Timeline
Jul 10, 2014:
- 4:41 PM Changeset [2551] by
- 4:40 PM Changeset [2550] by
- 4:40 PM Changeset [2549] by
- 4:39 PM Changeset [2548] by
- Registration extension for Melanoma/Lung cancer project.
Jul 4, 2014:
- 7:54 AM Changeset [2547] by
- Preparing for future release LabEnv v1.3: 1. Ant build file …
Jul 3, 2014:
- 6:00 PM Milestone LabEnv v1.2 completed
- Further update of the LabEnv extension to BASE, a package allowing …
- 4:39 PM net.sf.basedb.labenv edited by
- LabEnv info page updated with data for version 1.2. (diff)
- 4:11 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) closed by
- fixed: Ticket closed as stability and bug issues in LabEnv v1.1 at the time …
- 4:01 PM Changeset [2546] by
- Tagging release 1.2
- 3:39 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- (In [2545]) Refs #615. Lab environment extension updated by setting …
- 3:39 PM Changeset [2545] by
- Refs #615. Lab environment extension updated by setting version number …
- 3:34 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- (In [2544]) Refs #615. Lab environment extension updated by setting …
- 3:34 PM Changeset [2544] by
- Refs #615. Lab environment extension updated by setting version number …
- 3:31 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
-
(In [2543]) Refs #615. Configuration file
META-INF/extensions.xml… - 3:31 PM Changeset [2543] by
-
Refs #615. Configuration file
META-INF/extensions.xmlupdated by … - 3:23 PM Ticket #608 (Update Labenv to new scripting pattern) updated by
-
Description, Milestone changed
Moved ticket to LabEnv v1.3. - 3:22 PM Ticket #606 (Switch to JDOM 2) updated by
-
Milestone changed
Moved ticket to LabEnv v1.3. - 3:04 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- (In [2542]) Refs #615. Lab environment extension updated in …
- 3:04 PM Changeset [2542] by
- Refs #615. Lab environment extension updated in installation …
- 2:45 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- (In [2541]) Refs #615. Lab environment extension updated with better …
- 2:45 PM Changeset [2541] by
- Refs #615. Lab environment extension updated with better error support …
- 2:27 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- (In [2540]) Refs #615. Lab environment extension updated to handle odd …
- 2:27 PM Changeset [2540] by
- Refs #615. Lab environment extension updated to handle odd lab sensor …
- 2:19 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- Debug output has revealed that lab sensors might produce output where …
- 1:48 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- (In [2539]) Refs #615. Lab environment extension service updated to …
- 1:48 PM Changeset [2539] by
- Refs #615. Lab environment extension service updated to hopefully …
- 1:38 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- LabEnv stability discussion: * The lab environment extension …
- 12:32 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
- Traceability note: * The lab environment extension was introduced in …
- 12:27 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) updated by
-
Status changed
Ticket accepted. - 12:26 PM Ticket #615 (Lab environment extension stability improvement and bug fixes for v1.1) created by
- Lab environment extension stability improvement and bug fixes for v1.1 …
- 11:26 AM Ticket #610 (Mail server prints debug output as default) closed by
- fixed: Ticket closed since the mail server debug output has been turned off.
