Timeline


and

May 19, 2015:

3:38 PM Ticket #786 (MeLuDI v.1.2.4 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.2.4.
3:35 PM Milestone MeLuDI v1.2.4 completed
Updates of the MeLuDI extension to BASE, a package of registration …
3:33 PM Ticket #777 (MeLuDI v.1.2.3 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.2.4 has been created.
3:30 PM PluginDownload edited by olle
Added information on MeLuDI 1.2.4 (diff)
2:58 PM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.2.4 (diff)
2:53 PM meludi-1.2.4.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.2.4
2:44 PM Changeset [3346] by nicklas
Tagging release 1.2.4
1:47 PM Changeset [3345] by olle
Refs #777. Updates due to version number change to "1.2.4". 1. …
1:42 PM Changeset [3344] by olle
Refs #777. MeLuDI updated to report id values in error message if …
1:30 PM Ticket #785 (Separate project archive folder for external samples) created by nicklas
The library preparation/sequencing wizards have support for processing …
1:29 PM Changeset [3343] by olle
Refs #777. MeLuDI updated to report id values in error message if …
1:08 PM Milestone Reggie v3.3.3 completed
1:01 PM Changeset [3342] by nicklas
Merge Reggie 3.3.3 to the trunk.
12:59 PM PluginDownload edited by nicklas
Released Reggie 3.3.3 (diff)
12:59 PM net.sf.basedb.reggie edited by nicklas
Released Reggie 3.3.3 (diff)
12:57 PM reggie-3.3.3.tar.gz attached to net.sf.basedb.reggie by nicklas
Reggie 3.3.3
12:56 PM Changeset [3341] by nicklas
Tagging Reggie 3.3.3
12:55 PM Changeset [3340] by nicklas
Preparing to release Reggie 3.3.3.
12:47 PM Ticket #784 (Can't create new histology work list) closed by nicklas
fixed: (In [3339]) Fixes #784: Can't create new histology work list The …
12:47 PM Changeset [3339] by nicklas
Fixes #784: Can't create new histology work list The query for …
8:49 AM Ticket #784 (Can't create new histology work list) created by nicklas
Start the "Lab tracking protocol for FFPE/HE" wizard and click the …
7:52 AM Changeset [3338] by olle
Refs #770. Retraction wizard updated in destruction part by commenting …

May 18, 2015:

4:22 PM Changeset [3337] by olle
Refs #770. Retraction wizard updated with first version of the …

May 13, 2015:

1:11 PM Changeset [3336] by olle
Refs #777. MeLuDI Lab Tracking Sheet/Report layout update: a. …
12:03 PM Changeset [3335] by olle
Refs #777. Bug fixed that prevented import of concentration values …
9:27 AM Changeset [3334] by olle
Refs #770. Java class/file RetractionServlet.java in …
8:12 AM Changeset [3333] by olle
Refs #770. Java class/file RetractionServlet.java in …

May 12, 2015:

12:42 PM Changeset [3332] by olle
Refs #777. MeLuDI updated in step 2 of DNA/RNA …
12:17 PM Changeset [3331] by olle
Refs #777. Javascript file extraction_formcopy.js in …
9:12 AM Ticket #783 (Switch to Java 8) created by nicklas
BASE 3.6 is moving on to Java 8 (http://base.thep.lu.se/ticket/1926). …
9:10 AM Ticket #782 (Fix compilation error when compiling against BASE 3.6) created by nicklas
When compiling Reggie against the BASE 3.6 JAR files we get 2 errors …
8:51 AM Ticket #764 (Support for neoprep in the library preparation) closed by nicklas
fixed
8:51 AM Changeset [3330] by nicklas
References #764: Support for neoprep in the library preparation …
8:10 AM Ticket #773 (The mRNA wizard must be smarter when auto-selecting pre-normalized RNA) closed by nicklas
fixed
8:09 AM Ticket #762 (Pre-normalization changes due to NeoPrep) closed by nicklas
fixed
8:09 AM net.sf.basedb.reggie/notes34 edited by nicklas
Adding update notes related to ticket #762 (diff)

May 11, 2015:

