Timeline



Sep 23, 2009:

11:38 AM PluginDownload edited by Jari Häkkinen
Updated BASE 1 download link. (diff)
11:08 AM Changeset [1164] by Jari Häkkinen
Fixes #247. A work around for the erroneous export from exportPlainMatrix.
11:08 AM Ticket #247 (net.sf.basedb.normalizers: qQuantileNormalization crashes when ...) closed by Jari Häkkinen
fixed: (In [1164]) Fixes #247. A work around for the erroneous export from …
11:02 AM Ticket #247 (net.sf.basedb.normalizers: qQuantileNormalization crashes when ...) created by Jari Häkkinen
When qQuantiler normalizes bioassay sets where assays have been …

Sep 22, 2009:

1:52 PM Changeset [1163] by Nicklas Nordborg
References #242: Implement "Save to BASE" function in the MeV gui The …
9:05 AM Ticket #246 (Add MeV Analysis file to list of MIME types) closed by Nicklas Nordborg
fixed: (In [1162]) Fixes #246: Add MeV Analysis file to list of MIME types
9:05 AM Changeset [1162] by Nicklas Nordborg
Fixes #246: Add MeV Analysis file to list of MIME types
8:16 AM Ticket #246 (Add MeV Analysis file to list of MIME types) created by Nicklas Nordborg
The analysis file is actually a zip file with a .anl extension.

Sep 18, 2009:

4:18 PM Ticket #245 (net.sf.basedb.illumina: Detection P-value fails if there is no ...) created by Jari Häkkinen
The plug-in returns with Status: Error: -1 The plug-in should return …

Sep 16, 2009:

8:57 AM Changeset [1161] by Nicklas Nordborg
Fixes #241: Add MeV Analysis file as a file type for bioassay sets …
8:57 AM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) closed by Nicklas Nordborg
fixed: (In [1161]) Fixes #241: Add MeV Analysis file as a file type for …

Sep 15, 2009:

2:37 PM Ticket #243 (Create a sample MeV analysis file for testing purposes) closed by Nicklas Nordborg
fixed: The test files (one tdms file and one analysis file) can be found in …
2:28 PM Changeset [1160] by Nicklas Nordborg
References #241: Add MeV Analysis file as a file type for bioassay …
1:22 PM Changeset [1159] by Nicklas Nordborg
References #241: Add MeV Analysis file as a file type for bioassay …
12:51 PM Changeset [1158] by Nicklas Nordborg
Checking in the .classpath file for Eclipse since it is so boring to …
12:46 PM Changeset [1157] by Nicklas Nordborg
References #241: Add MeV Analysis file as a file type for bioassay …

Sep 14, 2009:

1:44 PM Changeset [1156] by Nicklas Nordborg
References #241: Add MeV Analysis file as a file type for bioassay …

Sep 11, 2009:

2:02 PM se.lu.onk.IlluminaSNPNormalization edited by markus
(diff)

Sep 9, 2009:

10:48 AM Ticket #244 (Create a SAM plug-in) created by Jari Häkkinen
SAM is available in MeV but it would be nice to have it as an …

Sep 4, 2009:

9:08 AM Ticket #125 (MeV ... files are now supported (by the BASEcore) in the BASE analysis tree) closed by Nicklas Nordborg
duplicate: Replaced by #241, #242 and #243.
9:07 AM Ticket #243 (Create a sample MeV analysis file for testing purposes) created by Nicklas Nordborg
This is needed by #241 and #242. This ticket replaces #125.
9:03 AM Ticket #242 (Implement "Save to BASE" function in the MeV gui) created by Nicklas Nordborg
For background info see #241. We should investigate and try to …
9:00 AM Ticket #241 (Add MeV Analysis file as a file type for bioassay sets) created by Nicklas Nordborg
The scenario is this. A users uses the MeV extension to export and …

Aug 31, 2009:

1:03 PM Changeset [1155] by Nicklas Nordborg
Changes for future release 1.5
1:02 PM Milestone MeV Launcher v1.4 completed
Update to MeV 4.4. For more information see the …
1:00 PM net.sf.basedb.mev edited by Nicklas Nordborg
Releasing: MeV Launcher 1.4 (diff)
12:56 PM mev-launcher-1.4.tar.gz attached to net.sf.basedb.mev by Nicklas Nordborg
MeV Launcher 1.4
12:55 PM Changeset [1154] by Nicklas Nordborg
Tagging MeV launcher 1.4
12:54 PM Changeset [1153] by Nicklas Nordborg
Preparing release of "MeV launcher 1.4"
11:48 AM Changeset [1152] by Nicklas Nordborg
Preparing for future release 1.3
11:47 AM Milestone Extension examples v1.2 completed
For more information see [wiki:net.sf.basedb.examples.extensions?
11:45 AM PluginDownload edited by Nicklas Nordborg
(diff)
11:45 AM net.sf.basedb.examplecode edited by Nicklas Nordborg
Releasing: Extension examples 1.2 (diff)
11:42 AM extension-examples-1.2.tar.gz attached to net.sf.basedb.examplecode by Nicklas Nordborg
Example extensions v1.2
11:41 AM Changeset [1151] by Nicklas Nordborg
Tagging release 1.2
11:40 AM Changeset [1150] by Nicklas Nordborg
Preparing release of "Extension examples 1.2"

Aug 27, 2009:

11:22 AM net.sf.basedb.examplecode edited by Nicklas Nordborg
Adding links to changelog for each release (diff)

Aug 25, 2009:

2:33 PM Ticket #240 (Bead summary importer should have an option to fail if the number of ...) closed by Nicklas Nordborg
fixed: (In [1149]) Fixes #240: Bead summary importer should have an option to …
2:33 PM Changeset [1149] by Nicklas Nordborg
Fixes #240: Bead summary importer should have an option to fail if the …

Aug 24, 2009:

8:44 AM Ticket #240 (Bead summary importer should have an option to fail if the number of ...) created by Nicklas Nordborg
The current implementation only allows a user to fail on the first …
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