Timeline
Aug 15, 2014:
- 2:56 PM Tickets #547,593 batch updated by
- (In [2582]) References #547 and #593. Use temp folder provided by the …
- 2:56 PM Changeset [2582] by
- References #547 and #593. Use temp folder provided by the grid …
- 1:19 PM Ticket #547 (Start Demux and Merge) updated by
- (In [2581]) References #547: Start Demux and Merge Use different …
- 1:19 PM Changeset [2581] by
- References #547: Start Demux and Merge Use different number of tiles …
- 9:38 AM Ticket #593 (Start masking and alignment) updated by
- (In [2580]) References #593: Start masking and alignment Use …
- 9:38 AM Changeset [2580] by
- References #593: Start masking and alignment Use temporary filter in …
- 9:36 AM Ticket #547 (Start Demux and Merge) updated by
- (In [2579]) References #547: Start Demux and Merge Use temporary …
- 9:36 AM Changeset [2579] by
- References #547: Start Demux and Merge Use temporary filter in …
- 9:34 AM Ticket #595 (Confirm alignment) updated by
- (In [2578]) References #595: Confirm alignment Linkf generated files …
- 9:34 AM Changeset [2578] by
- References #595: Confirm alignment Linkf generated files with the …
- 8:02 AM Ticket #548 (Register Demux and Merge as ended) updated by
- (In [2577]) References #548: Register Demux and Merge as ended To …
- 8:02 AM Changeset [2577] by
- References #548: Register Demux and Merge as ended To avoid too many …
Aug 14, 2014:
- 3:48 PM Ticket #618 (Specimen tube item is registered with incorrect name) closed by
- fixed: (In [2576]) Fixes #618: Specimen tube item is registered with …
- 3:48 PM Changeset [2576] by
- Fixes #618: Specimen tube item is registered with incorrect name
- 3:47 PM Ticket #618 (Specimen tube item is registered with incorrect name) updated by
-
Summary changed
- 3:45 PM Ticket #618 (Specimen tube item is registered with incorrect name) created by
- In rare cases a specimen tube can be named incorrectly: 1. Register …
- 1:29 PM Ticket #595 (Confirm alignment) updated by
- (In [2575]) References #595: Confirm alignment Do not need to open 2 …
- 1:29 PM Changeset [2575] by
- References #595: Confirm alignment Do not need to open 2 DbControl:s.
- 9:41 AM Ticket #595 (Confirm alignment) updated by
- (In [2574]) References #595: Confirm alignment Better progress …
- 9:41 AM Changeset [2574] by
- References #595: Confirm alignment Better progress reporting during …
- 8:54 AM Ticket #595 (Confirm alignment) updated by
- (In [2573]) References #595: Confirm alignment Changes related to …
- 8:54 AM Changeset [2573] by
- References #595: Confirm alignment Changes related to [2566] due to …
Aug 13, 2014:
- 3:51 PM Ticket #617 (Re-use server connections within a transaction) updated by
- (In [2572]) References #617: Re-use server connections within a …
- 3:51 PM Changeset [2572] by
- References #617: Re-use server connections within a transaction …
- 11:31 AM Ticket #617 (Re-use server connections within a transaction) updated by
- (In [2571]) References #617: Re-use server connections within a …
- 11:31 AM Changeset [2571] by
- References #617: Re-use server connections within a transaction …
- 11:02 AM Ticket #617 (Re-use server connections within a transaction) updated by
- This turned out to be a bit more complicated than expected. The idea …
Aug 12, 2014:
- 8:33 AM Ticket #617 (Re-use server connections within a transaction) created by
- The current implementation opens a new connection for each remote file …
Aug 11, 2014:
- 2:43 PM Ticket #548 (Register Demux and Merge as ended) updated by
- (In [2570]) References #548: Register Demux and Merge as ended …
- 2:43 PM Changeset [2570] by
- References #548: Register Demux and Merge as ended Register FASTQ …
- 2:36 PM Ticket #616 (External files with a file server can't be downloaded) closed by
- fixed: (In [2569]) Fixes #616: External files with a file server can't be …
- 2:36 PM Changeset [2569] by
- Fixes #616: External files with a file server can't be downloaded
- 2:17 PM Ticket #616 (External files with a file server can't be downloaded) created by
- There is a bug in the FTP server when trying to download an external …
- 10:55 AM Ticket #593 (Start masking and alignment) updated by
- (In [2568]) References #593: Start masking and alignment Changes …
- 10:55 AM Changeset [2568] by
- References #593: Start masking and alignment Changes related to …
- 10:48 AM Changeset [2567] by
- Removing scripts that are no longer used by reggie.