4:36 PM Changeset [3329] by olle
Refs #777. MeLuDI Lab Tracking Sheet/Report updated by replacing the …
2:42 PM Changeset [3328] by olle
Refs #777. MeLuDI Lab Tracking Sheet/Report table updated by making …
1:36 PM Ticket #776 (An old storage box position can be re-used for new specimens) closed by nicklas
fixed: (In [3327]) Fixes #776: An old storage box position can be re-used for …
1:36 PM Changeset [3327] by nicklas
Fixes #776: An old storage box position can be re-used for new …
1:17 PM Changeset [3326] by olle
Refs #777. MeLuDI Lab Tracking Sheet/Report? table updated by making …
12:58 PM Changeset [3325] by nicklas
References #781: Clean up code in retraction wizard Removed code that …
12:35 PM Changeset [3324] by olle
Refs #777. MeLuDI updated in DNA/RNA registration/quantification …
11:29 AM Changeset [3323] by nicklas
References #781: Clean up code in retraction wizard Merged …
10:58 AM Changeset [3322] by nicklas
References #780: Redesign Reggie start page Updated start page to the …
9:32 AM Changeset [3321] by nicklas
References #764: Support for neoprep in the library preparation …
9:05 AM Changeset [3320] by nicklas
References #764: Support for neoprep in the library preparation …
8:38 AM Ticket #781 (Clean up code in retraction wizard) created by nicklas
The two servlets used by the retraction wizards …
7:58 AM Changeset [3319] by nicklas
References #764: Support for neoprep in the library preparation …

May 8, 2015:

12:36 PM Changeset [3318] by olle
Refs #777. MeLuDI updated to store all input information, when a case …
11:47 AM Ticket #780 (Redesign Reggie start page) created by nicklas
The start page is becoming unbalanced with a lot of wizards in the …
11:30 AM Changeset [3317] by nicklas
References #764: Support for neoprep in the library preparation …
9:51 AM Changeset [3316] by nicklas
References #764: Support for neoprep in the library preparation The …
7:58 AM Changeset [3315] by nicklas
References #764: Support for neoprep in the library preparation …

May 7, 2015:

3:57 PM Ticket #779 (Librararies with very high molarity gives "Low molarity" warning in ...) closed by nicklas
fixed: (In [3314]) Fixes #779: Librararies with very high molarity gives "Low …
3:57 PM Changeset [3314] by nicklas
Fixes #779: Librararies with very high molarity gives "Low molarity" …
3:42 PM Ticket #779 (Librararies with very high molarity gives "Low molarity" warning in ...) created by nicklas
The current theory is that the high molarity results in such a small …
2:59 PM Changeset [3313] by olle
Refs #777. Javascript file edit_dnarna_edit.js in …
2:29 PM Changeset [3312] by olle
Refs #777. MeLuDI updated in the DNA/RNA registration/quantification …
12:41 PM Changeset [3311] by olle
Refs #777. MeLuDI updated in DNA/RNA extraction wizards to display …
9:28 AM Changeset [3310] by nicklas
References #764: Support for neoprep in the library preparation …

May 6, 2015:

1:30 PM Changeset [3309] by nicklas
References #764: Support for neoprep in the library preparation …
8:08 AM Changeset [3308] by nicklas
References #764: Support for neoprep in the library preparation …

May 5, 2015:

2:14 PM TracUpgrade edited by trac
(diff)
2:14 PM TracIni edited by trac
(diff)
2:14 PM TracFineGrainedPermissions edited by trac
(diff)
2:14 PM WikiFormatting edited by trac
(diff)
2:14 PM TracRoadmap edited by trac
(diff)
2:14 PM TracStandalone edited by trac
(diff)
2:14 PM TracLinks edited by trac
(diff)
2:14 PM TracLogging edited by trac
(diff)
2:14 PM WikiPageNames edited by trac
(diff)
2:14 PM TracAccessibility edited by trac
(diff)
2:14 PM TracEnvironment edited by trac
(diff)
2:14 PM TracModWSGI edited by trac
(diff)
2:14 PM TracBackup edited by trac
(diff)
2:14 PM TracInstall edited by trac
(diff)
2:14 PM TracTicketsCustomFields edited by trac
(diff)
2:14 PM TracAdmin edited by trac
(diff)
2:14 PM WikiRestructuredTextLinks edited by trac
(diff)
2:14 PM TracUnicode edited by trac
(diff)
2:14 PM TracNavigation edited by trac
(diff)
2:14 PM WikiProcessors edited by trac
(diff)
2:14 PM TracGuide edited by trac
(diff)
2:14 PM InterTrac edited by trac
(diff)
2:14 PM TracSupport edited by trac
(diff)
2:14 PM TracSearch edited by trac
(diff)
2:14 PM TracRevisionLog edited by trac
(diff)
2:14 PM TracTimeline edited by trac
(diff)
2:14 PM TracChangeset edited by trac
(diff)
2:14 PM TracImport edited by trac
(diff)
2:14 PM SandBox edited by trac
(diff)
2:14 PM CamelCase edited by trac
(diff)
2:14 PM WikiRestructuredText edited by trac
(diff)
2:14 PM TracSyntaxColoring edited by trac
(diff)
2:14 PM TracFastCgi edited by trac
(diff)
2:14 PM TracBatchModify created by trac
2:14 PM WikiNewPage edited by trac
(diff)
2:14 PM WikiDeletePage edited by trac
(diff)
2:14 PM TracBrowser edited by trac
(diff)
2:14 PM InterWiki edited by trac
(diff)
2:14 PM TracPermissions edited by trac
(diff)
2:14 PM TracPlugins edited by trac
(diff)
2:14 PM WikiHtml edited by trac
(diff)
2:14 PM WikiMacros edited by trac
(diff)
2:14 PM TracNotification edited by trac
(diff)
2:14 PM TracTickets edited by trac
(diff)
2:14 PM TracInterfaceCustomization edited by trac
(diff)
2:14 PM TracCgi edited by trac
(diff)
2:14 PM TracQuery edited by trac
(diff)
2:14 PM TracWorkflow edited by trac
(diff)
2:14 PM PageTemplates edited by trac
(diff)
2:14 PM TracWiki edited by trac
(diff)
2:14 PM TracRss edited by trac
(diff)
2:14 PM TracRepositoryAdmin created by trac
2:14 PM TracModPython edited by trac
(diff)
2:14 PM TracReports edited by trac
(diff)
8:25 AM Changeset [3307] by nicklas
Merge Reggie 3.3.2 to the trunk.
8:24 AM PluginDownload edited by nicklas
Released Reggie 3.3.2 (diff)
8:23 AM net.sf.basedb.reggie edited by nicklas
Released Reggie 3.3.2 (diff)
8:22 AM reggie-3.3.2.tar.gz attached to net.sf.basedb.reggie by nicklas
Reggie 3.3.2
8:20 AM Changeset [3306] by nicklas
Tagging Reggie 3.3.2
8:20 AM Milestone Reggie v3.3.2 completed
8:20 AM Changeset [3305] by nicklas
Preparing to release Reggie 3.3.2
8:17 AM Ticket #778 (Can't create manual pool when there is no plate waiting) closed by nicklas
fixed: (In [3304]) Fixes #778: Can't create manual pool when there is no …
8:17 AM Changeset [3304] by nicklas
Fixes #778: Can't create manual pool when there is no plate waiting …

May 4, 2015:

3:49 PM Ticket #778 (Can't create manual pool when there is no plate waiting) created by nicklas
The "Create manual pool" button is not available when starting the …
2:42 PM net.sf.basedb.reggie/notes34 created by nicklas
Preparing update notes for Reggie 3.4
2:33 PM Changeset [3303] by nicklas
References #764: Support for neoprep in the library preparation …
12:52 PM Changeset [3302] by nicklas
References #764: Support for neoprep in the library preparation …
10:37 AM Changeset [3301] by nicklas
References #764: Support for neoprep in the library preparation …
9:15 AM Changeset [3300] by nicklas
References #764: Support for neoprep in the library preparation Added …
8:32 AM Changeset [3299] by nicklas
References #764: Support for neoprep in the library preparation Fixes …

Apr 30, 2015:

2:42 PM Changeset [3298] by olle
Refs #777 Updates due to version number change to "1.3-dev". 1. …
2:36 PM Ticket #777 (MeLuDI v.1.2.3 bug fixes and improvements) created by olle
This ticket covers bug fixes and improvements to MeLuDI v.1.2.3.
2:33 PM Milestone MeLuDI v1.2.3 completed
Updates of the MeLuDI extension to BASE, a package of registration …
2:21 PM PluginDownload edited by olle
Added information on MeLuDI 1.2.3 (diff)
2:19 PM net.sf.basedb.meludi edited by olle
Changing the README link to tag 1.2.3 (diff)
2:17 PM net.sf.basedb.meludi edited by olle
Added information on MeLuDI 1.2.3 (diff)
2:12 PM Changeset [3297] by nicklas
References #764: Support for neoprep in the library preparation …
2:12 PM Changeset [3296] by olle
Creating MeLuDI tag 1.2.3
2:06 PM meludi-1.2.3.tar.gz attached to net.sf.basedb.meludi by olle
MeLuDI BASE extension package version 1.2.3
1:55 PM Changeset [3295] by olle
Refs #768. Java servlet class/file SpecimenTubeServlet.java in …
1:42 PM Ticket #768 (MeLuDI v.1.2.2 bug fixes and improvements) closed by olle
fixed: Ticket closed as MeLuDI version 1.2.3 has been created.
1:39 PM Changeset [3294] by olle
Refs #768. Updates due to version number change to "1.2.3". 1. …
1:32 PM Changeset [3293] by olle
Refs #768. MeLuDI updated in DNA/RNA extraction wizards and Lab …
11:51 AM Changeset [3292] by olle
Refs #768. MeLuDI updated when finding unprocessed specimen tubes to …
11:31 AM Changeset [3291] by olle
Refs #768. MeLuDI updated in Lab tracking sheet/report by removing …
10:56 AM Changeset [3290] by nicklas
References #764: Support for neoprep in the library preparation …
9:40 AM Changeset [3289] by nicklas
References #764: Support for neoprep in the library preparation Added …
9:08 AM Changeset [3288] by nicklas
References #764: Support for neoprep in the library preparation …
9:05 AM Changeset [3287] by olle
Refs #768. MeLuDI updated by fixing bugs regarding finding storage …
8:05 AM Ticket #776 (An old storage box position can be re-used for new specimens) created by nicklas
If a specimen located in position I9 of a box is scheduled for …

Apr 29, 2015:

2:52 PM Changeset [3286] by nicklas
References #764: Support for neoprep in the library preparation …
2:39 PM Changeset [3285] by olle
Refs #768. MeLuDI updated to not fill in gaps, when finding storage …
2:22 PM Changeset [3284] by nicklas
References #764: Support for neoprep in the library preparation …
11:58 AM Changeset [3283] by olle
Refs #768. MeLuDI updated in DNA/RNA registration/quantification …
11:58 AM Changeset [3282] by nicklas
Merging Reggie 3.3.1 to the trunk.
11:55 AM Milestone Reggie v3.3.1 completed
11:55 AM PluginDownload edited by nicklas
Released Reggie 3.3.1 (diff)
11:54 AM net.sf.basedb.reggie edited by nicklas
Released Reggie 3.3.1 (diff)
11:53 AM reggie-3.3.1.tar.gz attached to net.sf.basedb.reggie by nicklas
Reggie 3.3.1
11:53 AM Changeset [3281] by nicklas
Tagging Reggie 3.3.1
11:52 AM Changeset [3280] by nicklas
Preparing to release Reggie 3.3.1
11:50 AM Ticket #774 (Comment for bioplate in mRNA registration is not updated) closed by nicklas
fixed: (In [3279]) Fixes #774: Comment for bioplate in mRNA registration is …
11:50 AM Changeset [3279] by nicklas
Fixes #774: Comment for bioplate in mRNA registration is not updated
11:41 AM Ticket #775 (Histology scoring wizard does not work) closed by nicklas
fixed: (In [3278]) Fixes #775: Histology scoring wizard does not work …
11:41 AM Changeset [3278] by nicklas
Fixes #775: Histology scoring wizard does not work Removed the exta space.
11:26 AM Changeset [3277] by nicklas
Creating branch for Reggie 3.3.x bugfixes.
11:22 AM Ticket #775 (Histology scoring wizard does not work) created by nicklas
It is not possible to register scores in the Histology wizard. To …
9:45 AM Changeset [3276] by olle
Refs #768. MeLuDI updated to create DNA and RNA extract items for …

Apr 28, 2015:

11:28 AM Ticket #774 (Comment for bioplate in mRNA registration is not updated) created by nicklas
Seems like the bug in #713 also exists in the mRNA registration wizard.

