Timeline



Jun 5, 2014:

4:06 PM Milestone LabEnv v1.1 completed
An update of the LabEnv extension to BASE, a package allowing storage …
4:04 PM Ticket #592 (Lab environment extension improved report routines) closed by olle
fixed: Ticket closed as a the lab environment extension has been updated with …
3:42 PM Ticket #595 (Confirm alignment) updated by Nicklas Nordborg
(In [2499]) References #595: Confirm alignment Display PT_READS in …
3:42 PM Changeset [2499] by Nicklas Nordborg
References #595: Confirm alignment Display PT_READS in the …
3:41 PM Ticket #548 (Register Demux and Merge as ended) updated by Nicklas Nordborg
(In [2498]) References #548: Register Demux and Merge as ended …
3:41 PM Changeset [2498] by Nicklas Nordborg
References #548: Register Demux and Merge as ended Display PT_READS …
3:41 PM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2497]) References #547: Start Demux and Merge Added trimmomatic …
3:41 PM Changeset [2497] by Nicklas Nordborg
References #547: Start Demux and Merge Added trimmomatic to the …
3:31 PM labenv-1.1.tar.gz attached to net.sf.basedb.labenv by olle
LabEnv version 1.1 package
3:26 PM Changeset [2496] by Nicklas Nordborg
Adding svn properties
3:24 PM Changeset [2495] by Nicklas Nordborg
Adding wrapper for calling trimmomatic. Includes default settings for …
3:02 PM Changeset [2494] by olle
unwanted
2:55 PM Changeset [2493] by olle
Checking out tagged release LabEnv 1.1
2:48 PM net.sf.basedb.labenv edited by olle
LabEnv info page updated with data for version 1.1. (diff)
2:14 PM PluginDownload edited by Nicklas Nordborg
(diff)
2:14 PM PluginDownload edited by Nicklas Nordborg
Updated note about web service support. (diff)
2:10 PM net.sf.basedb.examples.webservices edited by Nicklas Nordborg
Updated note about web service support. (diff)
2:09 PM Changeset [2492] by olle
LabEnv tagged release 1.1
1:55 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2491]) Refs #592. Lab environment extension updated by setting …
1:55 PM Changeset [2491] by olle
Refs #592. Lab environment extension updated by setting version number …
1:43 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2490]) Refs #592. Configuration file META-INF/extensions.xml
1:43 PM Changeset [2490] by olle
Refs #592. Configuration file META-INF/extensions.xml updated by …
1:32 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2489]) Refs #592. Lab environment extension updated in versions …
1:32 PM Changeset [2489] by olle
Refs #592. Lab environment extension updated in versions of external …
1:29 PM Ticket #602 (Focus fields on the YubiKey tab) closed by Nicklas Nordborg
fixed: (In [2488]) Fixes #602: Focus fields on the YubiKey tab
1:29 PM Changeset [2488] by Nicklas Nordborg
Fixes #602: Focus fields on the YubiKey tab
1:26 PM Ticket #602 (Focus fields on the YubiKey tab) created by Nicklas Nordborg
When switching to the YubiKey tab in the edit user dialog it would be …
1:22 PM Ticket #601 (NullPointerException when trying to assign a YubiKey to a new user) closed by Nicklas Nordborg
fixed: (In [2487]) Fixes #601: NullPointerException when trying to assign a …
1:22 PM Changeset [2487] by Nicklas Nordborg
Fixes #601: NullPointerException when trying to assign a YubiKey to a …
11:21 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2486]) Refs #592. Lab environment extension updated in JSP files …
11:21 AM Changeset [2486] by olle
Refs #592. Lab environment extension updated in JSP files by removing …
11:03 AM Ticket #601 (NullPointerException when trying to assign a YubiKey to a new user) updated by Nicklas Nordborg
Description changed
11:02 AM Ticket #601 (NullPointerException when trying to assign a YubiKey to a new user) created by Nicklas Nordborg
Start creating a new user and then switch to the YubiKey tab. Instead …
8:56 AM Ticket #599 (YubiKey package is missing yubikey-extended-properties.xml) closed by Nicklas Nordborg
fixed: (In [2485]) Fixes #599: YubiKey package is missing …
8:56 AM Changeset [2485] by Nicklas Nordborg
Fixes #599: YubiKey package is missing yubikey-extended-properties.xml
8:54 AM Ticket #600 (Installation instructions for YubiKey extensions is not clear) closed by Nicklas Nordborg
fixed
8:54 AM net.sf.basedb.yubikey/install edited by Nicklas Nordborg
Fixes #600 (diff)
8:49 AM Ticket #600 (Installation instructions for YubiKey extensions is not clear) created by Nicklas Nordborg
Step 3: If this is a FIRST-TIME INSTALLATION go through the step …
8:10 AM net.sf.basedb.yubikey/install edited by Nicklas Nordborg
Add note about missing yubikey-extended-properties.xml (diff)
8:07 AM Ticket #599 (YubiKey package is missing yubikey-extended-properties.xml) created by Nicklas Nordborg
Workaround is to download this file from the subversion repository: …

