Timeline



Oct 15, 2015:

10:46 AM Changeset [3544] by Nicklas Nordborg
References #819: Printable lab protocol from Create aliquots on …

Oct 14, 2015:

2:11 PM Changeset [3543] by Nicklas Nordborg
References #812: Pilot report wizard Minor adjusments to text …
9:51 AM Changeset [3542] by Nicklas Nordborg
References #812: Pilot report wizard Importing the …
9:35 AM Changeset [3541] by Nicklas Nordborg
References #812: Pilot report wizard Setting R source encoding to …

Oct 13, 2015:

4:45 PM Changeset [3540] by olle
Refs #801. Refs #816. Updates due to version number change to …
4:09 PM Changeset [3539] by olle
Refs #801. Refs #816. Updates due to version number change to …
3:59 PM Changeset [3538] by olle
Refs #801. Refs #816. Sub-section "Reagent kit management wizards" is …
1:20 PM Changeset [3537] by olle
Refs #801. Refs #816. Wizard "Create new start DNA plate" updated in …
12:11 PM Changeset [3536] by olle
Refs #801. Refs #816. It has been decided not to use role …
11:53 AM Ticket #819 (Printable lab protocol from Create aliquots on Bioanalyzer/Caliper ...) created by Nicklas Nordborg
The third step in this wizard contains information that is needed in …
11:50 AM Ticket #818 (Track volumes of RNAQC aliquots) created by Nicklas Nordborg
The original quantity assigned to RNA items currently assumes that a …

Oct 8, 2015:

2:09 PM Changeset [3535] by Nicklas Nordborg
References #812: Pilot report wizard Parse the *.txt files containing …
1:38 PM Changeset [3534] by Nicklas Nordborg
References #812: Pilot report wizard Adding link to the pilot report …
9:44 AM Changeset [3533] by Nicklas Nordborg
References #812: Pilot report wizard The pilot report now uses the …

Oct 5, 2015:

4:23 PM Changeset [3532] by olle
Refs #801. Refs #816. Case summary updated to present information on …
1:27 PM Changeset [3531] by Nicklas Nordborg
References #812: Pilot report wizard Prepared the script for sending …
11:59 AM Changeset [3530] by olle
Refs #801. Refs #816. Updates due to version number change to …
11:30 AM Changeset [3529] by olle
Refs #801. Refs #816. Updates due to version number change to …
11:03 AM Changeset [3528] by Nicklas Nordborg
References #812: Pilot report wizard Print out molecular subtype …
9:40 AM Changeset [3527] by olle
Refs #801. Refs #816. Roles MeludiRole.LIBRARY_PREP and …
8:57 AM Changeset [3526] by olle
Refs #801. Refs #816. Case summary updated to present information on …
8:52 AM Changeset [3525] by Nicklas Nordborg
References #812: Pilot report wizard The pilot report is updated to …

Oct 2, 2015:

9:22 AM Ticket #817 (Always display rna box position in normalization protocol) closed by Nicklas Nordborg
fixed: (In [3524]) Fixes #817: Always display rna box position in …
9:22 AM Changeset [3524] by Nicklas Nordborg
Fixes #817: Always display rna box position in normalization protocol
9:15 AM Ticket #817 (Always display rna box position in normalization protocol) created by Nicklas Nordborg
This column is currently hidden when all rna items are from the same …

Oct 1, 2015:

4:48 PM Changeset [3523] by olle
Refs #801. Refs #816. Updates due to version number change to …
4:46 PM Ticket #816 (MeLuDI v.1.3.3 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.3.3.
4:42 PM Milestone MeLuDI v1.3.3 completed
Updates of the MeLuDI extension to BASE, a package of registration …
4:38 PM Ticket #815 (MeLuDI v.1.3.2 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.3.3 has been created.
4:31 PM PluginDownload edited by olle
Added information on MeLuDI 1.3.3 (diff)
4:30 PM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.3.3 (diff)
4:25 PM meludi-1.3.3.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.3.3
4:21 PM Changeset [3522] by olle
Tagging release 1.3.3
4:17 PM Changeset [3521] by olle
Refs #801. Refs #815. Updates due to version number change to …
4:00 PM net.sf.basedb.meludi.notes1_3_3 created by olle
Added information on MeLuDI 1.3.3
3:05 PM Changeset [3520] by olle
Refs #801. Refs #815. Javascript file select_dna.js in …
2:51 PM Changeset [3519] by olle
Refs #801. Refs #815. Wizard "Create new start DNA plate" updated …
2:22 PM Changeset [3518] by olle
Refs #801. Refs #815. Since it may take some time before the list of …
1:57 PM Changeset [3517] by olle
Refs #815. Bug fix: The wizard "DNA/RNA registration/quantification" …
12:55 PM Changeset [3516] by olle
Refs #815. Bug fix: The wizard "Update processed start lists with lot …