Jul 2, 2014:
- 2:31 PM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- (In [2538]) References #614: Improve error handling when executing …
- 2:31 PM Changeset [2538] by
- References #614: Improve error handling when executing jobs on the …
- 2:28 PM Changeset [2537] by
- Adding wrapper script for directing output to stderr or stdout …
- 2:26 PM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- I have tested one idea with a wrapper script that starts a program …
- 9:53 AM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- bowtie2 May not detect all errors. For example, if the FASTQ …
- 8:47 AM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- Trimmomatic The exit code for Trimmomatic seems to behave as …
- 8:37 AM Ticket #614 (Improve error handling when executing jobs on the cluster) updated by
- Picard The exit code for Picard seems to behave as expected. …
- 8:27 AM Ticket #614 (Improve error handling when executing jobs on the cluster) created by
- Error handling is important for the functionality of the …
Jul 1, 2014:
- 3:30 PM Ticket #613 (Auto-detect tab or comma in Caliper-files) closed by
- fixed: (In [2536]) Fixes #613: Auto-detect tab or comma in Caliper-files
- 3:30 PM Changeset [2536] by
- Fixes #613: Auto-detect tab or comma in Caliper-files
- 2:37 PM Ticket #613 (Auto-detect tab or comma in Caliper-files) created by
- It is not uncommon that Caliper Well table files need to be manually …
- 11:55 AM Ticket #593 (Start masking and alignment) updated by
- (In [2535]) References #593: Start masking and alignment Reset …
- 11:55 AM Changeset [2535] by
-
References #593: Start masking and alignment
Reset
AutoProcessing…
Jun 30, 2014:
- 9:07 AM Ticket #533 (Add secondary analysis section to Reggie) updated by
- (In [2534]) References #533 and BASE ticket …
- 9:07 AM Changeset [2534] by
- References #533 and BASE ticket http://base.thep.lu.se/ticket/1824. …
Jun 27, 2014:
- 8:38 AM net.sf.basedb.reggie edited by
- Reggie 2.16-alpha-1 (diff)
- 8:32 AM Changeset [2533] by
- Tagging Reggie 2.16-alpha-1
Jun 26, 2014:
- 4:30 PM Ticket #607 (Date /time format is different in configuration file and GUI) closed by
- fixed: Ticket closed since the lab extension configuration file now accepts …
- 4:27 PM Ticket #607 (Date /time format is different in configuration file and GUI) updated by
- (In [2532]) Refs #607. Lab environment extension configuration file …
- 4:27 PM Changeset [2532] by
- Refs #607. Lab environment extension configuration file updated to …
- 4:25 PM Ticket #607 (Date /time format is different in configuration file and GUI) updated by
- Design update: * The lab environment extension configuration file …
- 3:53 PM Ticket #607 (Date /time format is different in configuration file and GUI) updated by
- Traceability note: * The lab environment extension was introduced in …
- 3:53 PM Ticket #607 (Date /time format is different in configuration file and GUI) updated by
-
Status changed
Ticket accepted. - 12:18 PM Ticket #612 (LabEnv overview display shows wrong time offsets when the latest data ...) closed by
- fixed: Ticket closed as the added update seems to have fixed the problem.
- 12:11 PM Ticket #612 (LabEnv overview display shows wrong time offsets when the latest data ...) updated by
- (In [2531]) Refs #612. Lab environment extension updated to fix …
- 12:11 PM Changeset [2531] by
- Refs #612. Lab environment extension updated to fix problem with …
- 12:03 PM Ticket #612 (LabEnv overview display shows wrong time offsets when the latest data ...) updated by
-
Design update:
1. Class/file
LabEnvironmentDisplayServlet.javain … - 11:42 AM Ticket #612 (LabEnv overview display shows wrong time offsets when the latest data ...) updated by
- Problem discussion: The overview display was introduced in change set …
- 11:39 AM net.sf.basedb.ftp edited by
- Fixing broken link to apache ftp server documentation (diff)
- 9:31 AM Changeset [2530] by
- Preparing for future release Yubikey 1.2
- 9:29 AM Milestone YubiKey v1.1 completed
- See YubiKey authentication extension for …
- 9:28 AM PluginDownload edited by
- Released YubiKey 1.1 (diff)
- 9:27 AM net.sf.basedb.yubikey edited by
- Released YubiKey 1.1 (diff)
- 9:26 AM Changeset [2529] by
- Tagging Yubikey 1.1
- 9:25 AM Changeset [2528] by
- Preparing to release Yubikey 1.1
- 9:24 AM Changeset [2527] by
