Timeline



May 23, 2013:

2:11 PM Ticket #495 (The RNA QC registration wizard should use default path and filter on ...) closed by Nicklas Nordborg
fixed: (In [1994]) Fixes #495: The RNA QC registration wizard should use …
2:11 PM Changeset [1994] by Nicklas Nordborg
Fixes #495: The RNA QC registration wizard should use default path and …
2:06 PM Changeset [1993] by Nicklas Nordborg
Uncomment line that was disabled for testing in previous checkin [1992].
2:02 PM Ticket #495 (The RNA QC registration wizard should use default path and filter on ...) created by Nicklas Nordborg
This functionality was implemented in several library preparation …
1:59 PM Tickets #436,​473 batch updated by Nicklas Nordborg
(In [1992]) References #436 and #473. Added subtypes for 5 different …
1:59 PM Changeset [1992] by Nicklas Nordborg
References #436 and #473. Added subtypes for 5 different files …
12:53 PM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1991]) References #473: Register library processing results …
12:53 PM Changeset [1991] by Nicklas Nordborg
References #473: Register library processing results Automatically …
11:28 AM Ticket #436 (Import mRNA quality control results) updated by Nicklas Nordborg
(In [1990]) References #436: Import mRNA quality control results …
11:28 AM Changeset [1990] by Nicklas Nordborg
References #436: Import mRNA quality control results Automatically …
10:49 AM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1989]) References #473: Register library processing results Set …
10:49 AM Changeset [1989] by Nicklas Nordborg
References #473: Register library processing results Set file …
10:42 AM Ticket #436 (Import mRNA quality control results) updated by Nicklas Nordborg
(In [1988]) References #436: Import mRNA quality control results Set …
10:42 AM Changeset [1988] by Nicklas Nordborg
References #436: Import mRNA quality control results Set file …
10:36 AM Ticket #485 (Select libraries for pooling) updated by Nicklas Nordborg
(In [1987]) References #485: Select libraries for pooling Added new …
10:36 AM Changeset [1987] by Nicklas Nordborg
References #485: Select libraries for pooling Added new …

May 21, 2013:

2:34 PM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1986]) References #473: Register library processing results Show …
2:34 PM Changeset [1986] by Nicklas Nordborg
References #473: Register library processing results Show warning if …
12:18 PM Ticket #480 (Register pooled libraries) updated by Nicklas Nordborg
(In [1985]) References #480: Register pooled libraries "Operator" …
12:18 PM Changeset [1985] by Nicklas Nordborg
References #480: Register pooled libraries "Operator" annotation must …
11:10 AM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1984]) References #473: Register library processing results Save …
11:10 AM Changeset [1984] by Nicklas Nordborg
References #473: Register library processing results Save comments in …
10:45 AM Ticket #494 (Show number of items waiting for processing on the index page) closed by Nicklas Nordborg
fixed: (In [1983]) Fixes #494: Show number of items waiting for processing on …
10:45 AM Changeset [1983] by Nicklas Nordborg
Fixes #494: Show number of items waiting for processing on the index …

May 20, 2013:

1:30 PM Ticket #494 (Show number of items waiting for processing on the index page) created by Nicklas Nordborg
Now that the index page is full of wizards it would be nice to display …
8:48 AM Ticket #493 (NoSpecimen items are not displayed in case summary for cases that also ...) closed by Nicklas Nordborg
fixed
8:48 AM Ticket #493 (NoSpecimen items are not displayed in case summary for cases that also ...) updated by Nicklas Nordborg
(In [1982]) Fixes #493: NoSpecimen items are not displayed in case …

May 17, 2013:

2:15 PM Changeset [1982] by Nicklas Nordborg
Ticked #493: NoSpecimen items are not displayed in case summary for …
2:11 PM Ticket #493 (NoSpecimen items are not displayed in case summary for cases that also ...) created by Nicklas Nordborg
2:10 PM Ticket #491 (Laterality is not stored for NoSpecimen items in some cases) closed by Nicklas Nordborg
fixed: (In [1981]) Fixes #491: Laterality is not stored for NoSpecimen items …
2:10 PM Changeset [1981] by Nicklas Nordborg
Fixes #491: Laterality is not stored for NoSpecimen items in some …
9:48 AM Ticket #492 (Do not allow specimen tube registration to select a different ...) closed by Nicklas Nordborg
fixed: (In [1980]) Fixes #492: Do not allow specimen tube registration to …
9:48 AM Changeset [1980] by Nicklas Nordborg
Fixes #492: Do not allow specimen tube registration to select a …
8:46 AM Ticket #491 (Laterality is not stored for NoSpecimen items in some cases) updated by Nicklas Nordborg
We need to manually fix items that already has been registered with …

May 16, 2013:

3:52 PM Ticket #492 (Do not allow specimen tube registration to select a different ...) created by Nicklas Nordborg
There is a use case when a SpecimenCoreBiopsy for a case already …
3:44 PM Ticket #491 (Laterality is not stored for NoSpecimen items in some cases) updated by Nicklas Nordborg
Description changed
3:42 PM Ticket #491 (Laterality is not stored for NoSpecimen items in some cases) created by Nicklas Nordborg
The scenario we have found so far is: 1. A SpecimenCoreBiopsy is …
11:22 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.12-beta-4 (diff)
11:22 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.12-beta-4 (diff)
11:20 AM reggie-2.12-beta-4.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.12-beta-4
11:20 AM Changeset [1979] by Nicklas Nordborg
Tagging Reggie 2.12-beta-4
11:19 AM Changeset [1978] by Nicklas Nordborg
Preparing to release Reggie 2.12-beta-4
11:02 AM Tickets #422,​423,​478 batch updated by Nicklas Nordborg
(In [1977]) References #422, #423, #478 and more... Added Operator
11:02 AM Changeset [1977] by Nicklas Nordborg
References #422, #423, #478 and more... Added Operator annotation …

May 15, 2013:

3:53 PM Ticket #490 (Histology scoring lab protocols) created by Nicklas Nordborg
Lab protocols may not be needed if it is possible to register the …
3:45 PM Ticket #489 (Histology scoring wizard) created by Nicklas Nordborg
This is a new wizard in the Histology section. It should be used to …
2:28 PM Ticket #480 (Register pooled libraries) updated by Nicklas Nordborg
(In [1976]) References #480: Register pooled libraries Set creation …
2:28 PM Changeset [1976] by Nicklas Nordborg
References #480: Register pooled libraries Set creation date on .dil …
1:20 PM Tickets #479,​485 batch updated by Nicklas Nordborg
(In [1975]) References #485 and #479. Only use 1 decimal in lab …
1:20 PM Changeset [1975] by Nicklas Nordborg
References #485 and #479. Only use 1 decimal in lab protocols for …

May 14, 2013:

3:52 PM Ticket #480 (Register pooled libraries) updated by Nicklas Nordborg
(In [1974]) References #480: Register pooled libraries Do not show …
3:52 PM Changeset [1974] by Nicklas Nordborg
References #480: Register pooled libraries Do not show form until …
3:51 PM Ticket #479 (Generate lab protocol for pooling) updated by Nicklas Nordborg
(In [1973]) References #479: Generate lab protocol for pooling and …
3:51 PM Changeset [1973] by Nicklas Nordborg
References #479: Generate lab protocol for pooling and flow cell …
3:50 PM Ticket #485 (Select libraries for pooling) updated by Nicklas Nordborg
(In [1972]) References #485: Select libraries for pooling Hide first …
3:50 PM Changeset [1972] by Nicklas Nordborg
References #485: Select libraries for pooling Hide first section when …
3:49 PM Ticket #456 (Barcode layout wizard) updated by Nicklas Nordborg
(In [1971]) References #456: Barcode layout wizard Hide first section …
3:49 PM Changeset [1971] by Nicklas Nordborg
References #456: Barcode layout wizard Hide first section when moving …