- 10:34 AM Ticket #547 (Start Demux and Merge) updated by
- (In [2566]) References #547: Start Demux and Merge Specify project …
- 10:34 AM Changeset [2566] by
- References #547: Start Demux and Merge Specify project name in the …
- 8:36 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
- (In [2565]) References #533: Add secondary analysis section to Reggie …
- 8:36 AM Changeset [2565] by
- References #533: Add secondary analysis section to Reggie Installing …
Aug 8, 2014:
- 12:51 PM Ticket #533 (Add secondary analysis section to Reggie) updated by
- (In [2564]) References #533: Add secondary analysis section to Reggie …
- 12:51 PM Changeset [2564] by
- References #533: Add secondary analysis section to Reggie Forgot this …
- 11:58 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
- (In [2563]) References #533: Add secondary analysis section to Reggie …
- 11:58 AM Changeset [2563] by
- References #533: Add secondary analysis section to Reggie Use …
- 8:01 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
- (In [2562]) References #533: Add secondary analysis section to Reggie …
- 8:01 AM Changeset [2562] by
- References #533: Add secondary analysis section to Reggie Installing …
Aug 7, 2014:
- 3:33 PM Ticket #548 (Register Demux and Merge as ended) updated by
- (In [2561]) References #548: Register Demux and Merge as ended …
- 3:33 PM Changeset [2561] by
- References #548: Register Demux and Merge as ended checkMd5 …
Aug 6, 2014:
- 2:11 PM Tickets #547,593 batch updated by
- (In [2560]) References #547 and #593. Do not use more threads than the …
- 2:11 PM Changeset [2560] by
- References #547 and #593. Do not use more threads than the number of …
- 12:55 PM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- (In [2559]) References #614: Improve error handling when executing …
- 12:55 PM Changeset [2559] by
- References #614: Improve error handling when executing jobs on the …
- 12:50 PM Changeset [2558] by
- Forgot to execute the last samtools command
Aug 5, 2014:
- 3:59 PM Changeset [2557] by
- Added 'alignment_statisics.sh' which replaces the …
- 3:58 PM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- (In [2556]) References #614: Improve error handling when executing …
- 3:58 PM Changeset [2556] by
- References #614: Improve error handling when executing jobs on the …
- 2:52 PM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- samtools Seems like only error messages go to stderr and exit …
- 2:39 PM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- (In [2555]) References #614: Improve error handling when executing …
- 2:39 PM Changeset [2555] by
- References #614: Improve error handling when executing jobs on the …
- 11:19 AM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- (In [2554]) References #614: Improve error handling when executing …
- 11:19 AM Changeset [2554] by
- References #614: Improve error handling when executing jobs on the …
- 9:39 AM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- (In [2553]) References #614: Improve error handling when executing …
- 9:39 AM Changeset [2553] by
- References #614: Improve error handling when executing jobs on the …
- 8:52 AM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- tophat All interesting output is going to files in a folder …
- 8:12 AM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- (In [2552]) References #614: Improve error handling when executing …
- 8:12 AM Changeset [2552] by
- References #614: Improve error handling when executing jobs on the …
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