Timeline



Jan 9, 2014:

1:20 PM Ticket #554 (Do not show *.dil items in case summary) closed by Nicklas Nordborg
fixed: (In [2185]) Fixes #554: Do not show *.dil items in case summary A …
1:20 PM Changeset [2185] by Nicklas Nordborg
Fixes #554: Do not show *.dil items in case summary A check is made …
1:15 PM Ticket #554 (Do not show *.dil items in case summary) created by Nicklas Nordborg
Since #503 *.dil items are destroyed once the pooling process is …
1:12 PM Ticket #553 (Set different volume and mixing strategy for pools on a plate) closed by Nicklas Nordborg
fixed: (In [2184]) Fixes #553: Set different volume and mixing strategy for …
1:12 PM Changeset [2184] by Nicklas Nordborg
Fixes #553: Set different volume and mixing strategy for pools on a …

Jan 8, 2014:

10:51 AM Ticket #553 (Set different volume and mixing strategy for pools on a plate) updated by Nicklas Nordborg
Status changed
10:51 AM Ticket #553 (Set different volume and mixing strategy for pools on a plate) created by Nicklas Nordborg
The current implementation allow a target volume and mixing strategy …

Dec 20, 2013:

2:30 PM Ticket #550 (Overview report should show number of patients having a sample type item) closed by olle
fixed: Ticket closed as the requested functionality has been added.
2:19 PM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
(In [2183]) Refs #550. Overview report updated to allow time period …
2:19 PM Changeset [2183] by olle
Refs #550. Overview report updated to allow time period filter: JSP …
2:16 PM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
Design implementation: Overview report update to allow time period …
2:01 PM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
Design note: Some consequences of the design choices for the time …
1:36 PM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
Design update: * The overview report should allow a time period …
12:29 PM Ticket #550 (Overview report should show number of patients having a sample type item) reopened by olle
Ticket reopened as more functionality was desired for the report in …

Dec 13, 2013:

9:31 AM Ticket #552 (PluginUtilities-0.2.jar is in incorrect location) closed by Nicklas Nordborg
fixed: (In [2182]) Fixes #552: PluginUtilities-0.2.jar is in incorrect …
9:31 AM Changeset [2182] by Nicklas Nordborg
Fixes #552: PluginUtilities-0.2.jar is in incorrect location Download …
9:00 AM Ticket #552 (PluginUtilities-0.2.jar is in incorrect location) created by Nicklas Nordborg
When creating the normalization-plugins.jar file the …
8:14 AM Ticket #551 (Add 'install' target to normalizers build script) updated by Nicklas Nordborg
(In [2181]) References #551: Add 'install' target to normalizers build …
8:14 AM Changeset [2181] by Nicklas Nordborg
References #551: Add 'install' target to normalizers build script Add …

Dec 12, 2013:

1:58 PM Ticket #551 (Add 'install' target to normalizers build script) closed by Nicklas Nordborg
fixed: (In [2180]) Fixes #551: Add 'install' target to normalizers build script
1:58 PM Changeset [2180] by Nicklas Nordborg
Fixes #551: Add 'install' target to normalizers build script
1:39 PM Ticket #551 (Add 'install' target to normalizers build script) created by Nicklas Nordborg
See #363 and #362 for similar changes in other projects.
1:36 PM Changeset [2179] by Nicklas Nordborg
Update build path for Eclipse to use the BASE 3.2.4 jar files. Related …
11:56 AM PluginDownload edited by Jari Häkkinen
New beta version of net.sf.basedb.normalizers (1.1-beta2) (diff)
11:53 AM net.sf.basedb.normalizers edited by Jari Häkkinen
New beta version of net.sf.basedb.normalizers (1.1-beta2) (diff)
11:45 AM Ticket #550 (Overview report should show number of patients having a sample type item) closed by olle
fixed: Ticket closed as the requested functionality has been added.
11:44 AM normalization-plugins-1.1-beta2.tar.gz.MD5 attached to net.sf.basedb.normalizers by Jari Häkkinen
11:44 AM normalization-plugins-1.1-beta2.tar.gz attached to net.sf.basedb.normalizers by Jari Häkkinen
11:42 AM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
(In [2178]) Refs #550. Overview report updated to show number of …
11:42 AM Changeset [2178] by olle
Refs #550. Overview report updated to show number of patients having a …
11:41 AM Changeset [2177] by Jari Häkkinen
Tagging release 1.1-beta2
11:39 AM Changeset [2176] by Jari Häkkinen
Changes from release procedure and other minor things.
11:37 AM Changeset [2175] by Jari Häkkinen
Added blank line in parameter help string
11:06 AM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
Design implementation: The overview report is part of the sample …
10:47 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) closed by olle
fixed: Ticket closed as the requested functionality has been added.
10:47 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) closed by olle
fixed: Ticket closed as the requested functionality has been added.
10:45 AM Tickets #228,​541 batch updated by olle
(In [2174]) Refs #541. Refs #228. Outermost Ant build XML file updated …
10:45 AM Changeset [2174] by olle
Refs #541. Refs #228. Outermost Ant build XML file updated by …
10:30 AM Tickets #228,​541 batch updated by Jari Häkkinen
(In [2173]) Refs #228 and #541. Improving doc and help string
10:30 AM Changeset [2173] by Jari Häkkinen
Refs #228 and #541. Improving doc and help string
10:00 AM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
Design discussion: The overview report currently contains two tables, …
8:47 AM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
Traceability note: * The report generator was introduced in Ticket …
8:42 AM Ticket #550 (Overview report should show number of patients having a sample type item) updated by olle
Status changed
Ticket accepted.
8:42 AM Ticket #550 (Overview report should show number of patients having a sample type item) created by olle
Overview report should show number of patients having a sample type …