Jun 4, 2014:

12:19 PM PluginDownload edited by Nicklas Nordborg
Updating information about new releases (diff)
12:16 PM Changeset [2484] by Nicklas Nordborg
Preparing for future release YubiKey 1.1
12:16 PM Milestone YubiKey v1.0 completed
Implementing an authentication module for YubiKey. …
12:15 PM net.sf.basedb.yubikey edited by Nicklas Nordborg
Released YubiKey 1.0 (diff)
12:08 PM yubikey-1.0.tar.gz attached to net.sf.basedb.yubikey by Nicklas Nordborg
YubiKey 1.0
12:07 PM Ticket #580 (Authenticate users using YubiKey sticks) closed by Nicklas Nordborg
fixed
12:07 PM Changeset [2483] by Nicklas Nordborg
Tagging YubiKey 1.0
12:06 PM Changeset [2482] by Nicklas Nordborg
Preparing to release Yubikey 1.0
12:00 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2481]) Refs #592. Lab environment extension updated for …
12:00 PM Changeset [2481] by olle
Refs #592. Lab environment extension updated for displaying lab …
11:45 AM Changeset [2480] by Nicklas Nordborg
Preparing for future release print package 1.2
11:44 AM Milestone Print package v1.1 completed
See Print package extension page for more …
11:43 AM net.sf.basedb.print edited by Nicklas Nordborg
Released print package 1.1 (diff)
11:42 AM base-print-1.1.tar.gz attached to net.sf.basedb.print by Nicklas Nordborg
Print package 1.1
11:42 AM Changeset [2479] by Nicklas Nordborg
Tagging print package 1.1
11:41 AM Changeset [2478] by Nicklas Nordborg
Preparing to release print package 1.1
11:38 AM Changeset [2477] by Nicklas Nordborg
Preparing for future release MeV launcher 1.12
11:34 AM Milestone MeV Launcher 1.11 completed
For more information see the [wiki:net.sf.basedb.mev MEV Launcher …
11:29 AM net.sf.basedb.mev edited by Nicklas Nordborg
Released MeV Launcher 1.11 (diff)
11:26 AM mev-launcher-1.11.tar.gz attached to net.sf.basedb.mev by Nicklas Nordborg
MeV Launcher 1.11
11:26 AM Changeset [2476] by Nicklas Nordborg
Tagging Mev launcher 1.11
11:25 AM Changeset [2475] by Nicklas Nordborg
Preparing to release MEV launvher 1.11
11:21 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2474]) Refs #592. Lab environment extension updated in XML file …
11:21 AM Changeset [2474] by olle
Refs #592. Lab environment extension updated in XML file …
11:20 AM Changeset [2473] by Nicklas Nordborg
Preparing for future release Ftp server 1.4
11:19 AM Milestone FTP Server v1.3 completed
For more information see the [wiki:net.sf.basedb.ftp FTP Server …
11:18 AM net.sf.basedb.ftp edited by Nicklas Nordborg
Released Ftp server 1.3 (diff)
11:17 AM base-ftpserver-1.3.tar.gz attached to net.sf.basedb.ftp by Nicklas Nordborg
BASE FTP Server Extension 1.3
11:16 AM Changeset [2472] by Nicklas Nordborg
Tagging Ftp server 1.3
11:15 AM Changeset [2471] by Nicklas Nordborg
Preparing to release Ftp server 1.3
11:13 AM Changeset [2470] by Nicklas Nordborg
Preparing for future release example code 1.7
11:12 AM Milestone Example code v1.6 completed
For more information see [wiki:net.sf.basedb.examplecode Example code …
11:11 AM net.sf.basedb.examplecode edited by Nicklas Nordborg
Released exemple code 1.6 (diff)
11:09 AM base-examples-1.6.tar.gz attached to net.sf.basedb.examplecode by Nicklas Nordborg
Example code 1.6
10:03 AM Changeset [2469] by Nicklas Nordborg
Tagging example code 1.6
10:01 AM Changeset [2468] by Nicklas Nordborg
Preparing to release example code 1.6

