AM Changeset [3686] by olle
Refs #801. Refs #816. Updates due to version number change to …
11:34 AM Tickets #801,​816 batch updated by olle
Milestone changed
Milestone renamed
11:26 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by olle
MeLuDI version number change: * Since the next release of MeLuDI …
11:25 AM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by olle
MeLuDI version number change: * Since the next release of MeLuDI …
8:33 AM Tickets #801,​816 batch updated by olle
(In [3685]) Refs #801. Refs #816. Wizards for creating and inspecting …
8:33 AM Changeset [3685] by olle
Refs #801. Refs #816. Wizards for creating and inspecting a start …

Jan 8, 2016:

4:46 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by olle
Functional specification update: * Wizards for creating and …
12:52 PM Tickets #801,​816 batch updated by olle
(In [3684]) Refs #801. Refs #816. Library preparation dilution …
12:52 PM Changeset [3684] by olle
Refs #801. Refs #816. Library preparation dilution protocol created in …
12:50 PM Ticket #801 (MeLuDI library preparation wizards first version) updated by olle
Functional specification update: * Library preparation dilution …

Jan 7, 2016:

4:07 PM Tickets #801,​816 batch updated by olle
(In [3683]) Refs #801. Refs #816. DNA/RNA extraction wizards updated …
4:07 PM Changeset [3683] by olle
Refs #801. Refs #816. DNA/RNA extraction wizards updated in step 2 by …
4:04 PM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) updated by olle
Functional specification update: * DNA/RNA extraction wizards should …

Jan 4, 2016:

9:52 AM Tickets #801,​816 batch updated by olle
(In [3682]) Refs #801. Refs #816. Wizards "Create new start DNA plate" …
9:52 AM Changeset [3682] by olle
Refs #801. Refs #816. Wizards "Create new start DNA plate" and …
9:51 AM Ticket #801 (MeLuDI library preparation wizards first version) updated by olle
Functional specification update: * Wizards "Create new start DNA …
Note: See TracTimeline for information about the timeline view.