Dec 11, 2013:

1:52 PM Ticket #544 (Re-design lab protocol and registration wizards for histology) closed by Nicklas Nordborg
fixed: (In [2172]) Fixes #544: Re-design lab protocol and registration …
1:52 PM Changeset [2172] by Nicklas Nordborg
Fixes #544: Re-design lab protocol and registration wizards for …
8:40 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.14-beta-3 (diff)
8:22 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.14-beta-3 (diff)
8:18 AM reggie-2.14-beta-3.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.14-beta-3
8:17 AM Changeset [2171] by Nicklas Nordborg
Tagging Reggie 2.14-beta-3
8:17 AM Changeset [2170] by Nicklas Nordborg
Preparing to release Reggie 2.14-beta-3

Dec 10, 2013:

10:00 PM net.sf.basedb.reggie.notes214 edited by Nicklas Nordborg
Clarifying role membership (diff)
9:47 PM Ticket #528 (Restrict access to some registation wizards) updated by Nicklas Nordborg
(In [2169]) References #528: Restrict access to some registation …
9:47 PM Changeset [2169] by Nicklas Nordborg
References #528: Restrict access to some registation wizards There …
3:28 PM Ticket #549 (Installation wizard should share biomaterial lists with WRITE permission) closed by Nicklas Nordborg
fixed: (In [2168]) Fixes #549: Installation wizard should share biomaterial …
3:28 PM Changeset [2168] by Nicklas Nordborg
Fixes #549: Installation wizard should share biomaterial lists with …
3:04 PM Ticket #549 (Installation wizard should share biomaterial lists with WRITE permission) created by Nicklas Nordborg
Releated to #506, but it was not specified that unlike other items …
2:33 PM secondary-analysis-overview-v1.pdf attached to Ticket #533 by Nicklas Nordborg
Overview PDF v1
12:45 PM Ticket #533 (Add secondary analysis section to Reggie) updated by Nicklas Nordborg
Description changed
12:44 PM Ticket #548 (Register Demux and Merge as ended) created by Nicklas Nordborg
Part of #533. This wizard is used to register that demuxing and …
10:59 AM Ticket #533 (Add secondary analysis section to Reggie) updated by Nicklas Nordborg
Description changed
10:59 AM Ticket #547 (Start Demux and Merge) created by Nicklas Nordborg
Part of #533. This wizard is started after confirming a successful …
9:50 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by olle
(In [2167]) Refs #541. Rank invariant normalization updated to store …
9:50 AM Changeset [2167] by olle
Refs #541. Rank invariant normalization updated to store data in same …
9:45 AM Ticket #533 (Add secondary analysis section to Reggie) updated by Nicklas Nordborg
Description changed
9:45 AM Ticket #546 (Confirm sequencing as completed) created by Nicklas Nordborg
Part of #533. This is the first wizard in the "Secondary analysis …
9:32 AM Ticket #533 (Add secondary analysis section to Reggie) updated by Nicklas Nordborg
Description changed
9:32 AM Ticket #545 (Register sequencing as ended) updated by Nicklas Nordborg
Description changed
9:31 AM Ticket #545 (Register sequencing as ended) created by Nicklas Nordborg
Part of #533. This wizard should be the last wizard in the "Library …
9:20 AM Ticket #533 (Add secondary analysis section to Reggie) updated by Nicklas Nordborg
Description, Summary changed
8:54 AM Ticket #541 (net.sf.basedb.normalizers: Normalizers should store normalized data in ...) updated by olle
Design note: * When data stored in logarithmic format are …
8:53 AM Ticket #228 (net.sf.basedb.normalizers: Normalizers should use ask BASE whether ...) updated by olle
Design note: * When data stored in logarithmic format are …
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