Timeline



Dec 14, 2012:

2:28 PM Changeset [1788] by Nicklas Nordborg
References #453: Incorrect registration of case if consent form is …
1:44 PM Ticket #453 (Incorrect registration of case if consent form is registered before ...) created by Nicklas Nordborg
A. The usual order of registration is that blood is registered before …

Dec 13, 2012:

10:37 AM Milestone Reggie v2.10.1 completed
10:37 AM Changeset [1787] by Nicklas Nordborg
Preparing for future release Reggie 2.11
10:36 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.10.1 (diff)
10:35 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.10.1 (diff)
10:34 AM reggie-2.10.1.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.10.1
10:33 AM Changeset [1786] by Nicklas Nordborg
Tagging Reggie 2.10.1
10:33 AM Changeset [1785] by Nicklas Nordborg
Preparing to release Reggie 2.10.1
9:53 AM Ticket #452 (Consent count report should not count missing constents as consents ...) closed by olle
fixed: (In [1784]) Fixes #452. Consent count report updated to not count …
9:53 AM Changeset [1784] by olle
Fixes #452. Consent count report updated to not count missing consents …
8:29 AM Changeset [1783] by Nicklas Nordborg
Removing UTF-8 BOM in testdata file.
8:23 AM net.sf.basedb.ftp edited by Nicklas Nordborg
Fixed broken link to Apache site (diff)

Dec 12, 2012:

4:23 PM Ticket #452 (Consent count report should not count missing constents as consents ...) created by olle
Consent count report should not count missing consents as consents …
3:05 PM Changeset [1782] by Nicklas Nordborg
Catching up on trunk revisions 1755 to 1781.
2:59 PM Changeset [1781] by Nicklas Nordborg
Preparing for future release Reggie 2.11
2:58 PM Milestone Reggie v2.10 completed
See Reggie extension page for more information.
2:57 PM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.10 (diff)
2:56 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.10 (diff)
2:54 PM reggie-2.10.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.10
2:53 PM Changeset [1780] by Nicklas Nordborg
Tagging Reggie 2.10
2:53 PM Changeset [1779] by Nicklas Nordborg
Preparing to release Reggie 2.10
2:29 PM Ticket #446 (The Paraffin block registration wizard should have comment fields) closed by Nicklas Nordborg
fixed
2:28 PM Ticket #447 (The HE glass registration wizard should have a field for the number of ...) closed by Nicklas Nordborg
fixed: (In [1778]) Fixes #447: The HE glass registration wizard should have a …
2:28 PM Changeset [1778] by Nicklas Nordborg
Fixes #447: The HE glass registration wizard should have a field for …
12:28 PM Ticket #445 (The HE glass registration wizard should have comment fields) closed by Nicklas Nordborg
fixed: (In [1777]) Fixes #445: The HE glass registration wizard should have …
12:28 PM Changeset [1777] by Nicklas Nordborg
Fixes #445: The HE glass registration wizard should have comment fields

Dec 11, 2012:

3:50 PM Changeset [1776] by Nicklas Nordborg
References #446: The Paraffin block registration wizard should have …
2:52 PM Ticket #448 (Register comments for blood samples) closed by olle
fixed: (In [1775]) Fixes #448. The blood registration form now accepts comments.
2:52 PM Changeset [1775] by olle
Fixes #448. The blood registration form now accepts comments.
2:27 PM Ticket #451 (Change 'storage location' for paraffin blocks and HE glass) closed by Nicklas Nordborg
fixed
2:27 PM net.sf.basedb.reggie.notes210 created by Nicklas Nordborg
Adding updgrade instructions related to #451
2:16 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Preparing to add an update not for Reggie 2.10 (diff)
2:13 PM Changeset [1774] by Nicklas Nordborg
References #451: Change 'storage location' for paraffin blocks and HE …
10:27 AM Ticket #451 (Change 'storage location' for paraffin blocks and HE glass) created by Nicklas Nordborg
The 'storage location' for paraffin blocks and HE glass (bioplate …
10:12 AM Ticket #444 (The 'Plasma/serum' checkbox should be checked by default in the blood ...) closed by olle
fixed: (In [1773]) Fixes #444. The 'Plasma/serum' checkbox in JSP script …
10:12 AM Changeset [1773] by olle
Fixes #444. The 'Plasma/serum' checkbox in JSP script bloodform.jsp