May 8, 2013:

2:55 PM Ticket #480 (Register pooled libraries) updated by Nicklas Nordborg
(In [1970]) References #480: Register pooled libraries Preliminary …
2:55 PM Changeset [1970] by Nicklas Nordborg
References #480: Register pooled libraries Preliminary registration …
1:16 PM Ticket #485 (Select libraries for pooling) updated by Nicklas Nordborg
Status changed
1:15 PM Ticket #480 (Register pooled libraries) updated by Nicklas Nordborg
Status changed
11:29 AM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1969]) References #473: Register library processing results …
11:29 AM Changeset [1969]
This is an empty revision for padding.
11:10 AM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1968]) References #473: Register library processing results …
11:10 AM Changeset [1968] by Nicklas Nordborg
References #473: Register library processing results Swithced order …
9:43 AM Ticket #488 (Add support for matching RNAQC items using location instead of names ...) updated by Nicklas Nordborg
(In [1967]) Fixes #488: Add support for matching RNAQC items using …
9:43 AM Changeset [1967]
This is an empty revision for padding.
9:36 AM Ticket #488 (Add support for matching RNAQC items using location instead of names ...) closed by Nicklas Nordborg
fixed: (In [1966]) Fixes #488: Add support for matching RNAQC items using …
9:36 AM Changeset [1966] by Nicklas Nordborg
Fixes #488: Add support for matching RNAQC items using location …

May 7, 2013:

3:39 PM Ticket #488 (Add support for matching RNAQC items using location instead of names ...) updated by Nicklas Nordborg
Status changed
3:39 PM Ticket #488 (Add support for matching RNAQC items using location instead of names ...) created by Nicklas Nordborg
For some reason it seems like the Caliper software on occasion is …
3:15 PM Ticket #479 (Generate lab protocol for pooling) updated by Nicklas Nordborg
(In [1965]) References #479: Generate lab protocol for pooling and …
3:15 PM Changeset [1965] by Nicklas Nordborg
References #479: Generate lab protocol for pooling and flow cell …
1:57 PM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1964]) References #473: Register library processing results …
1:57 PM Changeset [1964] by Nicklas Nordborg
References #473: Register library processing results Forgot to …
1:31 PM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1963]) References #473: Register library processing results The …
1:31 PM Changeset [1963] by Nicklas Nordborg
References #473: Register library processing results The Caliper …

May 6, 2013:

3:24 PM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1962]) References #473: Register library processing results The …
3:24 PM Changeset [1962] by Nicklas Nordborg
References #473: Register library processing results The importer for …
3:21 PM Ticket #473 (Register library processing results) updated by Nicklas Nordborg
(In [1961]) References #473: Register library processing results The …
3:21 PM Changeset [1961] by Nicklas Nordborg
References #473: Register library processing results The library …
1:06 PM Ticket #424 (Select RNA items for library preparation) updated by Nicklas Nordborg
(In [1960]) References #424: Select RNA items for library preparation …
1:06 PM Changeset [1960] by Nicklas Nordborg
References #424: Select RNA items for library preparation Minor …

May 3, 2013:

2:58 PM Tickets #479,​485 batch updated by Nicklas Nordborg
(In [1959]) References #479 and #485. Re-worked the process of …
2:58 PM Changeset [1959] by Nicklas Nordborg
References #479 and #485. Re-worked the process of selecing libraries …
2:03 PM Ticket #487 (Export information intended for INCA) updated by olle
(In [1958]) Refs #487. Second version of the INCA export. Class/file …
2:03 PM Changeset [1958] by olle
Refs #487. Second version of the INCA export. Class/file …
1:55 PM Ticket #487 (Export information intended for INCA) updated by olle
Design update: 1. Since the export format for the monthly operation …

May 2, 2013:

3:00 PM Ticket #487 (Export information intended for INCA) updated by olle
Functionality description update: The INCA export file is intended to …

Apr 30, 2013:

10:04 AM Ticket #487 (Export information intended for INCA) updated by olle
(In [1957]) Refs #487. First version of the INCA export.
10:04 AM Changeset [1957] by olle
Refs #487. First version of the INCA export.
9:51 AM Ticket #487 (Export information intended for INCA) updated by olle
Design discussion. Since the export has many features in common with …

Apr 29, 2013:

11:18 AM Ticket #487 (Export information intended for INCA) updated by olle
Description changed
Ticket description updated.