Sep 30, 2015:

10:55 AM net.sf.basedb.meludi.background_software_info edited by olle
Added info on BASE annotations (diff)
10:09 AM net.sf.basedb.meludi.background_software_info edited by olle
Added info on MeLuDI project vs. software clarification (diff)
10:07 AM net.sf.basedb.meludi.background_software_info edited by olle
Added info on MeLuDI project vs. software (diff)
9:03 AM net.sf.basedb.meludi.background_software_info edited by olle
Added more info in the description section. (diff)
8:51 AM net.sf.basedb.meludi.background_software_info created by olle
Added initial version of wiki page.

Sep 29, 2015:

2:14 PM Changeset [3515] by olle
Refs #815. The "MeLuDI quarter/month report" in the "Sample processing …
12:27 PM Changeset [3514] by olle
Refs #815. Java servlet class/file …

Sep 24, 2015:

12:33 PM PluginDownload edited by olle
Added information on MeLuDI 1.3.2 (diff)
12:29 PM meludi-1.3.2.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.3.2
11:15 AM Ticket #811 (Add support for adding personal information to the Gene report ...) closed by Nicklas Nordborg
fixed
11:15 AM Ticket #810 (Gene report combiner plug-in should be able to combine to a zip file) closed by Nicklas Nordborg
fixed
11:13 AM Changeset [3513] by Nicklas Nordborg
References #812: Pilot report wizard Fixes title on the "Gene/Pilot?
9:56 AM Changeset [3512] by olle
Refs #801. Refs #815. Updates due to version number change to …
9:51 AM Ticket #815 (MeLuDI v.1.3.2 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.3.2.
9:48 AM Milestone MeLuDI v1.3.2 completed
Updates of the MeLuDI extension to BASE, a package of registration …
9:39 AM Ticket #802 (MeLuDI v.1.3.1 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.3.2 has been created.
9:37 AM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.3.2 (diff)
9:25 AM Changeset [3511] by olle
Tagging release 1.3.2
9:18 AM Ticket #814 (New 1x16 pool layout that is offset to the left) closed by Nicklas Nordborg
fixed: (In [3510]) Fixes #814: New 1x16 pool layout that is offset to the left
9:18 AM Changeset [3510] by Nicklas Nordborg
Fixes #814: New 1x16 pool layout that is offset to the left
9:17 AM Ticket #814 (New 1x16 pool layout that is offset to the left) created by Nicklas Nordborg
To avoid issues with rotating the plate in the lab the placement of …
9:15 AM Changeset [3509] by olle
Refs #802. Updates due to version number change to "1.3.2". 1. …
9:10 AM Changeset [3508] by Nicklas Nordborg
References #812: Pilot report wizard The auto-confirmation service …
9:02 AM Changeset [3507] by olle
Refs #802. MeLuDI README file in / updated with minor changes, …
8:38 AM net.sf.basedb.meludi.notes1_3_2 edited by olle
Update instructions reformatted in new order (diff)
8:25 AM net.sf.basedb.meludi.notes1_3_2 edited by olle
Removed old stuff erroneously kept (diff)
8:21 AM net.sf.basedb.meludi.notes1_3_2 edited by olle
Minor changes to information on MeLuDI 1.3.2 (diff)
7:56 AM net.sf.basedb.meludi.notes1_3_2 edited by olle
Completed information on MeLuDI 1.3.2 (and removed old stuff) (diff)

Sep 23, 2015:

4:30 PM net.sf.basedb.meludi.notes1_3_2 created by olle
Added information on MeLuDI 1.3.2
3:28 PM Changeset [3506] by Nicklas Nordborg
References #812: Pilot report wizard Refactored the reporting …
3:16 PM Changeset [3505] by olle
Refs #802. Section "Statistics and reporting wizards" extended with a …
12:41 PM Changeset [3504] by olle
Refs #802. Sample source report wizards updated to only include MeLuDI …

Sep 22, 2015:

1:41 PM Changeset [3503] by Nicklas Nordborg
References #811: Add support for adding personal information to the …
11:10 AM Changeset [3502] by olle
Refs #802. The "DNA/RNA extraction wizards" section updated with a new …

Sep 21, 2015:

3:53 PM Changeset [3501] by olle
Refs #802. The DNA/RNA extraction wizards updated to allow input of …
2:42 PM Changeset [3500] by Nicklas Nordborg
References #812: Pilot report wizard The combine reports plug-in now …
2:27 PM Changeset [3499] by Nicklas Nordborg
References #812: Pilot report wizard Refactored the gene report …

Sep 18, 2015:

2:22 PM Changeset [3498] by Nicklas Nordborg
References #810: Gene report combiner plug-in should be able to …
10:24 AM Milestone Reggie v3.6.1 completed
Bug fixes for Reggie 3.6. Revision Log: …
9:32 AM Changeset [3497] by Nicklas Nordborg
Merged Reggie 3.6.1 to trunk.
9:30 AM net.sf.basedb.reggie edited by Nicklas Nordborg
(diff)
9:30 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 3.6.1 (diff)
9:28 AM reggie-3.6.1.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 3.6.1
9:27 AM Changeset [3496] by Nicklas Nordborg
Tagging Reggie 3.6.1
9:26 AM Changeset [3495] by Nicklas Nordborg
Preparing to release Reggie 3.6.1.
9:23 AM Ticket #813 (IndexOutOfBoundsException when selecting 7 lysates in the Lab Tracking ...) closed by Nicklas Nordborg
fixed: (In [3494]) Fixes #813: IndexOutOfBoundsException? when selecting 7 …
9:23 AM Changeset [3494] by Nicklas Nordborg
Fixes #813: IndexOutOfBoundsException? when selecting 7 lysates in the …
9:19 AM Changeset [3493] by Nicklas Nordborg
Creating bugfix branch for Reggie 3.6
9:09 AM Ticket #813 (IndexOutOfBoundsException when selecting 7 lysates in the Lab Tracking ...) created by Nicklas Nordborg
[…] Seems to work for all 1-6 and 8-12 lysates.
9:01 AM Changeset [3492] by Nicklas Nordborg
References #812: Pilot report wizard Added a pilot wizard stub. The …

Sep 17, 2015:

10:38 AM Ticket #812 (Pilot report wizard) created by Nicklas Nordborg
A new report wizard for the clinical pilot project is needed. It is …
10:00 AM Ticket #811 (Add support for adding personal information to the Gene report ...) created by Nicklas Nordborg
Early versions of this plug-in had support for this so it should not …
9:53 AM Ticket #810 (Gene report combiner plug-in should be able to combine to a zip file) created by Nicklas Nordborg
The current version of the "Gene report combiner" plug-in takes the …
9:47 AM net.sf.basedb.reggie/HistoryOfReggie edited by Nicklas Nordborg
Added Reggie 3.6 screenshot (diff)
9:47 AM reggie-3.6.png attached to net.sf.basedb.reggie/HistoryOfReggie by Nicklas Nordborg
Reggie 3.6
9:42 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 3.6 (diff)
9:42 AM Changeset [3491] by Nicklas Nordborg
Preparing for future release Reggie 3.7
9:40 AM Milestone Reggie v3.6 completed
See Reggie extension page for more information.
9:40 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 3.6 (diff)
9:38 AM reggie-3.6.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 3.6
9:37 AM Changeset [3490] by Nicklas Nordborg
Tagging Reggie 3.6
9:36 AM Changeset [3489] by Nicklas Nordborg
Preparing to release Reggie 3.6

Sep 16, 2015:

1:56 PM Ticket #808 (Import wizard for frozen tissue dates) closed by Nicklas Nordborg
fixed: (In [3488]) Fixes #808: Import wizard for frozen tissue dates The …
1:56 PM Changeset [3488] by Nicklas Nordborg
Fixes #808: Import wizard for frozen tissue dates The wizard and …
11:10 AM Ticket #809 (Improve performance of demux+merge step) closed by Nicklas Nordborg
fixed: Think it is time for some real tests now. What has been done so far …
11:08 AM Changeset [3487] by Nicklas Nordborg
References #809: Improve performance of demux+merge step Switched to …

Sep 15, 2015:

1:38 PM Changeset [3486] by Nicklas Nordborg
References #809: Improve performance of demux+merge step Start gzip …
8:13 AM Changeset [3485] by Nicklas Nordborg
References #809: Improve performance of demux+merge step Added time …
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