Dec 10, 2012:

3:49 PM Ticket #450 (Show information about a case/patient) created by Nicklas Nordborg
The idea is to implement a function that takes a case number or …
3:43 PM Ticket #449 (Add support for follow-up blood samples to the blood registration wizard) created by Nicklas Nordborg
Most patients will have follow-up blood samples taken 6, 12 and 36 …
3:37 PM Ticket #448 (Register comments for blood samples) created by Nicklas Nordborg
It should be possible to register comments for the blood samples. The …
3:35 PM Ticket #447 (The HE glass registration wizard should have a field for the number of ...) created by Nicklas Nordborg
The typical workflow is that a number of slides are created before …
3:28 PM Ticket #446 (The Paraffin block registration wizard should have comment fields) created by Nicklas Nordborg
See also #445. This is the same comments that can be edited in step 2 …
3:25 PM Ticket #445 (The HE glass registration wizard should have comment fields) created by Nicklas Nordborg
There should be one comment field for the paraffin block in the second …
3:19 PM Ticket #444 (The 'Plasma/serum' checkbox should be checked by default in the blood ...) created by Nicklas Nordborg

Dec 6, 2012:

4:54 PM Ticket #439 (Missing sample data report) closed by olle
fixed: (In [1772]) Fixes #439. First version of missing sample data report added.
4:54 PM Changeset [1772] by olle
Fixes #439. First version of missing sample data report added.

Dec 5, 2012:

12:48 PM Changeset [1771] by Nicklas Nordborg
References #425: Generate a lab protocol for RNA -> cDNA processing …
12:46 PM Changeset [1770] by Nicklas Nordborg
References #424: Select RNA items for library preparation Fixed …

Dec 4, 2012:

12:35 PM Changeset [1769] by Nicklas Nordborg
References #424: Select RNA items for library preparation Added …
10:34 AM Ticket #437 (Rules for comparing 'sampling date' and 'RNA later' date should be the same) closed by Nicklas Nordborg
fixed: (In [1768]) Fixes #437: Rules for comparing 'sampling date' and 'RNA …
10:34 AM Changeset [1768] by Nicklas Nordborg
Fixes #437: Rules for comparing 'sampling date' and 'RNA later' date …
9:27 AM Ticket #442 (Allow pathology and blood registration wizards to save patients ...) closed by Nicklas Nordborg
fixed: (In [1767]) Fixes #442: Allow pathology and blood registration wizards …
9:27 AM Changeset [1767] by Nicklas Nordborg
Fixes #442: Allow pathology and blood registration wizards to save …
8:28 AM Ticket #443 (Sample count report should allow selection of "no specimen" items) closed by olle
fixed: (In [1766]) Fixes #443. Sample count report generator updated to allow …
8:28 AM Changeset [1766] by olle
Fixes #443. Sample count report generator updated to allow the user to …
8:15 AM Ticket #443 (Sample count report should allow selection of "no specimen" items) created by olle
Sample count report should allow selection of "no specimen". Currently …
8:06 AM Ticket #442 (Allow pathology and blood registration wizards to save patients ...) created by Nicklas Nordborg
In a few cases, it has happened that the names are missing on the …

Dec 3, 2012:

4:40 PM Ticket #438 (Overview report) closed by olle
fixed: (In [1765]) Fixes #438. First version of overview report added.
4:40 PM Changeset [1765] by olle
Fixes #438. First version of overview report added.
4:33 PM Changeset [1764] by olle
Refs #738. Commit in changeset 1763 reverted, as wrong ticket number …
3:55 PM Changeset [1763] by olle
Fixes #738. First version of overview report.
12:27 PM Changeset [1762] by Nicklas Nordborg
References #441: Register cDNA plate as completed Added a simple for …
11:30 AM Ticket #441 (Register cDNA plate as completed) created by Nicklas Nordborg
This wizard is part of #422. The registration process should be …
10:50 AM Changeset [1761] by Nicklas Nordborg
References #424: Select RNA items for library preparation Added a …