Jun 3, 2014:

8:22 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2467]) Refs #592. Lab environment extension updated for …
8:22 AM Changeset [2467] by olle
Refs #592. Lab environment extension updated for displaying lab …

Jun 2, 2014:

4:16 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2466]) Refs #592. Lab environment extension updated to report an …
4:16 PM Changeset [2466] by olle
Refs #592. Lab environment extension updated to report an alarm for …
4:10 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
Design update of alarm blocking: An alarm can be reported either when …
1:04 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2465]) Refs #592. Lab environment extension updated for weekly …
1:04 PM Changeset [2465] by olle
Refs #592. Lab environment extension updated for weekly and overview …
1:01 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
Design update of lab environment weekly and overview display reports: …
10:02 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2464]) References #547: Start Demux and Merge Do not set …
10:02 AM Changeset [2464] by Nicklas Nordborg
References #547: Start Demux and Merge Do not set TILE_LIMIT for …
9:59 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2463]) Refs #592. Lab environment extension updated to support …
9:59 AM Changeset [2463] by olle
Refs #592. Lab environment extension updated to support display of lab …
9:53 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
Design update to support display of lab environment data for a single …

May 28, 2014:

7:24 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2462]) Refs #592. Lab environment extension updated with a copy …
7:24 AM Changeset [2462] by olle
Refs #592. Lab environment extension updated with a copy of the Reggie …

May 26, 2014:

1:41 PM Ticket #598 (Pooling wizard can't show flag and warning at the same time) closed by Nicklas Nordborg
fixed: (In [2461]) Fixes #598: Pooling wizard can't show flag and warning at …
1:41 PM Changeset [2461] by Nicklas Nordborg
Fixes #598: Pooling wizard can't show flag and warning at the same …
1:09 PM Ticket #598 (Pooling wizard can't show flag and warning at the same time) created by Nicklas Nordborg
Libraries that get a warning due to low concentration or high adapter …
9:33 AM Ticket #593 (Start masking and alignment) updated by Nicklas Nordborg
(In [2460]) References #593: Start masking and alignment Improved …
9:32 AM Changeset [2460] by Nicklas Nordborg
References #593: Start masking and alignment Improved error handling …
9:08 AM Ticket #548 (Register Demux and Merge as ended) updated by Nicklas Nordborg
(In [2459]) References #548: Register Demux and Merge as ended Exit …
9:08 AM Changeset [2459] by Nicklas Nordborg
References #548: Register Demux and Merge as ended Exit script if the …

May 23, 2014:

1:44 PM Ticket #548 (Register Demux and Merge as ended) updated by Nicklas Nordborg
(In [2458]) References #548: Register Demux and Merge as ended …
1:44 PM Changeset [2458] by Nicklas Nordborg
References #548: Register Demux and Merge as ended Display failed …
1:21 PM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2457]) References #547: Start Demux and Merge Get rid of …
1:21 PM Changeset [2457] by Nicklas Nordborg
References #547: Start Demux and Merge Get rid of problematic …
1:11 PM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2456]) References #547: Start Demux and Merge Trim whitespace …
1:11 PM Changeset [2456] by Nicklas Nordborg
References #547: Start Demux and Merge Trim whitespace values from …
1:08 PM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2455]) References #547: Start Demux and Merge Avoid 'find' …
1:08 PM Changeset [2455] by Nicklas Nordborg
References #547: Start Demux and Merge Avoid 'find' command to choke …
11:28 AM Changeset [2454] by Nicklas Nordborg
Merging Reggie 2.15.2 to the trunk.
10:56 AM Milestone Reggie v2.15.2 completed
Adapter peak information in library registration and pooling wizards. …
10:54 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.15.2 (diff)
10:53 AM reggie-2.15.2.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.15.2
10:53 AM Changeset [2453] by Nicklas Nordborg
Tagging Reggie 2.15.2
10:52 AM Changeset [2452] by Nicklas Nordborg
Preparing to release Reggie 2.15.2
10:50 AM net.sf.basedb.reggie/notes2152 created by Nicklas Nordborg
Adding updated notes for Reggie 2.15.2
10:44 AM Ticket #596 (Import adapter peak information when registering libraries) closed by Nicklas Nordborg
fixed
10:44 AM Ticket #597 (Display adapter peak fraction in the pooling wizard) closed by Nicklas Nordborg
fixed
9:54 AM Ticket #597 (Display adapter peak fraction in the pooling wizard) updated by Nicklas Nordborg
(In [2451]) References #597: Display adapter peak fraction in the …
9:54 AM Changeset [2451] by Nicklas Nordborg
References #597: Display adapter peak fraction in the pooling wizard …
9:43 AM Ticket #597 (Display adapter peak fraction in the pooling wizard) updated by Nicklas Nordborg
(In [2450]) References #597: Display adapter peak fraction in the …
9:43 AM Changeset [2450] by Nicklas Nordborg
References #597: Display adapter peak fraction in the pooling wizard …

