Timeline



Mar 7, 2013:

2:41 PM Changeset [1901] by Nicklas Nordborg
References #472: Export data to files needed for library preparation …
2:29 PM Changeset [1900] by Nicklas Nordborg
References #472: Export data to files needed for library preparation …
10:56 AM Changeset [1899] by Nicklas Nordborg
References #422 and #423. New name pattern for mRNA, cDNA and Library …
9:41 AM Changeset [1898] by Nicklas Nordborg
References #425: Generate a lab protocol for RNA -> cDNA processing …

Mar 6, 2013:

11:55 AM Ticket #474 (Depend on BASE 3.2.2) created by Nicklas Nordborg
We found a bug in BASE that may potentially lead to …
9:39 AM Ticket #469 (Better handling of login timeout in Reggie wizards) closed by Nicklas Nordborg
fixed: (In [1897]) Fixes #469: Better handling of login timeout in Reggie …
9:39 AM Changeset [1897] by Nicklas Nordborg
Fixes #469: Better handling of login timeout in Reggie wizards A …

Mar 5, 2013:

1:16 PM Changeset [1896] by Nicklas Nordborg
References #472: Export data to files needed for library preparation …
9:02 AM Changeset [1895] by Nicklas Nordborg
References #473: Register library processing results Started with the …
8:35 AM Ticket #473 (Register library processing results) created by Nicklas Nordborg
This wizard is the last step in #423. In the lab, the library …
8:25 AM Ticket #472 (Export data to files needed for library preparation) created by Nicklas Nordborg
Caliper and Qubit are used for quality control and measuring …

Mar 4, 2013:

1:08 PM Ticket #441 (Register cDNA plate as completed) closed by Nicklas Nordborg
fixed
1:07 PM Ticket #436 (Import mRNA quality control results) closed by Nicklas Nordborg
fixed
1:05 PM Ticket #425 (Generate a lab protocol for RNA -> cDNA processing) closed by Nicklas Nordborg
fixed
1:04 PM Ticket #424 (Select RNA items for library preparation) closed by Nicklas Nordborg
fixed: Closing this ticket for now. There may be some smaller issues to be …
1:02 PM Ticket #440 (Export data to files needed for mRNA/cDNA processing) closed by Nicklas Nordborg
wontfix: Seems like the BioAnalyzer software has no support for importing …
12:59 PM Changeset [1894] by Nicklas Nordborg
References #457: Generate lab protocol for cDNA -> Library preparation …
10:55 AM Changeset [1893] by Nicklas Nordborg
References #456: Barcode layout wizard Use missing BARCODE_VARIANT …

Mar 1, 2013:

1:26 PM Ticket #471 (Add library preparation information to the 'Case summary' feature) created by Nicklas Nordborg
Once #422 and #423 has been implemented there will be more information …
1:23 PM Ticket #470 (Add 'Print version' functionality to the 'Case summary' feature) created by Nicklas Nordborg
See #462 and #450. The summary currently fits on one page, but if we …
1:19 PM Changeset [1892] by Nicklas Nordborg
References #422: Implement wizards for RNA->cDNA processing Remove …
1:02 PM Changeset [1891] by Nicklas Nordborg
References #425: Generate a lab protocol for RNA -> cDNA processing …
12:41 PM Ticket #469 (Better handling of login timeout in Reggie wizards) created by Nicklas Nordborg
Some of the Reggie wizards may take some time to complete, for …
11:12 AM Changeset [1890] by Nicklas Nordborg
References #436 and #441. Added support for registering a cDNA plate …

Feb 27, 2013:

2:29 PM Changeset [1889] by Nicklas Nordborg
References #436 and #424. Added support for registering a mRNA plate …
1:47 PM Ticket #468 (NullPointerException when registering Caliper results if Plate name ...) closed by Nicklas Nordborg
fixed: (In [1888]) Fixes #468: NullPointerException? when registering Caliper …
1:47 PM Changeset [1888] by Nicklas Nordborg
Fixes #468: NullPointerException? when registering Caliper results if …
1:43 PM Ticket #468 (NullPointerException when registering Caliper results if Plate name ...) created by Nicklas Nordborg
If the WellTable.csv contains a row with an empty Plate name value, …
12:11 PM Changeset [1887] by olle
README file updated by change of extension full name from BRCA-Reggie …
12:07 PM net.sf.basedb.brcareg edited by olle
Extension full name changed from BRCA-Reggie to BRCA-Reg, in order to … (diff)
10:39 AM Changeset [1886] by olle
Fixed typo.
9:32 AM Changeset [1885] by olle
Preliminary version of README for BRCA-Reggie wiki page.
9:26 AM net.sf.basedb.brcareg edited by olle
Changed README link to trunk, until a tagged version is available (diff)
9:25 AM net.sf.basedb.brcareg edited by olle
(diff)
9:07 AM net.sf.basedb.brcareg created by olle
Page created
8:03 AM Changeset [1884] by olle
SVN project brcareg remote folder tags created.
8:02 AM Changeset [1883] by olle
SVN project brcareg remote folder trunk created.
8:00 AM Changeset [1882] by olle
SVN project brcareg created.