Nov 30, 2012:

12:45 PM Changeset [1760] by Nicklas Nordborg
References #424: Select RNA items for library preparation Implemented …
9:27 AM Changeset [1759] by Nicklas Nordborg
References #440: Export data to files needed for mRNA/cDNA processing …
8:56 AM Ticket #440 (Export data to files needed for mRNA/cDNA processing) created by Nicklas Nordborg
This wizard is part of #422. It has yet to be determined exactly what …
8:43 AM Changeset [1758] by Nicklas Nordborg
References #436: Import mRNA quality control results Implemented a …

Nov 29, 2012:

2:57 PM Ticket #439 (Missing sample data report) created by olle
The reggie report generator should be updated to include a report on …
2:33 PM Ticket #438 (Overview report) created by olle
The reggie report generator should be updated to include an overview …
2:07 PM Ticket #437 (Rules for comparing 'sampling date' and 'RNA later' date should be the same) created by Nicklas Nordborg
The 'Specimen tube registration' wizard and the 'Pathology referral …

Nov 28, 2012:

1:35 PM net.sf.basedb.reggie.notes29 edited by Jari Häkkinen
Fixing typos (diff)
10:53 AM Ticket #436 (Import mRNA quality control results) created by Nicklas Nordborg
This wizard is part of #422. Once the fragmented mRNA plate has been …
9:41 AM Changeset [1757] by Nicklas Nordborg
Catching up on trunk revisions 1734 to 1756.
9:38 AM Changeset [1756] by Nicklas Nordborg
References #435: Depend on BASE 3.2 Forgot to update extensions.xml
9:33 AM Ticket #435 (Depend on BASE 3.2) closed by Nicklas Nordborg
fixed: (In [1755]) Fixes #435: Depend on BASE 3.2
9:33 AM Changeset [1755] by Nicklas Nordborg
Fixes #435: Depend on BASE 3.2
9:29 AM Ticket #435 (Depend on BASE 3.2) created by Nicklas Nordborg
The production server is running on BASE 3.2 now…
9:27 AM Changeset [1754] by Nicklas Nordborg
Preparing for future release Reggie 2.10
9:26 AM Milestone Reggie v2.9 completed
See Reggie extension page for more information.
9:25 AM PluginDownload edited by Nicklas Nordborg
Released Reggie 2.9 (diff)
9:19 AM reggie-2.9.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 2.9
9:18 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 2.9 (diff)
9:18 AM net.sf.basedb.reggie.notes29 created by Nicklas Nordborg
9:04 AM Changeset [1753] by Nicklas Nordborg
Tagging Reggie 2.9
9:03 AM Changeset [1752] by Nicklas Nordborg
Preparing for release of Reggie 2.9
8:45 AM Changeset [1751] by Nicklas Nordborg
Adding some @Override annotations to methods that override a …
8:10 AM Changeset [1750] by olle
Refs #434. JSP script samplereportgenerator.jsp in in …
8:05 AM Changeset [1749] by olle
Refs #434. Compiler warnings removed. Either by adding …

Nov 27, 2012:

3:37 PM Ticket #434 (Sample count report should allow selection of specimen or blood sample) closed by olle
fixed: (In [1748]) Fixes #434. Sample count report generator updated to allow …
3:37 PM Changeset [1748] by olle
Fixes #434. Sample count report generator updated to allow the user to …
3:23 PM Ticket #434 (Sample count report should allow selection of specimen or blood sample) created by olle
Sample count report should allow selection of specimen or blood …
1:35 PM Ticket #417 (Enable core biopsy 'C' suffix for all sites) closed by Nicklas Nordborg
fixed: (In [1747]) Fixes #417: Enable core biopsy 'C' suffix for all sites …
1:35 PM Changeset [1747] by Nicklas Nordborg
Fixes #417: Enable core biopsy 'C' suffix for all sites Fixed for the …
1:33 PM Changeset [1746] by Nicklas Nordborg
References #422: Implement wizards for RNA->cDNA processing …
1:06 PM Changeset [1745] by Nicklas Nordborg
References #425: Generate a lab protocol for RNA -> cDNA processing …
12:46 PM Ticket #433 (Patient count report generator) closed by olle
fixed: (In [1744]) Fixes #433. First version of the patient count report …
12:46 PM Changeset [1744] by olle
Fixes #433. First version of the patient count report generator added.
11:56 AM Ticket #433 (Patient count report generator) created by olle
The reggie report generator should be updated to include a patient …