May 22, 2014:

4:05 PM Ticket #596 (Import adapter peak information when registering libraries) updated by Nicklas Nordborg
(In [2449]) References #596: Import adapter peak information when …
4:05 PM Changeset [2449] by Nicklas Nordborg
References #596: Import adapter peak information when registering …
2:08 PM Ticket #596 (Import adapter peak information when registering libraries) updated by Nicklas Nordborg
(In [2448]) References #596: Import adapter peak information when …
2:08 PM Changeset [2448] by Nicklas Nordborg
References #596: Import adapter peak information when registering …
12:59 PM Ticket #596 (Import adapter peak information when registering libraries) updated by Nicklas Nordborg
(In [2447]) References #596: Import adapter peak information when …
12:59 PM Changeset [2447] by Nicklas Nordborg
References #596: Import adapter peak information when registering …
12:38 PM Ticket #596 (Import adapter peak information when registering libraries) updated by Nicklas Nordborg
Status changed
12:34 PM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2446]) References #547: Start Demux and Merge Adding 'rm …
12:34 PM Changeset [2446] by Nicklas Nordborg
References #547: Start Demux and Merge Adding 'rm <tmp-folder>' back …
12:31 PM Ticket #596 (Import adapter peak information when registering libraries) updated by Nicklas Nordborg
Description changed
12:31 PM Ticket #597 (Display adapter peak fraction in the pooling wizard) created by Nicklas Nordborg
This is related to #596. The pooling wizard should display the …
12:00 PM Ticket #596 (Import adapter peak information when registering libraries) created by Nicklas Nordborg
The library registration wizard currently import values for the …
11:36 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2445]) References #547: Start Demux and Merge Use 'getFile' …
11:36 AM Changeset [2445] by Nicklas Nordborg
References #547: Start Demux and Merge Use 'getFile' instead of …
10:29 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2444]) Refs #592. Lab environment extension updated to hopefully …
10:29 AM Changeset [2444] by olle
Refs #592. Lab environment extension updated to hopefully make e-mail …
10:27 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2443]) References #547: Start Demux and Merge Generate .gz …
10:27 AM Changeset [2443] by Nicklas Nordborg
References #547: Start Demux and Merge Generate .gz compressed files …
8:48 AM Changeset [2442] by Nicklas Nordborg
Check enironment variable PicardMemory for amount of memory to give to …

May 20, 2014:

11:43 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2441]) References #547: Start Demux and Merge * Do not start …
11:43 AM Changeset [2441] by Nicklas Nordborg
References #547: Start Demux and Merge * Do not start multiple demux …

May 19, 2014:

3:37 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2440]) Refs #592. Lab environment extension updated by …
3:37 PM Changeset [2440] by olle
Refs #592. Lab environment extension updated by associating main "Lab …
1:45 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2439]) Refs #592. Lab environment extension updated in JSP files …
1:45 PM Changeset [2439] by olle
Refs #592. Lab environment extension updated in JSP files to have more …
1:15 PM Ticket #548 (Register Demux and Merge as ended) updated by Nicklas Nordborg
(In [2438]) References #548: Register Demux and Merge as ended Remove …
1:15 PM Changeset [2438] by Nicklas Nordborg
References #548: Register Demux and Merge as ended Remove job folder …
12:55 PM Ticket #548 (Register Demux and Merge as ended) updated by Nicklas Nordborg
(In [2437]) References #548: Register Demux and Merge as ended …
12:55 PM Changeset [2437] by Nicklas Nordborg
References #548: Register Demux and Merge as ended Display demux …
11:00 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2436]) References #547: Start Demux and Merge Do not skip last …
11:00 AM Changeset [2436] by Nicklas Nordborg
References #547: Start Demux and Merge Do not skip last base in …
10:54 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2435]) References #547: Start Demux and Merge Saving …
10:54 AM Changeset [2435] by Nicklas Nordborg
References #547: Start Demux and Merge Saving demultiplex_metrics …
9:11 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2434]) References #547: Start Demux and Merge Adding …
9:11 AM Changeset [2434] by Nicklas Nordborg
References #547: Start Demux and Merge Adding PF_NNNN_PCT, …