Feb 26, 2013:

11:00 AM Changeset [1881] by Nicklas Nordborg
References #424: Select RNA items for library preparation Update …

Feb 22, 2013:

12:51 PM Changeset [1880] by Nicklas Nordborg
Merge changes in Reggie 2.11.1 back to trunk.
12:47 PM Milestone Reggie v2.11.1 completed
Bug fixes for Reggie 2.11. See [wiki:net.sf.basedb.reggie Reggie …
12:47 PM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.11.1 (diff)
12:46 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.11.1 (diff)
12:45 PM reggie-2.11.1.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.11.1
12:45 PM Changeset [1879] by Nicklas Nordborg
Tagging Reggie 2.11.1
12:44 PM Changeset [1878] by Nicklas Nordborg
Preparing to release Reggie 2.11.1
12:43 PM Ticket #466 (Incorrect titles in some sample processing statistics plots) closed by Nicklas Nordborg
fixed: (In [1877]) Fixes #466: Incorrect titles in some sample processing …
12:43 PM Changeset [1877] by Nicklas Nordborg
Fixes #466: Incorrect titles in some sample processing statistics plots
12:35 PM Ticket #467 (Display guidelines when moving mouse over sample processing plots) closed by Nicklas Nordborg
fixed: (In [1876]) Fixes #467: Display guidelines when moving mouse over …
12:35 PM Changeset [1876] by Nicklas Nordborg
Fixes #467: Display guidelines when moving mouse over sample …
10:31 AM Ticket #467 (Display guidelines when moving mouse over sample processing plots) created by Nicklas Nordborg
Some plots have narrow boxes and it can be hard to see exactly which …
8:52 AM Ticket #465 (Improve printing of canvas elements) closed by Nicklas Nordborg
fixed: (In [1875]) Fixes #465: Improve printing of canvas elements …
8:52 AM Changeset [1875] by Nicklas Nordborg
Fixes #465: Improve printing of canvas elements Implemented by …
8:03 AM Changeset [1874] by Nicklas Nordborg
Creating bug-fix branch for Reggie 2.11

Feb 21, 2013:

10:54 AM Ticket #466 (Incorrect titles in some sample processing statistics plots) created by Nicklas Nordborg
Total quantity DNA/RNA used for SCANB extractions... should remove …
10:49 AM Ticket #465 (Improve printing of canvas elements) created by Nicklas Nordborg
Although the printing feature introduced in #462 works well, there is …

Feb 20, 2013:

3:01 PM Changeset [1873] by Nicklas Nordborg
Preparing for future release Print package 1.1
3:01 PM Milestone Print package v1.0 completed
See Print package extension page for more …
3:00 PM PluginDownload edited by Nicklas Nordborg
Released Print package 1.0 (diff)
2:57 PM net.sf.basedb.print edited by Nicklas Nordborg
Released Print package 1.0 (diff)
2:55 PM base-print-1.0.tar.gz attached to net.sf.basedb.print by Nicklas Nordborg
Print package 1.0
2:54 PM Ticket #464 (Implement a 'Print' button for table listings) closed by Nicklas Nordborg
fixed
2:54 PM Changeset [1872] by Nicklas Nordborg
Tagging Print package 1.0
2:53 PM Changeset [1871] by Nicklas Nordborg
Preparing to release Print package 1.0
2:52 PM Changeset [1870] by Nicklas Nordborg
References #464: Implement a 'Print' button for table listings Should …
2:51 PM net.sf.basedb.print created by Nicklas Nordborg
Added wiki page for the 'Print package'
2:48 PM Ticket #464 (Implement a 'Print' button for table listings) created by Nicklas Nordborg
There is a problem with the current BASE GUI implementation when …
8:38 AM Changeset [1869] by Nicklas Nordborg
Adding 'trunk' folder for new "Print" extension.
8:38 AM Changeset [1868] by Nicklas Nordborg
Adding folder for new "Print" extension.

Feb 19, 2013:

2:56 PM Ticket #463 (Illumina expression background correction (version 1.7) does not ask ...) created by johan
Illumina expression background correction (version 1.7) When …
1:36 PM Changeset [1867] by Nicklas Nordborg
References #422, #423 and other related tickets. Updated @since
1:28 PM Changeset [1866] by Nicklas Nordborg
Remove branch net.sf.basedb.reggie/branches/ticket-422 since it has …
1:27 PM Changeset [1865] by Nicklas Nordborg
Merge work done in net.sf.basedb.reggie/branches/ticket-422 back to …
1:16 PM Changeset [1864] by Nicklas Nordborg
Catching up on trunk revisions 1784 to 1863. Changes in this branch …
11:41 AM Changeset [1863] by Nicklas Nordborg
Preparing for future release Reggie 2.12
11:40 AM Milestone Reggie v2.11 completed
See Reggie extension page for more information.
11:38 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.11 (diff)
11:38 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.11 (diff)
11:36 AM reggie-2.11.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.11
11:35 AM Changeset [1862] by Nicklas Nordborg
Tagging Reggie 2.11
11:34 AM Changeset [1861] by Nicklas Nordborg
Preparing to release Reggie 2.11
11:29 AM Changeset [1860] by Nicklas Nordborg
Added one @SuppressWarnings annotation and removed another one.
11:22 AM Ticket #461 (Sample processing report generator) closed by olle
fixed: Ticket closed as the first version of the SCAN-B quarter/month report …
11:20 AM Changeset [1859] by Nicklas Nordborg
References #462: Implement a print function that can print complete …
9:42 AM Ticket #450 (Show information about a case/patient) closed by Nicklas Nordborg
fixed
9:41 AM Ticket #462 (Implement a print function that can print complete pages) closed by Nicklas Nordborg
fixed: Seems to work as expected.
9:41 AM Changeset [1858] by Nicklas Nordborg
References #461: Sample processing report generator Do not display …
8:59 AM Changeset [1857] by Nicklas Nordborg
References #461: Sample processing report generator Use 1 or 2 number …
8:38 AM Changeset [1856] by olle
Refs #461. JavaScript file boxplot.js in reggie/resources/

Feb 18, 2013:

5:14 PM Changeset [1855] by olle
Refs #461. SCAN-B quarter/month report updated to allow statistics of …
4:43 PM Changeset [1854] by olle
Refs #461. JavaScript file boxplot.js in reggie/resources/
2:41 PM Changeset [1853] by Nicklas Nordborg
References #461: Sample processing report generator * Changed AJAX …
2:15 PM Changeset [1852] by Nicklas Nordborg
References #461: Sample processing report generator * Disable debug …
2:04 PM Changeset [1851] by Nicklas Nordborg
References #461 and #462. * Added print functionality to the "Sample …
11:51 AM Changeset [1850] by olle
Refs #461. Java class/file ScanBQuarterMonthReportServlet.java in …
9:54 AM Changeset [1849] by Nicklas Nordborg
References #462: Implement a print function that can print complete …
8:13 AM Changeset [1848] by olle
Refs #461. Java class/file ScanBQuarterMonthReportServlet.java in …

Feb 15, 2013:

4:07 PM Changeset [1847] by olle
Refs #461. Java class/file ScanBQuarterMonthReportServlet.java in …
2:55 PM Changeset [1846] by olle
Refs #461. Java class/file ScanBQuarterMonthReportServlet.java in …
11:37 AM Ticket #462 (Implement a print function that can print complete pages) created by Nicklas Nordborg
There is a problem with the current BASE GUI implementation when …
9:04 AM Changeset [1845] by olle
Refs #461. Boxplot routines for drawing y-axis scale markers now …
8:48 AM Changeset [1844] by Nicklas Nordborg
References #450: Show information about a case/patient * Added …

Feb 14, 2013:

3:27 PM Changeset [1843] by olle
Refs #461. Sample processing report is updated to allow appended text …
1:40 PM Changeset [1842] by olle
Refs #461. Java class/file ScanBQuarterMonthReportServlet.java in …
9:43 AM Changeset [1841] by Nicklas Nordborg
References #450: Show information about a case/patient Remove menu …

Feb 13, 2013:

2:12 PM Changeset [1840] by olle
Refs #461. Java class/file ScanBQuarterMonthReportServlet.java in …
1:47 PM Changeset [1839] by Nicklas Nordborg
References #450: Show information about a case/patient Renamed "Case …
12:41 PM Changeset [1838] by Nicklas Nordborg
References #450: Show information about a case/patient Fixed an issue …
11:18 AM Changeset [1837] by olle
Refs #461. Java class/file ScanBQuarterMonthReportServlet.java in …
10:41 AM Changeset [1836] by Nicklas Nordborg
References #450: Show information about a case/patient Reworked the …
9:42 AM Changeset [1835] by olle
Refs #459. Utility class/file ReportTableUtilServlet.java in …

Feb 8, 2013:

2:56 PM Changeset [1834] by Nicklas Nordborg
References #450: Show information about a case/patient Hide …
2:10 PM Changeset [1833] by Nicklas Nordborg
References #450: Show information about a case/patient Added …
2:04 PM Changeset [1832] by Nicklas Nordborg
References #450: Show information about a case/patient Added …
12:58 PM Changeset [1831] by Nicklas Nordborg
References #450: Show information about a case/patient Added …
9:08 AM Changeset [1830] by Nicklas Nordborg
References #461: Sample processing report generator Fixed the cleanup …
8:51 AM Changeset [1829] by Nicklas Nordborg
References #461: Sample processing report generator Added an SQL …
Note: See TracTimeline for information about the timeline view.