Nov 26, 2012:

9:10 AM Changeset [1743] by olle
Refs #421. JSP script samplereportgenerator.jsp in …

Nov 23, 2012:

2:48 PM Changeset [1742] by Nicklas Nordborg
References #424: Select RNA items for library preparation It should …

Nov 22, 2012:

9:13 AM Ticket #432 (The monthly operation list should include column headers) closed by Nicklas Nordborg
fixed: (In [1741]) Fixes #432: The monthly operation list should include …
9:13 AM Changeset [1741] by Nicklas Nordborg
Fixes #432: The monthly operation list should include column headers …
7:57 AM Ticket #431 (Add option for exporting PAT-id in the montly operation list) closed by Nicklas Nordborg
fixed: (In [1740]) Fixes #431: Add option for exporting PAT-id in the montly …
7:57 AM Changeset [1740] by Nicklas Nordborg
Fixes #431: Add option for exporting PAT-id in the montly operation list

Nov 21, 2012:

2:35 PM Ticket #432 (The monthly operation list should include column headers) created by Nicklas Nordborg
The export is currently generating a file with only tab-separated …
12:49 PM Ticket #431 (Add option for exporting PAT-id in the montly operation list) created by Nicklas Nordborg
It should be similar to the current "Specimen/NoSpecimen" …

Nov 20, 2012:

4:20 PM Changeset [1739] by olle
Refs #421. JSP script samplereportgenerator.jsp in …
3:04 PM Ticket #430 (Consent count report should allow time period selection) closed by olle
fixed: (In [1738]) Fixes #430. Refs #426. Consent count report updated to …
3:04 PM Changeset [1738] by olle
Fixes #430. Refs #426. Consent count report updated to allow a time …
2:22 PM Ticket #430 (Consent count report should allow time period selection) created by olle
Consent count report should allow time period selection, similar to …

Nov 16, 2012:

4:19 PM Ticket #428 (Reports should have sites in alphabetic order and a column with latest ...) closed by olle
fixed: (In [1737]) Fixes #428. Refs #420. Refs #426. Sample count report and …
4:19 PM Changeset [1737] by olle
Fixes #428. Refs #420. Refs #426. Sample count report and consent …
2:30 PM Ticket #429 (Blood samples should store sampling date as creation date) closed by Nicklas Nordborg
fixed: (In [1736]) Fixes #429: Blood samples should store sampling date as …
2:30 PM Changeset [1736] by Nicklas Nordborg
Fixes #429: Blood samples should store sampling date as creation date
2:21 PM Ticket #429 (Blood samples should store sampling date as creation date) created by Nicklas Nordborg
The blood sampling date is currently stored as an annotation …
1:28 PM Changeset [1735] by olle
Refs #428. Refs #420. Refs #426. Sample count report and consent count …
7:44 AM Ticket #428 (Reports should have sites in alphabetic order and a column with latest ...) created by olle
General update for all reports: * All reports should show sites in …

Nov 15, 2012:

8:39 AM Ticket #427 (Re-organize jsp files into subfolders) created by Nicklas Nordborg
All jsp files are currently located in a single folder which is …

Nov 14, 2012:

3:47 PM Changeset [1734] by Nicklas Nordborg
References #422: Implement wizards for RNA->cDNA processing Added …
9:09 AM Changeset [1733] by Nicklas Nordborg
Creating branch for working with ticket #422 and related sub-tickets.
Note: See TracTimeline for information about the timeline view.