Apr 25, 2013:

11:19 AM Ticket #487 (Export information intended for INCA) updated by olle
Description changed
Ticket description updated regarding the date used in the export format.
10:17 AM Ticket #487 (Export information intended for INCA) updated by olle
Background info: * INCA is an abbreviation of the Swedish expression …
10:14 AM Ticket #487 (Export information intended for INCA) updated by olle
Traceability note: * The monthly operation list export was …
10:11 AM Ticket #487 (Export information intended for INCA) updated by olle
Description changed
Ticket description updated with specification of the export format.
9:43 AM Ticket #487 (Export information intended for INCA) updated by olle
Status changed
Ticket accepted.
9:43 AM Ticket #487 (Export information intended for INCA) created by olle
It should be possible to export information intended for INCA, a …
9:19 AM Ticket #486 (Monthly operation list export should not have optional columns) closed by olle
fixed: (In [1956]) Fixes #486. Monthly operation list export updated by not …
9:19 AM Changeset [1956] by olle
Fixes #486. Monthly operation list export updated by not including …
9:17 AM Ticket #486 (Monthly operation list export should not have optional columns) updated by olle
Design update: The monthly operation list export is managed by JSP …
8:35 AM Ticket #486 (Monthly operation list export should not have optional columns) updated by olle
Traceability note: * The monthly operation list export was …
8:24 AM Ticket #486 (Monthly operation list export should not have optional columns) updated by olle
Status changed
Ticket accepted.
8:23 AM Ticket #486 (Monthly operation list export should not have optional columns) created by olle
The current choice of optional columns "Specimen/NoSpecimen" and …

Apr 24, 2013:

1:47 PM Changeset [1955] by Nicklas Nordborg
Script for anonymizing data update to create fake PersonalNumbers
11:38 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.12-beta-3 (diff)
11:37 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.12-beta-3 (diff)
11:36 AM reggie-2.12-beta-3.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.12-beta-3
11:36 AM Changeset [1954] by Nicklas Nordborg
Tagging Reggie 2.12-beta-3
11:35 AM Changeset [1953] by Nicklas Nordborg
Preparing for release of Reggie 2.12-beta-3
11:33 AM Ticket #485 (Select libraries for pooling) updated by Nicklas Nordborg
(In [1952]) References #485: Select libraries for pooling Calculate …
11:33 AM Changeset [1952] by Nicklas Nordborg
References #485: Select libraries for pooling Calculate volumes in …
11:13 AM Ticket #424 (Select RNA items for library preparation) updated by Nicklas Nordborg
(In [1951]) References #424: Select RNA items for library preparation …
11:13 AM Changeset [1951] by Nicklas Nordborg
References #424: Select RNA items for library preparation Add link to …

Apr 23, 2013:

8:27 AM Ticket #473 (Register library processing results) closed by Nicklas Nordborg
fixed
8:26 AM Ticket #472 (Export data to files needed for library preparation) closed by Nicklas Nordborg
fixed
8:26 AM Ticket #457 (Generate lab protocol for cDNA -> Library preparation) closed by Nicklas Nordborg
fixed
8:26 AM Ticket #456 (Barcode layout wizard) closed by Nicklas Nordborg
fixed
8:00 AM Ticket #479 (Generate lab protocol for pooling) updated by Nicklas Nordborg
(In [1950]) References #479: Generate lab protocol for pooling and …
8:00 AM Ticket #479 (Generate lab protocol for pooling) updated by Nicklas Nordborg
(In [1948]) References #479: Generate lab protocol for pooling and …
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