- Preparing for future release Xfiles 1.1
- 9:22 AM Milestone External files support 1.0 completed
- An extension package containing support for additional protocols to …
- 9:21 AM PluginDownload edited by
- Released Xfiles 1.0 (diff)
- 9:18 AM net.sf.basedb.xfiles edited by
- Released Xfiles 1.0 (diff)
- 9:15 AM Ticket #611 (Create package for supporting external files via SFTP) closed by
- fixed
- 9:15 AM Ticket #305 (Create package for supporting external files on FTP servers) closed by
- fixed
- 9:14 AM Changeset [2526] by
- Tagging xfiles 1.0
- 9:14 AM Changeset [2525] by
- Preparing to release xfiles 1.0
- 9:10 AM Ticket #612 (LabEnv overview display shows wrong time offsets when the latest data ...) updated by
- Traceability note: * The lab environment extension was introduced in …
- 9:09 AM Ticket #612 (LabEnv overview display shows wrong time offsets when the latest data ...) updated by
-
Status changed
Ticket accepted. - 9:09 AM Ticket #612 (LabEnv overview display shows wrong time offsets when the latest data ...) created by
- LabEnv overview display shows wrong time offsets when the latest data …
Jun 25, 2014:
- 2:55 PM net.sf.basedb.xfiles/using created by
- Created information about how to use this package
- 2:32 PM net.sf.basedb.xfiles edited by
- Added 'supported protocols' column to download table (diff)
- 2:27 PM net.sf.basedb.xfiles edited by
- Updated documentation links (diff)
- 2:25 PM net.sf.basedb.xfiles/install created by
- Created installation information for external files support package
- 2:22 PM Ticket #305 (Create package for supporting external files on FTP servers) updated by
- (In [2524]) References #305: Create package for supporting external …
- 2:22 PM Changeset [2524] by
- References #305: Create package for supporting external files on FTP …
- 1:46 PM Ticket #305 (Create package for supporting external files on FTP servers) updated by
- (In [2523]) References #305: Create package for supporting external …
- 1:46 PM Changeset [2523] by
- References #305: Create package for supporting external files on FTP …
- 1:45 PM Ticket #611 (Create package for supporting external files via SFTP) updated by
- (In [2522]) References #611: Create package for supporting external …
- 1:45 PM Changeset [2522] by
- References #611: Create package for supporting external files via SFTP …
- 9:35 AM Ticket #305 (Create package for supporting external files on FTP servers) updated by
- (In [2521]) References #305: Create package for supporting external …
- 9:35 AM Changeset [2521] by
- References #305: Create package for supporting external files on FTP …
- 8:45 AM Ticket #611 (Create package for supporting external files via SFTP) updated by
- (In [2520]) References #611: Create package for supporting external …
- 8:45 AM Changeset [2520] by
- References #611: Create package for supporting external files via SFTP …
- 8:25 AM Ticket #611 (Create package for supporting external files via SFTP) updated by
- (In [2519]) References #611: Create package for supporting external …
- 8:25 AM Changeset [2519] by
- References #611: Create package for supporting external files via SFTP …
Jun 24, 2014:
- 8:56 AM Ticket #611 (Create package for supporting external files via SFTP) updated by
- (In [2518]) References #611: Create package for supporting external …
- 8:56 AM Changeset [2518] by
- References #611: Create package for supporting external files via SFTP …
Jun 23, 2014:
- 2:41 PM Changeset [2517] by
- Initial setup of 'External files support package'.
- 2:19 PM Changeset [2516] by
- Adding tags and trunk folders to 'External files support package'
- 2:18 PM Changeset [2515] by
- Creating main folder for 'External files support package'
- 2:11 PM Ticket #305 (Create package for supporting external files on FTP servers) updated by
-
Component, Milestone, Owner changed
- 2:10 PM Ticket #611 (Create package for supporting external files via SFTP) updated by
-
Type, Component, Milestone, Owner changed
- 2:09 PM net.sf.basedb.xfiles created by
- Creating xfiles page
- 1:57 PM Ticket #611 (Create package for supporting external files via SFTP) updated by
-
Description, Summary changed
- 11:54 AM Ticket #611 (Create package for supporting external files via SFTP) created by
- A file item could register an external URL like: …
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