May 16, 2014:

4:39 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2433]) Refs #592. Lab environment extension updated in servlet to …
4:39 PM Changeset [2433] by olle
Refs #592. Lab environment extension updated in servlet to reduce the …
4:31 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2432]) Refs #592. Lab environment extension updated with first …
4:31 PM Changeset [2432] by olle
Refs #592. Lab environment extension updated with first version of …
12:31 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2431]) Refs #592. Lab environment extension updated in servlet, …
12:31 PM Changeset [2431] by olle
Refs #592. Lab environment extension updated in servlet, in order to …
8:12 AM Changeset [2430] by Nicklas Nordborg
Switched from illumina2bam_wrapper to picard for demultiplexing. …
8:10 AM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2429]) References #547: Start Demux and Merge Switched from …
8:10 AM Changeset [2429] by Nicklas Nordborg
References #547: Start Demux and Merge Switched from …
7:28 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2428]) Refs #592. Lab environment extension updated in header …
7:28 AM Changeset [2428] by olle
Refs #592. Lab environment extension updated in header title for …

May 15, 2014:

4:45 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2427]) Refs #592. Lab environment extension updated in layout of …
4:45 PM Changeset [2427] by olle
Refs #592. Lab environment extension updated in layout of alarm table: …
12:59 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
Test of alarm: * Set-up: The lab environment extension were …
11:30 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2426]) Refs #592. Lab environment extension updated in alarm text …
11:30 AM Changeset [2426] by olle
Refs #592. Lab environment extension updated in alarm text layout: …
7:39 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2425]) Refs #592. Lab environment extension updated in alarm …
7:39 AM Changeset [2425] by olle
Refs #592. Lab environment extension updated in alarm infra-structure …

May 14, 2014:

4:38 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2424]) Refs #592. Lab environment extension updated in alarm …
4:38 PM Changeset [2424] by olle
Refs #592. Lab environment extension updated in alarm infra-structure …
2:23 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
Design update of the lab environment alarm infra-structure: 1. Alarm …
8:47 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2423]) Refs #592. Lab environment extension updated in header …
8:47 AM Changeset [2423] by olle
Refs #592. Lab environment extension updated in header title for …

May 13, 2014:

3:40 PM Ticket #547 (Start Demux and Merge) updated by Nicklas Nordborg
(In [2422]) References #547: Start Demux and Merge Export barcode …
3:40 PM Changeset [2422] by Nicklas Nordborg
References #547: Start Demux and Merge Export barcode files needed by …
2:43 PM Changeset [2421] by Nicklas Nordborg
Renamed the 'filtered' step to 'masked'. See …
2:41 PM Tickets #533,​547,​548,​593,​595 batch updated by Nicklas Nordborg
(In [2420]) References #533, #547, #548, #593, #595. Renamed …
2:41 PM Changeset [2420] by Nicklas Nordborg
References #533, #547, #548, #593, #595. Renamed FilteredSequences
2:30 PM Ticket #593 (Start masking and alignment) updated by Nicklas Nordborg
Description changed
2:30 PM Ticket #593 (Start masking and alignment) updated by Nicklas Nordborg
Summary changed
8:37 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2419]) Refs #592. Lab environment extension updated to check …
8:37 AM Changeset [2419] by olle
Refs #592. Lab environment extension updated to check permission to …

May 12, 2014:

3:58 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2418]) Refs #592. Lab environment extension updated to only use a …
3:58 PM Changeset [2418] by olle
Refs #592. Lab environment extension updated to only use a fixed …
8:13 AM Ticket #595 (Confirm alignment) updated by Nicklas Nordborg
(In [2417]) References #595: Confirm alignment Saved files are …
8:13 AM Changeset [2417] by Nicklas Nordborg
References #595: Confirm alignment Saved files are attached to the …

May 9, 2014:

3:01 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2416]) Refs #592. Lab environment extension updated in code …
3:01 PM Changeset [2416] by olle
Refs #592. Lab environment extension updated in code formatting: 1. …
2:17 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2415]) Refs #592. Lab environment extension updated with lab …
2:17 PM Changeset [2415] by olle
Refs #592. Lab environment extension updated with lab environment …
2:03 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
Design of implementation for lab environment alarm control: 1. XML …
1:24 PM Ticket #593 (Start masking and alignment) updated by Nicklas Nordborg
(In [2414]) References #593: Start filter and alignment Removed …
1:24 PM Changeset [2414] by Nicklas Nordborg
References #593: Start filter and alignment Removed 'filter_' prefix …
1:23 PM Ticket #595 (Confirm alignment) updated by Nicklas Nordborg
Status changed
1:23 PM Changeset [2413] by Nicklas Nordborg
Remove 'filter_' prefix in the PE_filter script.
12:11 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
Design discussion for lab environment alarm control: Configuration of …
9:00 AM Changeset [2412] by Nicklas Nordborg
Merged Reggie 2.15.1 to trunk.
8:19 AM Milestone Reggie v2.15.1 completed
Bug fixes for Reggie 2.15 and changes for NextSeq support. See …
8:17 AM net.sf.basedb.reggie edited by Nicklas Nordborg
(diff)
8:17 AM net.sf.basedb.reggie/notes215 edited by Nicklas Nordborg
(diff)
8:16 AM net.sf.basedb.reggie edited by Nicklas Nordborg
(diff)
8:14 AM net.sf.basedb.reggie/notes2151 created by Nicklas Nordborg
8:08 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.15.1 (diff)
8:06 AM reggie-2.15.1.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.15.1
8:06 AM Ticket #594 (Changes for NextSeq support) closed by Nicklas Nordborg
fixed
8:05 AM Changeset [2411] by Nicklas Nordborg
Tagging Reggie 2.15.1
8:04 AM Changeset [2410] by Nicklas Nordborg
Preparing to release Reggie 2.15.1
8:02 AM Ticket #594 (Changes for NextSeq support) updated by Nicklas Nordborg
(In [2409]) References #594: Changes for NextSeq support Hide 'B' …
8:02 AM Changeset [2409] by Nicklas Nordborg
References #594: Changes for NextSeq support Hide 'B' position when …

May 8, 2014:

3:49 PM Ticket #594 (Changes for NextSeq support) updated by Nicklas Nordborg
(In [2408]) References #594: Changes for NextSeq support * Added …
3:49 PM Changeset [2408] by Nicklas Nordborg
References #594: Changes for NextSeq support * Added 'Lanes/flow …
2:30 PM Ticket #594 (Changes for NextSeq support) updated by Nicklas Nordborg
It has also been confirmed that data output is for 4 lanes, even …
2:25 PM Ticket #594 (Changes for NextSeq support) updated by Nicklas Nordborg
Status changed
The RunParameters.xml file from the NextSeq is not compatible with …
10:56 AM Ticket #595 (Confirm alignment) updated by Nicklas Nordborg
(In [2407]) References #595: Confirm alignment Extended the file …
10:56 AM Changeset [2407] by Nicklas Nordborg
References #595: Confirm alignment Extended the file listing feature …

May 7, 2014:

12:39 PM Ticket #595 (Confirm alignment) updated by Nicklas Nordborg
(In [2406]) References #595: Confirm alignment Adding a function for …
12:39 PM Changeset [2406] by Nicklas Nordborg
References #595: Confirm alignment Adding a function for listing and …
8:42 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2405]) Refs #592. Lab environment extension updated in class/file …
8:42 AM Changeset [2405] by olle
Refs #592. Lab environment extension updated in class/file …

May 6, 2014:

1:59 PM Ticket #595 (Confirm alignment) updated by Nicklas Nordborg
(In [2404]) References #595: Confirm alignment First version of the …
1:59 PM Changeset [2404] by Nicklas Nordborg
References #595: Confirm alignment First version of the wizard. It …
12:05 PM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2403]) Refs #592. Lab environment extension updated in class/file …
12:05 PM Changeset [2403] by olle
Refs #592. Lab environment extension updated in class/file …
11:55 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2402]) Refs #592. Lab environment extension updated in field name …
11:55 AM Changeset [2402] by olle
Refs #592. Lab environment extension updated in field name and help …
11:37 AM Ticket #595 (Confirm alignment) created by Nicklas Nordborg
Confirmation is needed after the filter/alignment step. The normal …
11:09 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
(In [2401]) Refs #592. Lab environment extension updated for …
11:09 AM Changeset [2401] by olle
Refs #592. Lab environment extension updated for displaying graphs of …
11:05 AM Ticket #592 (Lab environment extension improved report routines) updated by olle
Design of implementation for displaying graphs of lab environment data …
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