Apr 24, 2015:

12:15 PM Changeset [3275] by olle
Refs #768. MeLuDI updated with bug fix in NanoDrop sample ID file …
10:05 AM Changeset [3274] by olle
Refs #768. MeLuDI updated by removal of annotation type …

Apr 23, 2015:

2:37 PM Changeset [3273] by nicklas
References #762: Pre-normalization changes due to NeoPrep? The mRNA …
1:56 PM Changeset [3272] by nicklas
References #773: The mRNA wizard must be smarter when auto-selecting …
12:46 PM Changeset [3271] by olle
Refs #768. MeLuDI updated in DNA/RNA registration/quantification …
11:56 AM Changeset [3270] by nicklas
References #773: The mRNA wizard must be smarter when auto-selecting …
9:18 AM Changeset [3269] by nicklas
References #762: Pre-normalization changes due to NeoPrep? Added new …
8:12 AM Changeset [3268] by olle
Refs #768. Bugs fixed in DNA/RNA registration/quantification wizard …

Apr 22, 2015:

11:56 AM Ticket #769 (Retraction wizard - Additions to Step 2: Follow up) closed by olle
fixed: Ticket closed since the desired functionality has been added.
11:43 AM Ticket #773 (The mRNA wizard must be smarter when auto-selecting pre-normalized RNA) created by nicklas
If the 'Pre-normalized RNA' option is selected in the auto-select …
9:11 AM Ticket #772 (New sample annotation (LinkedSpecimen) to highlight prior specimen) created by nicklas
The current SCANB BASE model permit a patient to have up to 2 cases …
9:03 AM Ticket #771 (Yellow label highlighting a representative specimen) created by nicklas
A new annotation named YellowLabel for samples of subtype Specimen. …
8:21 AM Ticket #763 (Change limit for NotEnoughRemaininQuantity flag in the extraction wizard) closed by nicklas
fixed: (In [3267]) Fixes #763: Change limit for NotEnoughRemaininQuantity?
8:21 AM Changeset [3267] by nicklas
Fixes #763: Change limit for NotEnoughRemaininQuantity? flag in the …

Apr 21, 2015:

2:57 PM Changeset [3266] by olle
Refs #769. Bug fix in Javascript file retraction_followup_form.js in …
2:44 PM Changeset [3265] by olle
Refs #769. Follow-up step of retraction wizard updated by addition of …
8:50 AM net.sf.basedb.print edited by nicklas
(diff)
8:50 AM PluginDownload edited by nicklas
Released Print package 1.3 (diff)
8:50 AM Changeset [3264] by nicklas
Preparing for future Print package 1.4
8:49 AM Milestone Print package v1.3 completed
See Print package extension page for more …
8:48 AM net.sf.basedb.print edited by nicklas
Released Print package 1.3 (diff)
8:47 AM base-print-1.3.tar.gz attached to net.sf.basedb.print by nicklas
Print package 1.3
8:47 AM Changeset [3263] by nicklas
Tagging Print extension 1.3
8:46 AM Changeset [3262] by nicklas
Preparing to release Print extension 1.3
8:45 AM Changeset [3261] by nicklas
Preparing for future release Reggie 3.4
8:43 AM Milestone Reggie v3.3 completed
See Reggie extension page for more information.
8:42 AM PluginDownload edited by nicklas
Released Reggie 3.3 (diff)
8:41 AM net.sf.basedb.reggie edited by nicklas
Released Reggie 3.5 (diff)
8:39 AM reggie-3.3.tar.gz attached to net.sf.basedb.reggie by nicklas
Reggie 3.3
8:38 AM Ticket #750 (Changes required for BASE version 3.5) closed by nicklas
fixed
8:37 AM Changeset [3260] by nicklas
Tagging Reggie 3.3
8:37 AM Changeset [3259] by nicklas
Preparing to release Reggie 3.3

Apr 20, 2015:

11:50 AM Ticket #770 (Retraction wizard - Step 3: Destruction) created by olle
Retraction wizard steps: 1. [Ticket #526] Marking extracts for …
11:22 AM Ticket #769 (Retraction wizard - Additions to Step 2: Follow up) created by olle
Retraction wizard steps: 1. [Ticket #526] Marking extracts for …
Note: See TracTimeline for information about the timeline view.